Dendrobium catenatum: 110106490
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Entry
110106490 CDS
T05027
Name
(RefSeq) probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase
KO
K14835
25S rRNA (cytosine2870-C5)-methyltransferase [EC:
2.1.1.310
]
Organism
dct
Dendrobium catenatum
Brite
KEGG Orthology (KO) [BR:
dct00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
dct03009
]
110106490
Enzymes [BR:
dct01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.310 25S rRNA (cytosine2870-C5)-methyltransferase
110106490
Ribosome biogenesis [BR:
dct03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
110106490
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Methyltr_RsmB-F
RsmF-B_ferredox
Methyltr_RsmF_N
TRM5-TYW2_MTfase
FtsJ
Methyltransf_31
DUF6058
Motif
Other DBs
NCBI-GeneID:
110106490
NCBI-ProteinID:
XP_020692079
LinkDB
All DBs
Position
Unknown
AA seq
625 aa
AA seq
DB search
MAKKQQKGGQREEKKKYNLSSKGPEDDLLGVVSDTEEVDEDESQASDIEDDQSESEVSSD
GDPFADDFLRDGDEEGRDDSGLESDESDLEAKSRAIDEAKAIALVEAEEELKLNIKEESD
EFRLPTKEELENEAKQPPNLQSLQRRIKEISRVLSNFKSLRQENTSRKEYLEQLKADLCS
YYGYNEFLIGSFMEIFPVVELVELLEALEKNRPETLRANTLKTRRRDLAAVLLNRGVNLD
AIGKWSKVGLVVYDSQVPIGATPEIMAGHYMRQGASSFLPVMALAPQEKERIVDMAAAPG
GKTTYIAALMKNTGIIYANEFKEKRLKSLTANIHRMGVTNTVVCNYDGKELPRILGSKSV
DRVLLDAPCSGTGIIWNEPSVKTSKAIEDIRNCAFLQKQLILAAIDLVDANSKSGGFIVY
STCSMMVEENEAVIDYALKKRDVQVVPCGLDFGRPGFIRFREHRFHVSLEKTRRFYPHVN
NMDGFFVAKLKKRSNSKLVTTEPSKASEEAGEGMDVENDLNEKTIKVSKMAMKQQNNEAS
KSSTLSDGKVTIQKKFVNVKQHKFKSVQKNIRKRNSRPAGSNQSNGKEYDKRSLGNAKKK
RKFPSREEISQAREEKRKALKKQKV
NT seq
1878 nt
NT seq
+upstream
nt +downstream
nt
atggctaagaagcagcagaaaggtggccaaagggaggagaagaaaaaatacaatctttca
tcaaaaggtcctgaagacgatcttctcggagtagtctccgacacagaagaagtggatgaa
gacgaaagccaggcatcagatatcgaagacgatcaatctgagtccgaggtatcatctgat
ggagaccccttcgctgacgacttcctccgagatggcgacgaagaggggcgagatgattcc
gggttggaatcggacgagtcggacctggaagcgaagtcgagagcgatagacgaggccaag
gcgatagctttggtggaagctgaggaggaattgaagttaaatataaaggaggagtcggac
gaatttagattgcccaccaaagaggagctagaaaatgaagccaagcagccaccaaacctt
caaagtttgcaaagaaggattaaagaaatttcccgcgtgctgtcaaatttcaagtctcta
aggcaggagaatacttctaggaaggagtatcttgaacagcttaaggctgatttatgctca
tattatggttacaatgaatttctcattggcagtttcatggagatattccccgttgttgag
cttgttgagctcttggaagctttggaaaagaatcgtcctgaaacactgcgagcaaatacc
ttgaagactcgcagaagggatcttgcagctgtccttcttaataggggagtaaaccttgat
gcaatagggaagtggtctaaggttgggctagttgtctatgattcacaagtgcctattggt
gcaactcctgagattatggctggtcactacatgagacaaggtgcaagttcatttctacct
gttatggcccttgccccgcaggaaaaggagcgaattgttgacatggctgctgctccaggt
ggcaaaacaacatatattgccgctctcatgaagaatactggtataatttatgcaaatgag
ttcaaggaaaagaggctgaagtcattaacagccaatatccatcgcatgggagtgacaaat
actgttgtgtgcaactatgatggaaaggagttgcccagaattttgggaagcaaatctgtt
gatagagtattgctggatgccccatgcagtggtactgggatcatatggaatgagccatct
gtcaaaacctctaaggccatcgaagatattcgaaactgtgcttttctgcaaaagcaactg
attttggcggcaattgacttagttgatgctaactcaaaatctggaggatttatagtctat
tcaacatgctccatgatggttgaagagaatgaggctgtgatagactatgctcttaagaag
agagatgtgcaggttgtaccctgtggattggactttggtcgccctggattcatacggttt
cgcgagcatcgctttcatgtgtcattggaaaagacaagaaggttctacccccatgtgaac
aacatggatggcttctttgtggctaagttgaagaagagaagcaattccaaactagtgact
accgaaccttccaaggcttctgaggaagcaggcgaaggaatggatgttgaaaatgaccta
aatgaaaagaccataaaagtctcaaagatggcgatgaagcagcaaaataatgaagcttct
aaaagcagcaccctaagtgatgggaaagttactatccaaaagaaatttgttaatgtaaaa
caacacaaatttaaatctgtccagaagaatattaggaagcgaaattcaagaccggcaggc
agcaatcaaagtaatggaaaagaatatgacaaaagaagcttgggcaatgccaaaaagaag
cgtaaattcccatcaagagaagaaatttctcaggctagggaagagaagagaaaagctctg
aagaagcaaaaagtttaa
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