Dendrobium catenatum: 110107812
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Entry
110107812 CDS
T05027
Name
(RefSeq) RNA-binding KH domain-containing protein PEPPER
KO
K21444
poly(rC)-binding protein 3/4
Organism
dct
Dendrobium catenatum
Brite
KEGG Orthology (KO) [BR:
dct00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dct03019
]
110107812
Messenger RNA biogenesis [BR:
dct03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
110107812
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
KH_1
KH-I_KHDC4-BBP
KH_2
KH_KhpA-B
MOEP19
Ssb-like_OB
Motif
Other DBs
NCBI-GeneID:
110107812
NCBI-ProteinID:
XP_020693869
LinkDB
All DBs
Position
Unknown
AA seq
459 aa
AA seq
DB search
MAATTTGISGDISASLSDNKSDSPSSQPLESEEEGLEAEEEAPSNVEQINAADFESAASE
EVKKWPGWPGESVFRLVVPLMKVGSIIGRKGEHIKKICEETRARVRVLEGIIGTNERIVL
ISAKEEQDAELSPAMDAVLRVFKRVNDIPDGAEDGADQASAAASIGLLVASSQALNLIGK
QGTTIKSIQESTTATIRVLSGDELPHYATAGERIVEITGEYQKVLKALEAVVGHLRKFLV
HHSVLPLFEKFLTMPAAQDSEPEAWGEKTQALTHSSHTGIGKRDSLYLDHEYQFDSQFPH
SNLSLYGQDPALSGLRSSGMGLGRTAGALVTQVTQTMQIPLSYAEDIIGIGGDNIAYIRR
TSGAVLTVQETRGVPDEITVEIKGNASEVQKAQQIIQDFIAAHKGPAPSSYGSADTGLRS
SYSHFGGSSYSSSLSAASLSGYGSTGLGGYGSYRYGFSG
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atggcggcaaccacgacgggcatctctggcgacatttccgcgtctctatcggacaacaaa
agcgactctccatcatcgcagcctctcgaaagcgaggaagaggggttggaggccgaagag
gaggcgccctcgaatgtagaacaaattaacgcagccgatttcgagtctgcagcgtcagag
gaagtgaagaaatggccaggatggcccggggagagtgtcttccggctcgtcgtgccgctt
atgaaggttggaagcatcattggacggaagggggagcacatcaagaaaatatgtgaggag
acgcgcgctcgcgttcgcgtactcgaagggatcatcggtaccaacgaacgcattgttcta
atatctgccaaagaagaacaagatgccgaattatcacctgctatggatgcagtcttacga
gtatttaaacgagtcaatgacataccagatggtgcagaagatggtgcagatcaggcatct
gctgctgcttctattggcttattggtggcatcttcacaggctcttaacttaattggaaag
cagggcacaacgatcaagtctattcaggagagtactactgcaaccatacgagtcctatct
ggagatgaactcccacattatgcaactgcgggtgagcgaatcgtagaaatcactggtgag
tatcagaaggtattaaaagcacttgaggctgtggtggggcatctccggaagtttttagtt
catcacagtgtactacctttgtttgaaaaatttttgacaatgccagctgctcaagattct
gaaccggaagcatggggtgagaaaacgcaggccttgacgcattcatctcatactggaatt
ggcaagcgagattccttataccttgatcatgaataccagtttgattctcagtttccgcac
agtaatctttcactgtatgggcaagatcctgctttatctgggctgagatcatctgggatg
gggctgggccgtactgctggtgctctagttactcaggtgacgcagacaatgcaaatacca
ttatcctatgcagaggacatcattggtattggaggggacaatatagcatatatccgtcgt
actagtggggcagttcttactgttcaggaaacaagaggcgtgcctgatgaaattactgtt
gagattaaaggaaatgcttccgaagttcagaaggctcaacaaattattcaagattttatc
gctgcgcataaaggcccagcgccgagcagctatggaagtgctgatacaggtttgaggtca
tcgtactctcattttggcgggtctagctattcttcatccctctctgcagcatcactcagt
ggatatggatctacaggactcggaggttatggaagttacagatatggattctctggatag
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