Dendrobium catenatum: 110108810
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Entry
110108810 CDS
T05027
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp31 homolog
KO
K12844
U4/U6 small nuclear ribonucleoprotein PRP31
Organism
dct
Dendrobium catenatum
Pathway
dct03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dct00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110108810
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dct03041
]
110108810
Spliceosome [BR:
dct03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
110108810
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nop
Prp31_C
NPR1_like_C
Motif
Other DBs
NCBI-GeneID:
110108810
NCBI-ProteinID:
XP_028553981
LinkDB
All DBs
Position
Unknown
AA seq
486 aa
AA seq
DB search
MANLADSFLADLEELSDDEAPVPDEDEAEVGDMEEDGDDDMDDLEALNYDELDSVSKLQK
TQRYNDIMEKVEEALQKGSDISGQGMVLEDDPEYQLIVDCNGLSVDIENEIIIIHNFIRD
KYRMKFPELESLVNHPIDYARLVKKIGNEMDLTLVDLEGLLPSAIIMVVSVTASTTSGKR
LPDDVLNKTIDACDRALALDLAKKKVLDFVESRMGYIAPNLSVIVGSAVAAKLMGTAGGL
SALAKMPACNVQLLGAKKKNLAGFSTATSQFRVGYLEQAEIFQSTPPSLRTRACRLLAAK
STLAARVDSIRGDPTGKTGRNLREEIRKKIEKWQEPPPAKQPKPLPVPDSEPKKKRGGRR
LRKMKERYAVTDMRKLANRMLFGIPEESSLGDGLGEGYGMLGQAGSGRLRVSVAQSKLAT
YRATRAFKEKQYGSSGATSGLTSSLAFTPIQGIELTNPQSHGNLLGSGTQSTYFSEVGTF
SKIKRT
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atggctaatcttgctgattctttcttggctgatcttgaagagttatctgacgatgaggct
cctgttcctgatgaagatgaagcggaagttggtgacatggaagaagatggagatgatgat
atggatgacctggaagcactcaattatgatgaacttgatagtgtttctaaattgcagaaa
actcaaagatataatgatattatggaaaaagttgaagaagcgctgcagaaaggatcagat
atttctggtcaagggatggttttagaggatgatcccgaatatcagcttattgtggattgt
aatggtttatcagtggacattgaaaacgaaattatcattattcataatttcatacgtgac
aaatacaggatgaagttccctgaactcgaatctcttgtgaatcaccctattgattatgct
aggttggttaaaaagattggaaatgagatggacttaactcttgtggacttggaagggctt
ttaccctcggctattattatggtagtttctgtcactgcatcaactaccagtggtaagcgt
cttcctgatgatgtcttgaataaaacaattgatgcatgtgatcgagcccttgctcttgat
ttagcaaagaaaaaggtactggattttgttgagagtagaatgggatacatagcaccaaat
ctttctgtcattgttggaagtgctgttgcagcaaagcttatgggaactgctggcggttta
tctgctttagcgaaaatgccagcatgcaatgtacaactccttggggcaaagaaaaaaaat
cttgctggtttttcaactgcaacctcacagtttcgtgttggctatcttgaacaagcagag
attttccagagcactcctccttctttgaggacacgtgcttgcagacttctggctgcaaaa
tcaaccctggcagccagagtagattcaataagaggagatccaactgggaagactggaaga
aacttacgagaagagattcgtaaaaagattgaaaagtggcaagagccaccccctgcaaag
cagccgaagcccctacctgttccagactccgaaccaaagaaaaaaagaggtggtcgtcgg
ctaagaaagatgaaagaaagatatgctgttactgatatgaggaagctagcaaacagaatg
ctatttggaattccagaagagagttcactaggtgatggcttgggtgaggggtatggcatg
cttggtcaggcaggaagtgggaggttgcgcgtgtcagttgcccaaagtaaacttgctacc
taccgtgctacaagagcgttcaaggagaaacagtacggaagtagtggtgctacatccgga
ttgacgtcaagtctggcattcacacctatacaaggaattgaactcacaaacccacaatcc
catggtaatcttttaggtagtggaactcaaagcacctatttctctgaagttggaacgttc
tcaaagatcaagaggacatag
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