Dendrobium catenatum: 110108173
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Entry
110108173 CDS
T05027
Name
(RefSeq) replication factor C subunit 1
KO
K10754
replication factor C subunit 1
Organism
dct
Dendrobium catenatum
Pathway
dct03030
DNA replication
dct03410
Base excision repair
dct03420
Nucleotide excision repair
dct03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
dct00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
110108173
03410 Base excision repair
110108173
03420 Nucleotide excision repair
110108173
03430 Mismatch repair
110108173
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dct03032
]
110108173
03400 DNA repair and recombination proteins [BR:
dct03400
]
110108173
DNA replication proteins [BR:
dct03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
110108173
DNA repair and recombination proteins [BR:
dct03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
110108173
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RFC1
BRCT
AAA
AAA_22
PTCB-BRCT
Rad17
DNA_pol3_delta
AAA_30
BRCT_2
AAA_5
AAA_18
Zeta_toxin
AAA_19
nSTAND3
AAA_assoc_2
RsgA_GTPase
AAA_14
Sigma54_activ_2
RuvB_N
NTPase_1
AAA_28
AAA_16
Motif
Other DBs
NCBI-GeneID:
110108173
NCBI-ProteinID:
XP_020694352
LinkDB
All DBs
Position
Unknown
AA seq
964 aa
AA seq
DB search
MKQHDKGNGGSKQTTVSQKSSPNVPEKVKEDEGNFQRRKTSKYFAVASDAEKKSTPLVKD
ETAAEMASSKRKIKKGDDNIHNEVKQSPAKRFRKVDVAADDDDFAPSCEKKKLTDTETLK
KLKSKATGLMKNSVDGVKSDEAENNDKDVETPVKGGGRGRGGSGSASAIGGRGGRGGRGG
FMNFGERKDPPHKGEKEVPEGAPDCLAGLTFVISGTLDSLEREEAEDLIKRHGGRVTGSV
SKKTTYLLADEDIGGKKSAKAKELGTTFLTEDGLFDMIRKSKPAKPSGQNDARSKTPVKK
DKLLEKDCLVKQGLKGTEPSLGIKKSAAEDVQSSISHQKRKVKAGDSLTWTEKYRPKVPN
DIIGNQSLVKQLHDWLANWHTEFLHAGKKSTGKKQSDSAAKKAVLISGTPGIGKSTSAKL
VSQMLGFNVIEVNASDSRGKADAKIVKGVGGSTSNSIKELIDNETLSINKNRSKHQKMVL
IMDEVDGMSAGDRGGVADLISSIKVAKIPIICICNDRYSQKLKSLVNYCMLLNFRKPTKQ
QMAKRLMQVAQAECLQVNEIALEELAERVNGDMRMALNQLQYMSLSLSVIKYDDVRERLL
SSAKDEDISPFTAVDKLFDFKGGKLRMDERIDLSMSDPDLVPLIVQENYINYRPSLAGKD
ENGLKRMNLIARAAESIGDGDIFNVQIRRYRQWQLSQAGSFASTIIPAALIHGNREILEP
GERNFNRFGGWLGKNSTMGKNLRLLEDVHIHILASQTSNLDRQNLRIDYLYLLLKQLTDP
LRVMAKDAAVQTVVEFMNTYSLSQEDFETILELSKFKGHPNPMDGIQPAVKAALTKAYKQ
GSSTRIVRTADLINLPGIKKAPKKRIAAILEPVENSMAEENGDALLENEEGSDSEEADVI
DQIGETRPQLDLHTDNRKGIHVQLDLKIEDGKSNSKNTSASKARGSGSSGKVGRGGSAAG
KRKR
NT seq
2895 nt
NT seq
+upstream
nt +downstream
nt
atgaagcaacacgacaaaggaaatgggggatcgaaacaaactacagtatcacagaaatct
tctccgaatgtccccgagaaggtcaaagaagatgaaggaaatttccaaaggaggaaaaca
agcaaatattttgctgttgcttctgatgcagagaaaaagtccacacctttagtaaaagat
gaaactgcagctgagatggcttcttcgaaaaggaagatcaaaaaaggtgatgataatata
cataatgaagtcaaacaatcaccagcaaaaaggtttcgtaaggtggatgttgctgctgat
gacgatgactttgcaccatcgtgcgagaaaaaaaagctgaccgataccgaaactttaaaa
aaattgaaaagcaaagctaccggactaatgaaaaattcagttgatggtgttaaaagtgat
gaagctgaaaataatgataaagacgttgaaacccctgttaaaggtggaggaaggggcaga
gggggaagcggatcagcatctgcaataggtggaagaggaggaagaggtggaagaggtggt
ttcatgaattttggtgaacgtaaagatccaccacataaaggagaaaaggaagtccctgaa
ggtgcacctgattgccttgctggtctgacatttgtcataagtggcacacttgatagctta
gaaagagaagaagcagaagatctaataaaacgccatggtggtcgtgttacaggatctgtc
agcaagaaaacaacttatcttttagctgatgaagatatcggaggaaagaaatctgcaaaa
gcaaaagagctgggcactaccttcctaacagaggatggactatttgatatgatccgcaaa
tcaaaaccagcaaaaccttctggacaaaatgatgctagaagtaaaactcctgtaaagaaa
gataaattgctggaaaaagactgtcttgtaaagcaagggttaaaaggtactgagcctagc
ttagggattaaaaagagtgctgcagaagatgttcaatcaagtatctctcaccaaaagaga
aaagttaaggctggtgattcgttaacttggacggaaaaataccgtcccaaggttccaaat
gatattataggaaatcaatcacttgttaagcaacttcatgattggctagccaattggcat
actgagtttctgcatgctggtaaaaagtcaaccggtaaaaaacagagtgatagtgcagcc
aaaaaagctgtattaattagtggtacaccaggaattgggaagagcacttcggcaaagctc
gttagccaaatgcttggttttaatgtcattgaggtcaatgctagtgacagtcgtgggaag
gctgatgctaaaattgttaaaggggttggtggaagcacatcgaattctatcaaggaactc
attgacaatgaaactttgagcataaacaagaataggtcaaagcatcaaaaaatggtgcta
attatggatgaggttgatggtatgtctgctggagataggggtggagtggctgaccttatt
tctagcataaaagttgctaagatacctatcatttgcatttgtaatgatcggtacagccaa
aagttgaagagccttgtcaattactgcatgctgcttaactttaggaagccaactaaacag
cagatggcaaaaaggttaatgcaagttgctcaggcagaatgtcttcaggttaatgagatt
gcactcgaagaacttgctgaaagagttaatggagatatgcggatggcattgaatcagtta
caatatatgagtctctctctatcagttatcaaatatgatgatgttagggaacgccttctt
agcagtgcaaaagatgaagatatttcacctttcacagctgttgacaagctgtttgacttc
aaaggtggaaaattacgtatggatgagaggattgatttgagcatgagcgatcctgacttg
gtgcctcttattgttcaagaaaactatatcaattatcgaccatcattagctggaaaggat
gaaaatggactaaaaagaatgaacctgattgctcgggctgctgagtcaattggggatggt
gacatttttaatgtacaaattagaagatatcgacaatggcagctttcccaagcaggttct
ttcgcatctaccataatcccggctgctttaattcatggaaatcgggaaatattagaacct
ggagaaagaaacttcaataggtttggtggatggctgggaaagaattcgacaatgggaaag
aacttgaggcttttggaggatgtccacattcacatccttgcttctcaaacttctaattta
gacaggcaaaacctacggattgactacttgtatcttcttttaaaacaactcaccgatcca
cttcgagttatggcgaaggatgcagctgttcaaactgttgttgaattcatgaatacatat
tccttaagccaggaggactttgagacgattttggagctatccaagttcaagggtcatcca
aatccaatggatggtattcaacctgcagtcaaagctgccttgactaaggcatacaaacaa
ggaagcagcactcgtattgtgaggactgctgacttgatcaatcttccgggcattaagaag
gctccaaagaaacgaattgcagcaattttggagcctgtggagaatagcatggcagaagaa
aatggcgatgcattattggaaaatgaagagggttctgattctgaagaagctgatgtgatc
gaccaaattggtgagactagaccacaactagatctgcatactgataatcgtaaaggaatt
catgttcagcttgatctgaaaattgaggatggcaaatcgaatagtaagaacacatctgct
tccaaagcaaggggttctggatcctcgggcaaggtgggtcgaggtggttcagctgctggc
aagaggaagagatga
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