Dendrobium catenatum: 110108545 Help Entry 110108545         CDS       T05027                                  Name (RefSeq) E3 ubiquitin-protein ligase COP1   KO K10143   E3 ubiquitin-protein ligase RFWD2 [EC:2.3.2.27] Organism dct  Dendrobium catenatum Pathway dct04120   Ubiquitin mediated proteolysis dct04712   Circadian rhythm - plant Brite KEGG Orthology (KO) [BR:dct00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    04120 Ubiquitin mediated proteolysis     110108545  09150 Organismal Systems   09159 Environmental adaptation    04712 Circadian rhythm - plant     110108545  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04121 Ubiquitin system [BR:dct04121]     110108545 Enzymes [BR:dct01000]  2. Transferases   2.3  Acyltransferases    2.3.2  Aminoacyltransferases     2.3.2.27  RING-type E3 ubiquitin transferase      110108545 Ubiquitin system [BR:dct04121]  Ubiquitin ligases (E3)   Single Ring-finger type E3    Other single Ring-finger type E3     110108545   Multi subunit type E3    Cul4 complex     Target recognizing subunit (DCAF)      110108545 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  WD40 WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_TEP1_2nd WDR55 Beta-prop_RIG_2nd Beta-prop_EIPR1 Beta-prop_DCAF4 WD40_MABP1-WDR62_2nd EIF3I Beta-prop_WDR90_POC16_2nd WD40_RFWD3 Beta-prop_WDR19_1st zf-C3HC4_2 WD40_MABP1-WDR62_1st Beta-prop_TEP1_C zf-C3HC4 Beta-prop_HPS5 Beta-prop_EML Beta-prop_WDR75_1st Beta-prop_CAF1B_HIR1 WD40_like zf-C3HC4_3 Beta-prop_DCAF12 zf-RING_2 Beta-prop_SCAP zf-C3HC4_4 Beta-prop_IFT122_1st zf-RING_UBOX zf-RING_5 Beta-prop_IFT140_1st Beta-prop_WDR35_TULP_N Beta-prop_SPT8 RING_XB3-XBAT31 zf-rbx1 YbfN Baculo_p24 Motif Other DBs NCBI-GeneID:  110108545 NCBI-ProteinID:  XP_028554358 LinkDB All DBs Position Unknown AA seq 696 aa AA seqDB search MGDASSGALVPSVKLEERQPQTFPPPASVPAAAVSTSEMTETAVATATAAAAAATVTAEE AELDKDLLCPICMGTIKDAFLTSCGHSFCYMCIVTHLQNKSDCPCCSHYLTKNLLYPNFL LNKLLKRMAARQIEKTASPVEHLRLALQQKDCEISVKELDNLLSLLTEKKRKMEQQEAET NMQILLDFLYCLRKQKLDKLNEVQTDLQYIKEDINAVEKHRVDLYRARERYSVKLRMLPD DPAASNLWPSTVDRHNNVLVSSARSPYGVACSGVFQGKKVDMKVQGNFPSQPRKDAFSGS DTQLSLNQSGLIVARKRRINAQFNELQECYLQKRRHGASQLSRQGERDENPINREAYHAG LQDFQSVLTTFTRYSRLRVIAEVRHGDLFHSANIVSSIEFDRDDELFATAGVSKCIKVFD YAAVVNEPADVHCPVVEMSTRFKLSCLSWNKYSKNIIASSDYEGTVTVWDVNTRQSVMEY EEHEKRAWSVDFSRTEPSMLVSGSDDYKVKVWCTKQEASVFNIDMKANICCVKYNPGSSI YVAVGSADHSIHYFDLRKTSTPVHVFRGHRKAVSYVKFLSTNELASASTDSTLRLWDVKD NTAVRTFRGHTNEKNFVGLTVNNEYIACGSETNDVFVYHKAISKPAAWHRLGSPDLDDTD DDPGSYFISAVCWKSDSPTMLAANSQGTIKVLVLAA NT seq 2091 nt NT seq  +upstreamnt  +downstreamnt atgggagacgcctcttccggggcgctagtgccgtcggtgaaattggaggaaagacaacca cagactttccccccgccggcttcggtgccggctgcggcggtgtcgacatccgagatgaca gagacggcggtggcgacggcgacggcggcggcggcggcggctacggtaacggctgaagaa gctgagcttgataaggatttgctatgcccgatctgcatggggacgatcaaggacgctttt ctgacgtcgtgcgggcatagcttctgctatatgtgtatcgtcacccatcttcagaacaag agcgactgcccttgttgctcgcattacctcacgaagaatctcctctaccctaatttccta ctaaacaagctcctgaaaaggatggccgctcgccaaattgagaaaactgcatcaccagtt gagcatcttcgtctagcattgcaacagaaagattgtgaaatatcagttaaagagctagat aacctgttgtctctcttgactgagaaaaagaggaaaatggagcaacaagaagcagagact aacatgcagattttactggactttctgtactgccttaggaaacagaagctggataaatta aatgaggttcaaacggatcttcagtatatcaaagaagacataaatgccgtagagaaacac agggtagatttatatcgtgcaagagaacggtattctgttaaattacgaatgcttccagat gatcctgctgcatcaaatttgtggccttctacagttgataggcataacaatgtcctagta tccagtgctcgtagtccttatggggtagcttgctctggagtgtttcaaggtaagaaagtt gatatgaaggttcaaggaaactttccatcccagccaaggaaagatgcctttagtggttca gacactcaactttctcttaatcaatcgggacttattgttgctagaaagaggcgaataaat gcacagtttaatgagctccaagaatgctacttgcaaaagaggcgtcatggagctagccaa ctcagtaggcagggagaaagagatgaaaatccaatcaacagagaagcgtatcatgctggt cttcaggattttcagtctgtgttgacgacatttactcgctatagccggttgcgtgtgatt gcagaggttagacatggagatctgtttcactctgcaaatatagtttctagcatagaattt gaccgtgatgatgaattgtttgctacagctggcgtttccaaatgcattaaagtttttgac tacgctgcagttgttaatgaaccagctgatgtacactgccctgttgtagaaatgtccaca cgtttcaaacttagttgcttgagttggaataagtactcaaagaacatcattgcaagtagt gactatgaaggaactgtaactgtttgggacgtaaatacacgccagagtgtcatggagtat gaagaacatgaaaagagagcatggagtgttgacttttcacgtacagagccatcaatgctt gtttccggaagcgatgattacaaggtaaaggtttggtgcacaaagcaagaagcaagtgtt tttaatattgacatgaaagcaaatatttgttgcgtgaaatacaatcccggttcaagcatt tatgtggcggtgggttctgcagaccatagtattcactattttgatttgagaaagactagt acaccagtacatgttttcagaggacacagaaaggctgtttcatacgtgaaatttttatct actaatgagcttgcatcggcctcaactgacagcacattgcgcttgtgggatgtaaaggat aacacggcagtgagaactttcagaggccacaccaacgagaagaattttgttggtcttaca gtaaacaatgagtacattgcttgcggaagtgaaacaaatgatgtttttgtatatcacaag gccatttccaagccagcagcctggcatagattaggctcccctgaccttgacgacacagat gatgaccccggatcatatttcatcagtgctgtttgctggaagagtgatagccctacaatg ctggcagccaacagtcaaggcactatcaaagtccttgtgctagcggcttga

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