KEGG   Dendrobium catenatum: 110107091
Entry
110107091         CDS       T05027                                 
Name
(RefSeq) coatomer subunit beta'-1 isoform X1
  KO
K17302  coatomer subunit beta'
Organism
dct  Dendrobium catenatum
Brite
KEGG Orthology (KO) [BR:dct00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:dct04131]
    110107091
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:dct04147]
    110107091
Membrane trafficking [BR:dct04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Retrieval pathways
   Coat protein complex I (COP-I)
    110107091
Exosome [BR:dct04147]
 Exosomal proteins
  Exosomal proteins of colorectal cancer cells
   110107091
SSDB
Motif
Pfam: B-prop_COPA_B_2nd TPR_COPA_B WD40 WD40_Prp19 WD40_WDHD1_1st WDR55 Beta-prop_EML_2 WD40_CDC20-Fz Beta-prop_TEP1_2nd Beta-prop_WDR75_1st Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd Beta-prop_EML EIF3I Beta-prop_EIPR1 Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_C WD40_MABP1-WDR62_1st Beta-prop_SCAP Beta-prop_RIG_2nd Beta-prop_IFT140_1st Beta-prop_HPS5 WDR90_beta-prop_4th NBCH_WD40 Beta-prop_DCAF4 Beta-prop_SPT8 WD40_RFWD3 Beta-prop_Nup120_160 Beta-prop_IFT122_1st PEP5_VPS11_N WD40_like Beta-prop_WDR35_TULP_N WD_LRWD1 PH_SPO71 TPR_GEMI5 Beta-prop_DCAF12
Other DBs
NCBI-GeneID: 110107091
NCBI-ProteinID: XP_020692898
LinkDB
Position
Unknown
AA seq 910 aa
MPLRLEIKRKLAQRSERVKSVDLHPTEPWILASLYSGSVCIWNYQSQTMVKSFEVSELPV
RSAKFIARKQWVVSGADDMLIRVYNYNTMDKAKVFEAHTDYIRCVAVHPTLPYLLSSSDD
MLIKLWDWDKGWTCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFT
LDAHLKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVSFHPE
LPIIITGSEDGTLRIWHATTYRLENTLNYGLERVWALGCMKGSRRVVIGYDEGTIMIKLG
REVPAASMDNSGKIIWAKHNEIQTVNIKTVGSDIEINDGERLPLAVKELGSCDIYPQSLK
HNPNGRFVVVCGDGEYIIYTALAWRNRSFGPALEFVWSSDGEYAARESTSRVKIFSKTFQ
EKKSVRPTFSAERIFGGTLLAMCSNDFICFYDWAECRLIRRIDVNVKNLYWADSGDLVTI
ASDSSFYILKYNKDTVSSHVENGNPADEQGVEDAFELLHEINERVRTGIWVGDCFIYNNS
SWRLNYCVGGEVTTMFHLDRPMYLLGYLANQSRVYLIDKEFNVIGYTLLLSLIEYKTLVM
RGDLDRAKEVFPLIPKEHLNSVAHFLESQGMLEDALEVATNPNYRFDLSIQLGKLEVAKA
IAVESQSESKWKQLGELAMSTGKLEMAEDCLSNAMDFSGLLLLYSSLGDAEGIRKLASLA
KEQGKNNVAFICLFMLGKLEDCIQLLVESNRIPEAALMARSYLPSKVSEIVAIWKSELNK
VNPKAAESLADPEEYPNLFENWQIALAVESSLASKRGGYPPAEEYLNHAEETNINLVEAF
KNTQVDEEGLLGEYGDSDYAGRVENKERAEQEQEVEADDSTNGAVLVHLNDDEEDGGTNN
KGIPAVSHSN
NT seq 2733 nt   +upstreamnt  +downstreamnt
atgcctctccgattggaaatcaagaggaaacttgcgcagaggtctgaaagagtgaaatcg
gtggacttgcatcctacagagccatggattcttgcaagtctttactctggaagtgtgtgc
atttggaattatcagtcacagacaatggtgaaatcttttgaagtatctgaattgccagtg
cgatcagcaaagttcatagcacgcaagcagtgggttgtgtccggagcagatgatatgctc
attcgtgtgtacaactacaacacaatggacaaggctaaagtgtttgaggcgcacacagat
tatattaggtgtgtggctgtccatccaacattgccttatctgctgtcatcatcagatgac
atgttgatcaagctttgggattgggataaaggatggacatgtactcagatttttgaagga
cactcccactatgttatgcaagtaacttttaatccgaaggatactaatacttttgcaagt
gcttcccttgatcgcacaataaagatttggaaccttggttcgccagatccaaattttact
ttggatgctcatttgaagggagtgaattgtgttgattactttaccggcggtgataagcca
tatttaatcactggttctgatgatcacactgcaaaggtatgggattatcaaactaagagt
tgcgtccaaactctagaaggtcatacgcacaatgtatcggccgtcagtttccatcccgag
cttccaataataataactggatctgaggatggaactcttcggatatggcatgctaccact
tataggcttgagaatacgctaaattatggtctcgagcgagtttgggctttaggatgcatg
aaaggctcaagaagggttgtaattggatatgatgaaggaactataatgataaagcttggg
cgcgaagtgccagctgccagcatggacaatagtggaaaaattatatgggcaaagcataat
gagattcaaacagtgaatatcaagacagtcggatcagacattgagataaatgacggtgaa
agattgcccttggctgtgaaagagttgggaagctgtgatatttatcctcaaagcctgaag
cataacccgaatggaaggtttgttgtcgtttgtggagatggagaatacattatatacact
gcattggcttggagaaatagatcctttggacctgctttggagtttgtttggtcatcagat
ggggaatatgcagctagagaaagtacatcaagagtaaagatttttagtaaaactttccag
gagaagaaaagtgttcgaccaaccttttctgcagaacgcatttttgggggaactttattg
gctatgtgctctaacgatttcatttgcttctatgattgggctgaatgtagactgatacgc
agaattgatgtgaatgtcaaaaacctctactgggcagacagtggtgatttggttacaatt
gccagcgattcatcattctatatcttgaagtacaataaagatactgtttcttcacatgtt
gaaaatggaaacccagctgatgagcaaggtgttgaggatgcgtttgagctacttcatgaa
ataaatgagcgtgtccgaactggaatttgggttggagactgtttcatttacaataactcc
tcttggcgactgaattattgtgttggtggagaggttacaaccatgttccacttggatcgg
cctatgtacttgctaggatatttggctaaccaaagtcgtgtatatcttattgacaaggag
ttcaatgttataggttacacgttgcttcttagcttgattgagtacaaaactcttgtgatg
cgtggggatttggaccgtgcaaaagaagtttttccattgattccaaaggaacatcttaat
agtgtggctcacttcttagagtctcaaggcatgctagaggatgctttagaagtggccaca
aatcctaattatcgttttgatttatcaattcagttgggaaagttagaggttgcaaaggca
attgcagttgaatcacaaagtgagtccaagtggaaacagcttggagaattagccatgtct
accggaaagttagagatggctgaggattgtttatcaaatgctatggatttcagcggctta
ttacttctttattcttctcttggagacgctgaaggaattagaaaacttgcaagtctcgct
aaagagcaagggaagaacaatgttgccttcatatgtttatttatgcttggtaaattggag
gactgtattcaattgttggtagagagtaaccgtatacctgaagctgcactgatggcgcgg
tcctatcttccaagcaaagtctccgagattgtggcaatatggaaaagtgaactcaataag
gtcaaccccaaagctgcagagtcattggcagatcctgaggagtatccaaacttatttgag
aattggcagattgctcttgcagttgagtctagccttgccagtaaaaggggtggatatcct
cctgcggaagagtatttaaatcatgctgaggagacaaatattaatctagtggaggctttc
aaaaacactcaagttgatgaagaagggttgctaggtgaatacggagactcggattatgcg
ggaagggtagagaataaagagcgtgcagaacaggaacaggaagttgaagcagatgattct
accaatggtgctgtcctagtccatctgaatgatgatgaggaagacgggggtacaaataac
aaaggaatcccagcagtctctcactccaattaa

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