Dendrobium catenatum: 110108168
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Entry
110108168 CDS
T05027
Name
(RefSeq) DExH-box ATP-dependent RNA helicase DExH7, chloroplastic isoform X1
KO
K18995
ATP-dependent RNA helicase DHX29 [EC:
5.6.2.6
]
Organism
dct
Dendrobium catenatum
Brite
KEGG Orthology (KO) [BR:
dct00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
dct03012
]
110108168
Enzymes [BR:
dct01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
110108168
Translation factors [BR:
dct03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
110108168
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UBA_DHX29
DSRM_DHX29
DND1_DSRM
nSTAND3
DUF6074
ATPase
DEAD
dsrm
T2SSE
TsaE
AAA_19
AAA_16
AAA_22
Motif
Other DBs
NCBI-GeneID:
110108168
NCBI-ProteinID:
XP_020694344
LinkDB
All DBs
Position
Unknown
AA seq
708 aa
AA seq
DB search
MPPRKQQQRKGSEKARSKSKGHASVSKSAPKLQISAENERLLRRLLLNTEKPESDIEPTA
LPISALDTVGTRAQKAKRLRGIYDKLSLEGFTSDQIEQALSALNEAATFEIALDWLCLNI
PGNELPLKFSSGTASSTNEGDRSVRIISTARTNLVPTKRVIEEMKEGSSGISVRLKGQPD
EVSLDFGKSSQAEWIRQYLEQQEEEEEDEFNEKEKDVDPSSYAVSVTKEYRLARLGALEA
KQKGDRASQKHYSEVINKLKQEFTSLGLSENDVESDLKSEINNLKVPCDPPQGQVLESKL
PDVVKFDSKDAVSAFIVDSCTLEEPSHATGSSVLTITEECEQKEEPEELELDNLFSEDST
SSGTVPSEALKQQKKDNLLHSAYVHMLGNLDEIWKKGDSGRIPKAVLQKFCQRLHWEAPK
YNKVSTKEDKFLYSVSVLRTASGRGKSRTVGGLITFHLPNQDEGFESTEEAQNKVAAFAL
YQLFPDLPFNQLLIEPYASFMTKRLEEDEFSAKVQDNEDYRRTGFVDSLLAAGVSRAPVF
KDAKDEYVCSEMLVDPLRRDDEQNLLINGAAKLPYLNGLTYHEQLESNLLKEELQNKMKN
PKYMTMLESRAALPIAKLKDTILQQLHDNDVIVVSGETGSGKTTQVPQFILDDMIKSGLG
GSCNIICTQPRRIAAMSVAKRVSDERCESCLGGEGSLVGYQVRLDSVR
NT seq
2127 nt
NT seq
+upstream
nt +downstream
nt
atgccgccaaggaagcagcagcagcggaagggtagtgagaaagcccgctcaaaatccaag
ggccatgcgtcggtctcgaaatctgctccaaaattgcagatatcggccgagaatgagcgc
ctccttcgtcgcctccttctcaacactgagaagccggagtcagacattgagccgacggcg
ctccccatctctgccctcgacaccgttggaacccgggctcaaaaggcgaaaaggctccgc
ggcatctatgacaagctatctctcgagggtttcacgtccgatcaaatcgagcaggccctc
tctgccctcaacgaggcagccacgttcgagattgccttggactggctgtgtttgaatata
cctggaaatgagctgcctctgaagttttctagcgggacagcttcttccacaaatgaagga
gataggtcggttagaatcatctccactgcacgaacaaatctggttcctactaagcgtgtt
atagaggaaatgaaagagggctcttctggaatttctgttcggttaaaaggacaacctgat
gaggtatctttggatttcggaaagtcatcacaagctgaatggattcgacaatatttggag
caacaggaagaggaagaagaagatgaatttaatgaaaaagaaaaggacgttgatccaagt
tcttatgctgtttccgttacgaaagagtaccgtctggcaaggctgggagccttagaagca
aagcaaaagggagacagggctagtcagaaacactatagtgaagtcatcaacaaacttaag
caagaattcacttccctaggactatcagaaaatgatgtagaatctgatttgaaaagtgaa
attaataatttaaaggtgccgtgtgatcccccacaaggtcaagtgcttgagtcaaagctg
ccagatgttgtcaagtttgacagcaaagatgcagtgagtgcatttatagttgattcctgc
actttggaagaacctagtcatgctactggtagttcagtccttactattacagaggaatgt
gaacagaaagaggagcctgaagagttggaacttgataatctattttctgaagattcaact
tccagtggaactgtcccttctgaagccctgaaacaacaaaaaaaagataatttgttacac
tctgcatatgtccatatgttagggaacttagatgaaatatggaaaaagggtgattcggga
cgcattcccaaggccgttcttcagaagttttgtcagaggctacattgggaagcacccaag
tacaacaaggtatcaacaaaagaagataaatttctttattctgttagtgtgttgcggaca
gctagcgggcgtggaaagagccggacagttggaggtttgataacctttcatcttcctaac
caagatgaaggctttgaatcaactgaggaggcacaaaataaagtagcagcctttgctctt
tatcaattgtttcccgatcttccatttaaccagcttcttatagagccatatgcttcgttt
atgacaaaacggctggaagaagatgaattttcagcgaaagtacaagacaatgaggattac
cgtagaacaggatttgtggattctctattggctgctggggtttctcgagcaccagttttc
aaagatgctaaagatgaatatgtctgtagtgagatgcttgttgatcctctaagaagagat
gatgaacaaaatttgttaattaacggagcagcaaaattgccatatttgaatggtttaaca
tatcatgaacagctggagagcaaccttttgaaagaggagctgcagaataaaatgaagaat
cctaaatacatgacaatgctggagagtagagcagctcttcctatagctaagctaaaggat
actattttacaacagctccatgacaatgatgtgatcgttgtttctggggaaacaggttct
ggtaaaacaactcaggttcctcagtttattttggatgacatgatcaaatcaggattgggt
ggttcttgtaatatcatatgcacacaacctaggagaattgcggccatgtcagtggctaaa
agagtgtctgatgaacgatgtgagtcttgtctaggtggtgaagggtcattagttggctat
caggttcgccttgatagtgtcaggtaa
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