Dendrobium catenatum: 110106836
Help
Entry
110106836 CDS
T05027
Name
(RefSeq) CCR4-NOT transcription complex subunit 10
KO
K12607
CCR4-NOT transcription complex subunit 10
Organism
dct
Dendrobium catenatum
Pathway
dct03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dct00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
110106836
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dct03019
]
110106836
Messenger RNA biogenesis [BR:
dct03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
110106836
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_2
TPR_19
ARM_TT21
TPR_7
TPR_10
Motif
Other DBs
NCBI-GeneID:
110106836
NCBI-ProteinID:
XP_020692538
LinkDB
All DBs
Position
Unknown
AA seq
830 aa
AA seq
DB search
MDARDSSSIALGRDGSSEEEVFTAGLAKEAEVMFQSRRFEECVEVLNQLLPKKGSDPKVL
HNIAVAEYYRDGCSDPKHLLDVFNKVKKRSEELALAARDQTEVASIVGNNVNSISRGSSN
SLNQSAAADTVKVAYADEFGTSVVTFNTAAVLYHLHEYACALSFLEPLYYNIEPIDERTA
LHVCLLMLDIALASQDATRAADVIHYLERSFGVGYMTNQIDNGANPQHQSSNQGSKLSTS
NVGAPDASSSETIASSHVSENPLTGTLSDDSLEFENLYSTLDSGNQSLGRPVTDISKTTV
DRAVPGNDLKQKIHLYKVRLLLLTRNLKAAKREVKLAMNVARGRDSSAELLLKSQLEYAR
GNHRKAVKLLMTSMNKTEPVMLSMFNNNVGCIHYQLKSPHTSSLFFTKALKSSSSLRSEE
PLKLSTFSKDKSLLIIYNCGLQNLACGKPVTAAQCFGKASLYFYNKPVFWLRLAECCLLA
MEKGLLRPSAGDIKLHVAGSGKWRQLVLEEDVSSRSRYFKGVESVSGEDEQNKLSLPFAR
LCLHRALFLLDKLEKKVSRPSATIDSLQEDATQAKSIKSSGHKNALTGDPKAATAALVSM
TSITNGDYKENKGGLSPNTTLQSSVTTFEELCKEENSMIKQALLGNLAYVELCLENPLKG
LSAAKSLLQLPDCSKIYTFLGRMYAAEALCFLNRPKEAAEYLSIYFNENGKVELPYCDDD
REKWNLKRGMDGEELNGSQNARTMSDATRGGLLKPEEACALACVNLSIMFSLQGNLEQAS
QFMQKALSHLPKDPRVLLAGVYVDLLQQKPRDALAKLKLCNNIRYLSASS
NT seq
2493 nt
NT seq
+upstream
nt +downstream
nt
atggatgcacgggattcgtcgtcgattgctttgggaagggacgggtcttccgaggaggaa
gtcttcacggctggattggccaaggaggcggaggtaatgttccagagcaggagatttgaa
gagtgcgtcgaggttttgaatcaactcttgccgaagaagggaagcgatccgaaggttctt
cataacattgctgtggctgaatactaccgtgatggttgctctgatccaaaacatcttctt
gatgtatttaataaagtcaagaagagaagcgaagaacttgctcttgcagctagagatcaa
actgaagtggctagcatagttggaaataatgttaattctatatccaggggcagttccaat
tccctaaatcagtcggctgctgcagatactgttaaggtggcatatgcagacgagtttggc
acctctgttgtgacatttaacactgctgctgtgctctatcatttgcatgaatatgcatgt
gctttgtcatttctagagccattatattacaacatagaaccaatagatgagagaactgct
cttcatgtatgccttctaatgcttgacattgcattagcttcccaagatgcaactagagct
gcagatgtaattcattacttagaaaggtcttttggagttggctacatgacaaaccaaatt
gataatggtgccaatcctcaacaccaatcatcaaaccaaggttctaaactctccacttca
aatgttggtgcacctgatgcctccagctcggagacaatcgcaagcagccatgtttctgag
aacccccttactggaactttatcagatgattctcttgagtttgaaaacctgtactcaacg
ttagacagtggcaaccagagcctgggccgacctgtgactgatatttcgaaaacaactgta
gatcgagctgttcctggtaatgacctaaaacaaaaaatacatctttacaaggtacgcttg
ctgcttctcactaggaacctaaaggctgctaaacgtgaggttaaacttgcaatgaatgtg
gcacgaggtagagattcttcggcagaattgctcttgaagtctcaactagaatatgcccgt
ggtaaccatagaaaagctgtgaagcttttgatgacatccatgaataaaacagagccggtt
atgctgagtatgttcaacaacaatgttggatgcattcattatcaactcaaaagcccccac
acatcgtccttattctttacaaaggctctgaaaagtagttcatcgctgcggtcggaggaa
cctctgaagctgtcaaccttctctaaggacaaatctcttctaattatatataattgtggt
ctgcaaaacttggcctgtggaaagcctgtaactgcagctcagtgtttcggaaaagccagt
ttgtatttttacaacaagccagttttctggctccggttagctgagtgttgtctattagcc
atggaaaaagggcttttgagaccatctgctggggacataaaacttcatgttgcaggatcc
ggcaaatggcgacagctggtattggaagaagatgtcagctcaagaagtaggtatttcaaa
ggagtagaatccgtgtcaggtgaagatgagcaaaacaagctatcactcccattcgctagg
ctttgtcttcacagagccctgtttttgttggacaagcttgagaagaaagtatcaaggccc
agtgctacaattgattcattgcaggaagatgctacccaggccaaatctatcaagagctca
ggccataagaatgcattgactggagatccaaaggcagccactgcagcattggtttccatg
acttctatcaccaatggcgattataaagaaaataaaggtggattgagccccaacaccacc
ttgcagagttctgtgaccacttttgaagaattgtgcaaggaagagaacagcatgattaag
caggcccttttaggaaatctcgcttacgttgaattgtgcttagaaaacccacttaaagga
ttatctgcggcaaaatcacttctgcagctgccggactgttcaaaaatttatacctttctt
ggtcgtatgtatgctgctgaagcactttgtttcctgaatcgacctaaagaggctgcagaa
tatttgtcaatctatttcaatgagaatggtaaggtggagctgccttattgtgatgatgac
agagagaagtggaatttaaagagaggaatggatggtgaggagttaaatggttcacagaat
gctagaactatgtcagatgcaactcgcggcgggcttcttaagcctgaagaggcttgtgct
cttgcttgtgtaaatcttagtataatgttctctcttcaaggcaatcttgagcaggctagc
cagttcatgcagaaagctctctcacacttgcccaaggatccaagggttttgcttgccggg
gtttatgtggatcttctgcaacagaaaccacgagatgctcttgccaagttgaagctttgt
aacaacatcaggtacctttcagcttcttcatga
DBGET
integrated database retrieval system
