Dendrobium catenatum: 110107920
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Entry
110107920 CDS
T05027
Name
(RefSeq) clathrin heavy chain 1
KO
K04646
clathrin heavy chain
Organism
dct
Dendrobium catenatum
Pathway
dct04142
Lysosome
dct04144
Endocytosis
dct05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
dct00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
110107920
04142 Lysosome
110107920
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
110107920
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dct04131
]
110107920
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
dct04147
]
110107920
Membrane trafficking [BR:
dct04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
110107920
Exosome [BR:
dct04147
]
Exosomal proteins
Proteins found in most exosomes
110107920
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
TPR_COPA_B
IcmW
Motif
Other DBs
NCBI-GeneID:
110107920
NCBI-ProteinID:
XP_020694024
LinkDB
All DBs
Position
Unknown
AA seq
1706 aa
AA seq
DB search
MAAANAPITMREALTLPSLGINPQFITFTHVTMESDKYICVRETSPQNSVVIIDMSMPNQ
PLRRPITADSALMNPNSRILALKAQLPGTTQDHLQIFNIEMKAKMKSHQMPEQIVFWKWI
TPKLLGLVTQTSVFHWSIEGDSEPVKMFERTANLTNNQIINYRCDPSEKWLVLIGIAPGS
PERPQLVKGNMQLFSMDQQRSQALEAHAASFASLKVAGNENASILICFASKSHNAGQITS
KLHVIELGAQPGKPGFTKKQADLFFPPDFADDFPVAMQVSHKYNLIYVITKLGLLFVYDL
ETAAAVYRNRISPDPIFLTSEASSVGGFYAVNRRGQVLLATVNEATIVPFVSGQLNNLEL
AVNLAKRGNLPGAENLVVQRFQELFSQTKYKEAAELAAESPQGLLRTPETVAKFQSVPVQ
AGQTPPLLQYFGTLLTRGKLNAFESLELSRLVVNQNKKNLLENWLAEDKLECSEELGDLV
KTVDNDLALKIYIKARATPKVVAAFAERREFDKILIYSKQVGYTPDYLFLLQTILRSDPQ
GAVNFALMMSQMEGGSPVDYNTITDLFLQRNMIREATAFLLDVLKPNLPEHAFLQTKVLE
INLVTYPNVADAILANGMFSHYDRPRIAQLCEKAGLYVRALQHYSELPDIKRVIVNTHAI
EPQALVEFFGTLSREWALECMKDLLLANLRGNLQIIVQVAKEYCEQLGLDACMKLFEQFR
SYEGLYFFLGSYLSSSEDPEIHFKYIEAAAKTGQIREVERVTRESNFYDPEKTKNFLMEA
KLPDARPLINVCDRHGFVPDLTHYLYTNNMLRYIEGYVQKVNPANAPMVVGQLLDDECPE
DFIKGLILSVRSLLPVEPLVEQCEKRNRLRLLTQFLEHLVSEGSQDVHVHNALGKIIIDS
NNNPEHFLTTNPYYDSRVVGKYCEKRDPTLAVVAYRRGQCDDELIDVTNKNSLFKLQARY
VVERMDADLWAKVLEPENEYRRQFIDQVVSTALPESKSPEQVSAAVKAFMTADLPHELIE
LLEKIVLQNSAFSGNFNLQNLLILTAIKADPSRVMDYINRLDNFDGPAVGEVAVEAQLYE
EAFAIFKKFNLNVQAVNVLLDNIRSIDRAVEFAFRVEEDAVWSQVAKAQLREGLVSDAIE
SFIRADDVTQFLDVIRAAEEANVYHDLVRYLLMVRQKVKEPKVDSELIYAYAKIDRLGDI
EEFILMPNVANLQNVGDRLYDAELYEAAKIIFAFISNWAKLASTLVKLKQFQGAVDAARK
ANSSKTWKEVCFACVDAEEFRLAQICGLNIIIQVDDLEEVSDYYQNRGCFNELISLMESG
LGLERAHMGIFTELGVLYARYRPEKLMEHIKLFSTRLNIPKLIRACDEQQHWKELTYLYI
QYDEFDNAATTIMNHSPDAWDHMQFKDVCVKVANVELYYKAVHFYLQEHPDLINDLLNVL
ALRVDHTRVVDILRKAGHLHLIKPYMVAVQSNNVSAVNEALNEIYVEDEDYERLRESVDM
HDNFDQIGLAQKLEKHELLEMRRIAAYIYKKAGRWKQSIALSKKDNLYKDAMETCSQSGD
RELSEELLVYFIEKGKKECFASCLFVCYELIRPDVALELAWMNNMIDFAFPYLLQFIREY
TGKVDELIKDKIEAQNEVKTKEHEEKEMVAQQNMYAQLLPLALPAPPMPGMGGVGGGFAP
PPPPLSMGGIGMPPMPPFGMPQMGSY
NT seq
5121 nt
NT seq
+upstream
nt +downstream
nt
atggctgccgccaacgccccgatcaccatgcgtgaggccctgacgcttcctagccttggt
atcaatccgcaattcattacgttcacacatgttacgatggagtcggataagtatatttgc
gtcagggagacctctccgcaaaatagcgtggtgattattgatatgagcatgccgaatcaa
ccactgaggaggccgattactgcggattcggctcttatgaatcctaacagcaggattctt
gcactaaaagctcaattgcctggaactactcaggaccacctgcaaatatttaatattgag
atgaaagctaaaatgaaatcacatcaaatgcctgagcagattgtcttttggaagtggata
acaccaaagctgttggggttggttacacaaacatctgtttttcattggtcaatagaaggt
gattctgagccagtgaagatgtttgaaagaacagctaatttaacaaacaatcagattatc
aattaccggtgcgacccatcagaaaaatggctagttctcattggcattgcacctggctct
ccagagagaccacaactagttaaaggaaacatgcagctattttctatggatcagcaacga
agtcaagcactggaagcacatgctgcatcgtttgcatcgctcaaagttgctggaaatgag
aatgcatcaattcttatctgttttgcttcaaaatcccataatgctgggcaaataacttcc
aagttacatgtgattgagcttggagcccagccaggcaagccaggctttacaaagaaacaa
gctgatctatttttcccacctgactttgctgatgacttccctgtggccatgcaggtttca
cataagtataatttgatatatgtgatcacaaagcttggtcttctatttgtatatgatttg
gagacggctgctgcagtttatcgaaatcgaataagtccagatccaatatttctgacttca
gaagcttcttcagttggtggattttatgctgttaatagaagagggcaggttcttcttgct
acagtgaatgaggcaactatagtaccttttgtcagtggccagttaaacaatcttgagctt
gctgttaatcttgcaaaacgaggaaaccttcctggggcagagaatttggttgtacaaagg
tttcaggaattgttctctcaaacgaagtacaaggaagctgctgaacttgcagcggagtca
ccccaaggacttctcagaactcctgagactgtagcaaaatttcagagtgtgcctgttcaa
gctgggcaaacaccacccttattgcagtattttggaacattattaaccagggggaagctc
aatgcttttgagtctttagagttgtcgaggcttgttgtaaatcaaaacaagaagaatctt
ttggagaactggttggccgaggataaactcgagtgcagtgaagaacttggggatcttgtg
aagactgtggacaatgatcttgcacttaaaatttacataaaagcaagggctactcctaag
gttgttgctgcttttgccgagagaagggaatttgataaaattcttatttactccaaacag
gttggctacacaccagactatcttttccttttgcagacaattctacggtcagatccgcag
ggagcagtaaattttgccctcatgatgtctcaaatggagggtggtagtcctgttgattat
aatacaattacagatctctttcttcagagaaacatgatcagggaggcaacagcctttttg
ttggatgtgttaaagccaaatctgcctgaacatgcgtttcttcaaactaaggtattggag
attaatttggttacatatccaaatgttgcagatgccatattagccaatggaatgtttagc
cactatgatcgccctcgcatcgctcagttgtgtgaaaaggctggcctgtatgtgcgagct
ctccagcactattctgagttgccagatatcaaacgtgtcattgtgaatacacatgccatt
gaaccacaggcccttgtggagttctttggaacactatctagagagtgggcattggaatgc
atgaaagaccttttgttggctaatttgagaggtaaccttcagataatagttcaggtggca
aaagaatattgtgagcagttaggtttggatgcatgcatgaagctttttgagcagtttagg
tcctatgaaggtctttacttcttcttggggtcgtatttgagttccagtgaagatccggag
atacatttcaagtatatcgaggctgcagccaaaactggacagattagagaagttgagcgt
gttactagagaatctaacttctatgatcctgaaaaaaccaaaaacttcctaatggaggct
aagcttccagatgcaaggcctctaatcaatgtctgtgatcgccatggatttgttcctgat
ttgactcattatctctacaccaacaacatgcttcgatatatcgaaggatatgttcagaag
gtgaacccagcgaatgcaccaatggttgttgggcaacttctagatgatgaatgcccagaa
gattttattaaaggtcttattctttctgttcggtccctccttccagtggagcctcttgta
gagcaatgtgaaaaaaggaatcgtcttcggctgcttacacagttcttggaacatcttgtg
agtgagggaagtcaagatgtgcatgtgcataatgctctaggaaaaatcatcatagacagt
aacaacaatccagagcattttctcactactaatccgtattatgattcccgtgttgttggt
aaatattgtgagaaacgggatcctactttagcagtcgttgcctacaggcgtggacaatgt
gatgacgaacttattgatgtcacaaacaaaaattccctgttcaagttacaggccagatat
gttgtagaaagaatggatgctgatttatgggcaaaggttcttgaacctgagaatgagtat
agaaggcagtttattgatcaagttgtatctacggcattgcctgagagcaaaagtcctgag
caggtatctgcagccgttaaagcttttatgaccgctgatcttccacatgaactaattgaa
ctacttgaaaagatcgtgctccaaaattctgccttcagtggaaatttcaatttgcaaaac
ctgcttattttgacagcaattaaagctgatccatcaagggtcatggattatattaatcgg
ttggacaactttgatgggcctgcagttggagaagtggctgttgaagcacaattatatgag
gaagcctttgctatcttcaagaagttcaacttgaatgtgcaggcagtgaatgtcctgttg
gacaacatccgaagcatagatagagcggtcgaattcgctttccgggtggaagaagatgct
gtttggagccaagttgcaaaggctcagttaagggaaggactcgttagtgatgcaattgag
tcatttattcgcgcagatgatgtaacacaatttttggatgtaattcgtgctgcggaagaa
gccaatgtgtatcatgacttggtaaggtaccttttgatggtgaggcaaaaggtgaaggaa
cctaaggtggacagtgaattaatatatgcctatgccaagattgatcggctaggcgatatt
gaagaattcattctaatgccaaatgttgctaatcttcaaaatgttggtgatcgcttatat
gatgccgaattgtatgaggctgctaaaattatatttgcatttatttcaaactgggccaaa
ctagccagcactcttgtcaaactgaagcaatttcaaggtgcagttgatgctgctcgtaaa
gcaaacagctcaaagacatggaaggaggtttgctttgcttgtgttgatgctgaggagttc
cggttggctcaaatttgtgggcttaatattattatccaggttgatgacttggaagaagtc
agtgattactaccagaacaggggatgcttcaatgagctaatctctctaatggagagtggg
cttggtttggaacgtgcacacatgggcatttttacagagctgggagttctatatgctaga
tataggccagagaaacttatggagcacataaaacttttctctacgcgcctcaacatcccg
aagcttattcgagcttgtgatgagcaacagcactggaaggagctcacttatctgtatatt
cagtatgatgaatttgacaatgctgccaccacaattatgaatcattcgccagatgcatgg
gatcatatgcagttcaaagatgtctgtgtaaaagttgctaatgtcgagctttattacaaa
gccgtgcatttctacttgcaagaacatcctgatcttatcaatgatcttctcaatgtgctt
gccttgcgtgtggaccacacacgtgtggttgatattttgaggaaggctggtcatttgcat
cttattaagccgtacatggttgctgtgcaaagtaacaatgtatctgcggtgaatgaagca
ctgaatgagatatatgtagaggatgaggactacgaacgactgcgagaatcagttgatatg
catgataactttgatcagattggacttgcacagaagcttgagaaacatgaacttcttgaa
atgaggcgaattgctgcctacatttacaagaaagctggaaggtggaaacagtccattgct
ctgtctaagaaggacaacctttacaaggatgccatggaaacttgttcacaatctggagac
cgtgagctttccgaggaattacttgtttatttcattgagaagggtaagaaggagtgtttc
gcttcatgcctcttcgtctgttacgaactgatccggcctgatgttgccctcgagcttgcc
tggatgaacaacatgatcgactttgccttcccatatctccttcaatttatccgggagtac
acggggaaggtggatgaactcataaaggataagattgaggcacaaaacgaagtaaaaacc
aaagaacatgaagagaaagaaatggtagctcaacagaatatgtatgcccagcttcttcct
ctagctttgcctgctcctccaatgcctggcatggggggagttggcggaggctttgcacct
cctccgccacccctctcaatgggcggaatcggcatgcctccgatgccaccatttggcatg
ccgcagatgggaagctactga
DBGET
integrated database retrieval system