Dendrobium catenatum: 110106603
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Entry
110106603 CDS
T05027
Name
(RefSeq) multisubstrate pseudouridine synthase 7
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
dct
Dendrobium catenatum
Brite
KEGG Orthology (KO) [BR:
dct00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dct03016
]
110106603
Enzymes [BR:
dct01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
110106603
Transfer RNA biogenesis [BR:
dct03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
110106603
Prokaryotic type
110106603
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TruD
PUS7L_N
R3H_PUS7L
Motif
Other DBs
NCBI-GeneID:
110106603
NCBI-ProteinID:
XP_028549259
LinkDB
All DBs
Position
Unknown
AA seq
734 aa
AA seq
DB search
MRGANFSISLTPCFIPFSPKPCHPTKPFANTFETLAMAKSVDESDVGIYCYVSSLPGFRA
VLKQRYSDFIVNEVDLDGNIVRLTSFDLPPKCSKEEERKASSDQKCFTDEIELFQTLAGE
ANAKLLKEFLEKVASTVGDELPPIVLAPDSDKSHRTEVHNFFKTNFKFLVTDTVDGEDGN
SKCVRIRFSSGKGVKGRGGRKRKDMENSGRKNDIPFDSRGTDNWPEERGKFLRFNLYKEN
KDTHEALGVIGKMLGIQQRSFGFAGTKDKRAITTQRVTVFKLHPERLAALNCRLFGIKVG
DFCFLKKGLLLGQLLGNRFTITLRGVVAASVDTINAAADGLGRSGFINYYGLQRFGSGSV
PTHSIGAALLRGEWKTAVDLILDPRDGERADIKEARKKYKKTGNADLVLSQLPRYLVAER
AIIQCLKNCPGNYLQALQGIPRTLRLMYVHSYQSYLWNHAASMRVRKHGTAQVVVGDLVF
CKGPISEKVASFESVEPIYEYHDGEGNNSLLDISDVALPEEKIQLVKTINSDDLISGGYT
FEDVVLPLPGSRTIYPGNDIAGIYHDISKKDGVSLTESVHGVKEFSITSMTGDYRRVFQR
PIDYTWELLTYTDNNESLAKTDMDILVGSKNTDLVTNKSSINTSPDDKDSLQTRKRGGSD
CFMSEDQNGVTAPAECDYSDPKVALKLGFTLPASCYATMAIRELLKSSTLVSIYISVLNA
KKSEILYISKRTSG
NT seq
2205 nt
NT seq
+upstream
nt +downstream
nt
atgaggggggcaaacttctccatctctttgactccatgctttatccccttctccccaaaa
ccctgccaccccacaaaacccttcgctaacactttcgaaaccctcgccatggcgaaatct
gtggatgagtccgacgtcggcatctattgctacgtctcttccctgcccggcttccgggct
gttcttaagcagaggtactcggatttcatcgttaatgaggtggatctcgacgggaacatt
gttcgcttaacctcctttgatttgccgcctaagtgttctaaagaggaggaaagaaaagct
tcttcggatcaaaagtgcttcacagatgagattgaattatttcaaacccttgctggagaa
gctaatgctaaactgttgaaggaattccttgaaaaggttgcatccactgtgggtgatgag
ttgccccccattgttcttgctccagactctgataagtcccaccgtactgaggttcataat
ttcttcaagacaaatttcaaattccttgtaacagatacagtggatggagaggatggcaat
tccaagtgcgttaggattagattctcttctggtaaaggtgtaaagggtaggggagggagg
aagaggaaagatatggagaattcaggaaggaaaaatgacattccttttgatagcaggggt
acagataattggcctgaggagcgaggcaagttcctacggtttaatctttacaaggagaat
aaagacacccacgaggctttgggggtcatagggaagatgctaggtatccagcaacgctcg
tttggatttgctggcactaaagataaacgcgccataacaactcaaagggtgactgtattt
aagctgcatccagaaaggttagctgctctcaattgcagattgtttggcattaaagttgga
gacttttgttttttgaagaaaggacttcttcttggtcagctactaggaaataggtttaca
attactttgagaggtgttgttgcagcttcagtagatactataaacgcagctgctgatggt
ttaggaaggagtggttttatcaattattatggtctgcagcggtttgggagtggttcagtg
ccaactcattcaattggagctgctctccttcgtggagagtggaagactgctgtagatttg
atacttgatccaagggacggggaaagagctgacattaaagaggcgcggaagaagtacaag
aaaactggtaatgctgatttggtgttaagtcaactacctcgttatttggttgctgagaga
gctattatacagtgtttaaaaaattgcccgggcaactatttgcaggctctgcagggaata
cctaggacacttagactaatgtatgtgcatagttatcaaagttatttgtggaaccatgct
gcgagtatgagagtacgaaaacatggtactgcacaggttgtggttggagatttggtcttt
tgcaagggtcctatttctgagaaagttgcttcttttgagagcgttgaaccaatatatgaa
tatcatgatggagagggcaataatagtttacttgatatatctgatgtcgcacttcctgag
gaaaagattcagcttgttaagactataaattctgatgatctgattagtggtggttataca
tttgaagacgttgtacttcctttgcccggatcaaggactatatatccgggcaatgatata
gctggaatttatcatgatatatctaagaaggatggtgtaagcttgacagaaagtgttcat
ggtgttaaggaattctctattactagcatgacgggagattataggcgtgtttttcagcgt
cctatagattatacttgggagttgctaacttatacagataacaatgaatccttggcaaaa
acagatatggatatcttggttgggtcaaagaacactgatttggtgacaaacaagagttct
attaatacaagtccggatgacaaagactctctgcagactagaaaacgtggtggttctgat
tgttttatgtctgaggatcaaaatggggtgactgcaccagcggagtgtgattattctgat
ccaaaggtggccttgaagttgggctttactcttcctgcttcatgttatgccacaatggcc
atcagagagctacttaagtcatcaactttggtttcaatctatatcagtgttctaaacgca
aagaagtccgaaatactatatatcagtaaaagaacttctggttaa
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