Dendrobium catenatum: 110106692
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Entry
110106692 CDS
T05027
Name
(RefSeq) BRCA1-associated RING domain protein 1 isoform X1
KO
K10683
BRCA1-associated RING domain protein 1
Organism
dct
Dendrobium catenatum
Pathway
dct03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dct00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
110106692
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dct03019
]
110106692
04121 Ubiquitin system [BR:
dct04121
]
110106692
03036 Chromosome and associated proteins [BR:
dct03036
]
110106692
03400 DNA repair and recombination proteins [BR:
dct03400
]
110106692
Messenger RNA biogenesis [BR:
dct03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
110106692
Ubiquitin system [BR:
dct04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
110106692
Chromosome and associated proteins [BR:
dct03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
110106692
DNA repair and recombination proteins [BR:
dct03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
110106692
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BRCT
zf-HC5HC2H
RTT107_BRCT_5
zf-C3HC4_3
zf-RING_6
zf-HC5HC2H_2
BRCT_2
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_4
zf-RING_UBOX
zf-RING_10
zf-RING_4
Mtrc-MtrF_II-IV_dom
zf-RING_5
PTCB-BRCT
zf-RING_2
PHD_NSD
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
110106692
NCBI-ProteinID:
XP_020692326
LinkDB
All DBs
Position
Unknown
AA seq
608 aa
AA seq
DB search
MASSESEGISRLLNPFVLHLKKLELELNCPTCLNILNQPMLLPCDHILCSSCNGISINDG
YSCPNCRQPYEQKDLRPATHIEKFLTIYKNMSSAISSLQRSSSFDFFGLDVPTPISCNNN
LEKKRTHFTGADNFVDQIQLSPSIDNFRDSDSDSWDEGQLAVKRKFADMSPEEGSNCGTK
HTKFNDSVELNDQLKNVSMGGNTKADLDGSTIETCIFCHSFRNTEASGEMLHYLNGEQIF
ENQASQPNVLHVHRKCIDWAPQVYYSGEKVVNLEAELARSSKIKCCSCGLKGAALGCYVK
SCKRSFHVPCAYQILECRWDTENYLVLCPTHASRRLPCDKPKTKKSNSALVEPLVSSDYD
TLSNAKRPHTIWMSSSSLSKDWMICGSDLSKDEKVILEKFARLSGVLVTYQWKQNVTHVI
AATNEDGACIRTMKYLMAILNGRWVLNMGWIKACLEAEHLVPEENYEITHDTYDCINGPK
NGRIRAMQKSPKVFNRLAFHFSGFFEPSYKCNLENLATEAGGQVLSKFQLQNLSSSIPSS
VAGEIEKTLIVYSVEPPKDSNPSKIDRVLQERLETAEALALKVGIVVRHTVFLNAIAAND
LQMLYEKS
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
atggcatcttccgagtccgagggcatcagtcgactgctgaacccattcgtcctccatctg
aagaagttggagttggagctcaactgcccgacctgcttgaatattttgaaccaaccgatg
ttgttgccttgtgatcatattttgtgcagttcttgtaatgggatatcaataaatgatggc
tacagttgtcctaattgcagacaaccttatgaacaaaaagatttgaggcctgccactcat
attgaaaagtttcttactatttacaaaaacatgagttcagctatatcatctttgcagcga
agttcttcatttgacttttttggcttggatgtacctactcccatctcatgcaacaacaat
cttgagaagaagcgcactcattttactggagctgacaattttgttgatcaaatacaatta
agtccttcaattgataattttagagattctgatagtgacagttgggatgaagggcaactt
gctgtaaagaggaagttcgctgatatgtcaccagaggaaggctctaactgtggcactaag
catacaaagttcaatgattctgtagagttgaatgatcagttgaaaaatgtctcgatggga
gggaataccaaagctgatttggatggaagtaccattgagacttgtatattttgtcattcc
ttcagaaatactgaggcttctggagaaatgctacattatttgaatggagaacaaatattt
gaaaatcaagcctcacaacctaatgtcctacatgtgcatcgtaaatgcatagattgggct
cctcaagtatattattctggtgagaaggttgtgaatttggaggctgaacttgcacgttct
tccaagattaaatgttgtagttgtggattgaagggagctgctcttggttgctatgtcaag
agctgtaaaagaagcttccatgttccatgtgcatatcaaatactagaatgtcgctgggat
actgaaaattatcttgtgctctgtccgactcatgcttcgaggagattaccttgtgacaaa
ccgaagacaaagaaatctaatagtgcattagtcgagcctttggtttcatcggattatgat
acattatctaatgcaaaacgacctcacacaatttggatgtcctcatctagtctaagcaag
gattggatgatttgtggatctgatctatccaaggacgagaaggtaattttggagaaattt
gctagattgagtggtgtgctggtaacttatcaatggaagcagaatgtgacccatgtcatt
gccgctacaaatgaggatggagcctgcatcagaacaatgaagtatctcatggctattctg
aatggtagatgggttctaaatatgggctggatcaaagcatgcttggaagctgaacacctt
gttcccgaagagaattatgagatcactcatgatacctatgattgcatcaatggcccaaaa
aatggaaggattcgagccatgcaaaagtctccaaaggttttcaacagactagctttccac
ttcagtggtttcttcgaaccttcctataaatgtaacctggaaaaccttgcaactgaagct
ggaggccaggttttaagcaagtttcagttgcagaacttgagctcgagcatcccttcctca
gttgctggagagattgaaaaaacattaatcgtttattctgttgaacctcccaaggattcc
aatccttcgaaaatcgacagagtattacaagagaggcttgagactgcagaggcattagct
ctgaaggtaggaattgttgttcgtcatacagtattccttaatgctattgctgctaatgat
ctacaaatgttgtatgagaaatcatga
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