Dendrobium catenatum: 110108176
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Entry
110108176 CDS
T05027
Name
(RefSeq) vacuolar protein-sorting-associated protein 11 homolog isoform X1
KO
K20179
vacuolar protein sorting-associated protein 11
Organism
dct
Dendrobium catenatum
Pathway
dct04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
dct00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
110108176
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dct04131
]
110108176
Membrane trafficking [BR:
dct04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
110108176
Hops complex
110108176
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VPS11_N
PEP5_VPS11_N
TPR_PEP5_VPS11
VPS11_C
Clathrin
zf-C3H2C3
TPR_Vps41
zf_RING_Vps8_fungal
zf-C3HC4_2
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
110108176
NCBI-ProteinID:
XP_020694356
LinkDB
All DBs
Position
Unknown
AA seq
950 aa
AA seq
DB search
MYQWRKFEFFEDKSGGKSSIPAEITGRIDCCSGGRGRIVIGCDDGTVSLLDRGFKHIYGF
QAHASSVLFLQQLKQRNYLVTVGEEDQTSSHLSSICLKVFDLDKMQPEGSSSTGPVCVQI
LRIFTTQFPEAKITSFLVLEEAPPILLISIGLENGSIYCIKGDLTRERISRFKLQVEGPV
ETSDSSITGLGFRVEGQALQLFAITPTSVSLFSLNDNPPRRQTLDQIGCNSNAVAMSDHM
DLIIGRPEAVYFYEVDGRGPCWAFDGEKKFLGWFRGYLLCVIGDHQINSKNSFNIYDLKN
KLIAHSMMVGEVSHMICEWGYIILIMSDRKVLFIGEKDMESKLDMLFKKNLYNVAINLVH
SQHADAVATAEVLRKYGDHLYGKQEYDEAMSQYIQTIGHLEPSYVIQKFLDAQRIYNLTN
YLEQLHERGLASKDHTTLLLNCYTKLKDVEKLNKFIKGDDSVSEQRFDVETAIRVCRSAG
YHEHAMYVAKKAKRHEWYLKILLEDLGSYQEALQYISSLEPNQAGVTLKEYGKILIEHRP
AETIGILMKVCTDSGETKRISSNGARLSMLPSPMDFINSFVHSPQSLMDFLEKYVSRVKD
SPAQTEINNTLLELYLSNSLSLPSISRESVGDDLNFKANNSWEVANGSASGKKTKPFTES
NDVKKENDRQERFQKGLSLLKSAWTSEMEYPMYDVDLAIILCEMNAFKDGLLFLYEKMKL
YKEVFACYMQAHDHEGLIACCKKLGDSSQGGDPSLWGDLLKYFGELGEDCSKEVKEVLTY
IERDDVLPPIVVVQLLSKNPCLTLSVVKDYIARRLEQESKLIEDDRKSIEKYQEGTTSMR
KEIQELRTNAKIFQLSKCTACTFTLDLPAVHFMCMHSFHLRCLGDNEKECPECAPEYRAV
LETKRNLEQNAKDQDRFFQQVKSSKDGFSVIADYFSKGILSKTTNDTDNT
NT seq
2853 nt
NT seq
+upstream
nt +downstream
nt
atgtatcaatggagaaaattcgagttcttcgaggataaatcaggcgggaagagttcgatt
cctgctgagatcactggaaggatagactgctgctcgggcgggagggggcgaattgtcatc
ggctgcgacgacggaactgtcagcctcctagaccgcggattcaagcacatctatggcttc
caggctcacgcttcctcggtactctttctccagcagctgaagcaacgaaattatcttgta
actgttggcgaggaggatcaaacctcatcccatctgtcctccatctgcttgaaagttttt
gacctagacaagatgcagccagagggctcgagctcaactggtcctgtatgtgtccaaata
ttaagaattttcactactcagtttcctgaagcaaagataacatcatttttagttctggag
gaagctcctccaatattactcatctcaataggattggaaaatgggtcaatttactgcatc
aaaggtgatcttacacgtgagcgaatctcaaggttcaagcttcaggtggagggtcccgta
gagaccagtgattcttcaattactgggctaggtttccgggtcgaggggcaagcacttcaa
ctctttgctataactcctacttctgtgagcttgttcagtttgaacgataacccacctagg
aggcaaactctagatcagattggatgtaacagcaatgctgttgcaatgagtgatcacatg
gatctaattattggtcgccctgaagctgtatatttctatgaagttgatggtcgaggtcct
tgttgggcttttgatggtgagaagaaattccttggttggtttcgtggatatttactatgt
gtcattggagatcatcaaataaacagcaagaattcattcaatatttatgatctaaagaac
aagttaattgcacatagtatgatggtgggtgaggtttcacatatgatatgtgaatggggt
tacataattcttattatgagtgacaggaaggtcttgtttattggagagaaagacatggaa
agcaaactggatatgctcttcaagaaaaatttgtataatgttgcaatcaatcttgttcac
agtcaacatgctgatgctgttgctactgctgaagttcttcgaaaatatggcgatcattta
tatgggaaacaggaatatgatgaggctatgtctcagtatattcagacaatcggtcatctt
gaaccttcatatgtcatccagaagttcttagacgcgcagcgtatttacaatctaacaaat
tacctagaacagttacatgaaagaggacttgcttccaaggaccatacaaccctacttttg
aactgctatacaaaacttaaagatgtggaaaaattaaacaaatttatcaaaggtgacgac
agtgtcagcgaacaaaggtttgatgtggaaactgccattagagtctgtcgctctgctgga
tatcatgagcatgcaatgtatgttgctaagaaggctaagaggcatgaatggtacctgaag
attctactcgaagacttgggtagttatcaagaagctctgcaatacatttcatccttagaa
ccaaatcaagctggagtcaccttgaaagaatatggtaaaattctgatagagcacagacca
gctgaaaccattggaatcttaatgaaggtctgcacagattctggtgaaacgaagagaata
agttctaatggtgcacgcttatccatgcttccctctccaatggactttattaacagtttt
gtacatagtccacaatcacttatggattttttggagaagtatgtgagccgggtaaaggat
tcacctgctcaaacagagattaacaatacccttttggaactgtatctatctaatagttta
tcacttccgtcaatttcacgagaaagtgttggtgatgatctgaatttcaaagccaacaat
tcatgggaggtagctaatgggtctgcatcagggaaaaagacaaaaccatttacagaaagc
aatgatgttaaaaaagaaaatgatcgtcaagaaagatttcagaaagggctatctttgctt
aaaagtgcatggacatctgagatggagtacccaatgtatgatgttgatcttgctataata
ctttgtgaaatgaatgcattcaaagacgggctgttgtttctttatgagaaaatgaagtta
tacaaagaagtatttgcttgctacatgcaggctcatgatcatgaagggctgatagcctgc
tgcaagaagcttggggattcgagccagggaggagatccatccctttggggtgatctgctg
aagtactttggtgagcttggtgaagattgctccaaagaagtaaaggaagttttgacttat
attgaaagggatgatgttttgcctccaattgttgttgttcaattgctgtctaaaaatcct
tgtttgacactttctgtggttaaggactacattgcgcgaagacttgaacaagaatccaag
ttgattgaagatgacagaaaatcaattgagaagtaccaggaaggaaccacttcaatgaga
aaggaaatacaagagctcagaacgaatgcaaagatcttccagctaagtaaatgtactgct
tgcacctttactcttgatcttcccgcagttcattttatgtgtatgcattccttccatctg
cgttgccttggtgataatgagaaagaatgccctgagtgcgcacctgagtacagagcagta
ttagagactaaaagaaacttagaacaaaatgccaaggaccaggaccgtttcttccagcaa
gtcaagagctccaaagatggtttttctgtgattgctgactatttcagtaagggcattttg
agcaagacaactaatgacactgataacacctga
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