Dendrobium catenatum: 110107793
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Entry
110107793 CDS
T05027
Name
(RefSeq) probable 28S rRNA (cytosine-C(5))-methyltransferase
KO
K15264
25S rRNA (cytosine2278-C5)-methyltransferase [EC:
2.1.1.311
]
Organism
dct
Dendrobium catenatum
Brite
KEGG Orthology (KO) [BR:
dct00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
dct03009
]
110107793
Enzymes [BR:
dct01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.311 25S rRNA (cytosine2278-C5)-methyltransferase
110107793
Ribosome biogenesis [BR:
dct03009
]
Eukaryotic type
Other ribosome biogenesis factors
110107793
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Methyltr_RsmB-F
Methyltransf_25
Ubie_methyltran
FtsJ
Methyltransf_31
PCMT
Methyltransf_4
RrnaAD
ASPP2-like_RA
Fibrillarin
Motif
Other DBs
NCBI-GeneID:
110107793
NCBI-ProteinID:
XP_020693830
LinkDB
All DBs
Position
Unknown
AA seq
266 aa
AA seq
DB search
MGKASSMVAVALCPKPGWKVLDACAAPGNKTSHLAALMKGKGKIIACEINKKRLVHLDDT
IRRSGAHNVEIIHCDFLDINASDRSFSKVRAILLDPSCSGSGTSAERLDHLLPSYSTDHQ
DEAAANGPRVRKLAAFQKKALAHALSFPAVERVVYSTCSIHQTENEDVVESVLPLATSLG
FELATPFPQWPLRGRPIFDGAERLLRTDPSQDTEGFFIALFVKKLRSLPPAQKKHFSPGR
KLPFFPTKISKIWMRHCMARRRRRNS
NT seq
801 nt
NT seq
+upstream
nt +downstream
nt
atggggaaggcaagttcgatggtggctgttgccttatgtccaaaaccgggatggaaggtt
cttgatgcttgtgctgctccaggcaacaaaacttctcaccttgctgcactcatgaaagga
aagggaaaaattatagcttgtgaaattaacaagaaaaggctcgtacacttggatgatact
atcagacggtcaggggcacataatgtagaaattatacattgtgattttttggatattaat
gccagtgaccgctcattttcaaaggtccgcgccattctgttggatccttcctgctctgga
tctggaacctctgctgaaagattagatcatctactcccatcatattcaacagatcatcaa
gatgaggctgccgccaatggtccccgggtgaggaagcttgcagcttttcaaaagaaggct
cttgctcatgcattatcctttccagcagttgaaagagttgtctacagcacatgttccatc
catcaaaccgagaacgaagatgtcgtcgagtctgttcttccattagccacctcgctcggc
ttcgaactggcaacccctttccctcagtggcctctacgtggccgccccatctttgacggc
gctgagcgtttgctgagaactgatccatcccaggatacagaaggatttttcattgcatta
tttgtcaagaagctcagatctcttcctccagcccagaagaaacatttcagtccaggaaga
aaattgccattttttcctaccaagatttcaaagatttggatgcgtcactgcatggcaagg
agaagaagacgcaactcataa
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