Dendrobium catenatum: 110107613
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Entry
110107613 CDS
T05027
Name
(RefSeq) WD-40 repeat-containing protein MSI4
KO
K10752
histone-binding protein RBBP4
Organism
dct
Dendrobium catenatum
Pathway
dct03082
ATP-dependent chromatin remodeling
dct03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
dct00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
110107613
03083 Polycomb repressive complex
110107613
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
dct03036
]
110107613
Chromosome and associated proteins [BR:
dct03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
110107613
Histone modification proteins
HAT complexes
HATB complex
110107613
HDAC complexes
Sin3A-HDAC complex
110107613
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
110107613
PRC2.2
110107613
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
110107613
Heterochromatin formation proteins
Other heterochromatin formation proteins
110107613
Chromatin remodeling factors
NuRD complex
110107613
NuRF complex
110107613
NuRF complex (fruit fly)
110107613
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
CAF1C_H4-bd
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
Beta-prop_EML_2
Beta-prop_TEP1_2nd
WD40_WDHD1_1st
Beta-prop_RIG_2nd
Beta-prop_EML
EIF3I
WDR55
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
eIF2A
WD40_RFWD3
Beta-prop_SPT8
Beta-prop_DCAF12
ANAPC4_WD40
Beta-prop_WDR35_TULP_N
Motif
Other DBs
NCBI-GeneID:
110107613
NCBI-ProteinID:
XP_020693558
LinkDB
All DBs
Position
Unknown
AA seq
468 aa
AA seq
DB search
MKERGKAGQRSVDERYTQWKSLVPVLYDWLANHNLVWPSLSCRWGPQVEHATYKNRQRLY
LSEQTDGSVPNTLVIANCDVVKPRVAAAEHISQFNEEARSPFVKKFKTIIHPGEVNRIRE
LPQNSKIVGTHTDSPDVLIWDVEAQPNRHAVLGAAPSRPDLVLTGHQENAEFALSMCPIE
PLVLSGGKDMSVVLWSIQDHISTLGVASDAKSLEASSGSSGGKQAAKAGNNKSSDSPTVA
PRGVYQGHEDTVEDVQFCPTSAEEFCSVGDDSCLILWDARAGTSPVVKVEKAHNSDLHCV
DWNPHDVNFILTGSADNSVRMFDRRNLSSGGIGSPVHKFEGHSAAVLCVQWSPDKASVFG
SAAEDGFLNVWDHEKVGKKRERSGTRTTNSPPGLFFQHAGHRDKVVDFHWNASDPWTIVS
VSDDCQSTGGGGTLQIWRMSDLIYRPEEEVLEELEKFKSHILTCAPKT
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atgaaggaaagaggcaaagcggggcagcgttccgtggacgaaaggtatacccagtggaaa
tccctcgttcccgtgctctatgactggctcgccaatcacaacctcgtgtggccctcgctc
tcgtgccgctggggtcctcaagtggagcatgcaacttacaagaatcgtcaacgtctttac
ctatctgaacagactgatggcagcgttccaaatactcttgtgattgccaattgtgatgtt
gtaaaaccaagagttgcagctgcagaacatatttcacagttcaatgaagaagcacgctca
ccatttgtgaaaaagtttaaaactatcattcatcctggggaggtcaacagaatcagggag
ctccctcaaaatagtaagatcgtggggactcataccgacagtcctgatgtgcttatttgg
gatgttgaggctcagcctaatcggcatgctgtgcttggtgctgctccatcacgcccggat
ttggtgctgacagggcatcaagaaaatgcagagtttgctctttctatgtgccccattgag
cctcttgttctttcaggaggcaaggacatgtcagtcgtattgtggagtatacaagatcat
atctctaccctaggagtggcttcggatgctaaatctctagaagcatcttctgggagttct
ggtggtaagcaggctgcaaaagctggtaacaacaagtcctcagacagtccgactgttgca
ccacgaggggtgtaccaaggacatgaagataccgttgaagatgtgcagttctgtccaact
agtgctgaggaattttgtagcgtcggtgatgattcttgtctcattttgtgggatgctcgt
gccggtaccagtcctgtcgtaaaggttgagaaagctcataattctgatcttcactgtgta
gactggaatccccatgatgttaattttattttgactggatctgctgataattctgttcgt
atgtttgatcggcggaatctttcttccgggggcattggttctcccgttcataaatttgaa
ggccactctgctgctgttctttgtgtgcagtggtctccagacaaagcatcagtttttggg
agtgctgctgaggatggttttttgaatgtttgggatcatgagaaggttgggaaaaagaga
gagaggagcggtacaaggactactaactccccccccggtttgttctttcaacatgcgggg
catagagataaagtggttgattttcattggaatgcatctgatccatggaccattgttagc
gtatctgatgactgtcagagcactggtggcggtggaacactgcagatatggcgcatgagc
gacttaatttacaggccggaagaggaagttctggaggagctggagaagttcaagtcccat
atcctcacctgcgctcccaagacctga
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integrated database retrieval system
