Dendrobium catenatum: 110109422
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Entry
110109422 CDS
T05027
Name
(RefSeq) cyclic nucleotide-gated ion channel 18-like
KO
K05391
cyclic nucleotide gated channel, plant
Organism
dct
Dendrobium catenatum
Pathway
dct04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
dct00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
110109422
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
dct04040
]
110109422
Ion channels [BR:
dct04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
110109422
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
IQ_SCN5A_C
DUF2254
TssN
Motif
Other DBs
NCBI-GeneID:
110109422
NCBI-ProteinID:
XP_020696148
LinkDB
All DBs
Position
Unknown
AA seq
710 aa
AA seq
DB search
MSASSSPFPFTSSWKMNALGFGFPSPASKFLPFRQGSYRTPNLLRKKWHRPRRILDPGGD
VVLKWNRIFLISCLVALFLDPLYFYLMFIGGPSCMRIDQGIGIIVTFFRTVADLFYLAHM
LLKFRTAFVAPSSRVFGRGDLVKDPHQIAMRYLKGDFFIDLAAMLPIPQILIWFVIPAVS
SSSANHTNNTLSMIVFIQYIPRLFLIFPLNSRIVKATGVVTKTAWAGAAYNLLLYMLASH
VLGALWYLLSMERQYTCWLTECMKENGTMKMPLCNPSFLDCNSLNLPERKAWINATKVIS
NCDATSSNVNFNFGMFSDALNNEVVGATFIAKYLYCLWWGLQNLSSYGQNLATSTYIGET
LFAILICIMGLVLFSHLIGNMQTYLQSITVRLEEWRVKRRDIEEWMRHRQLPPDLQERVR
RFVQYKWLATRGVDEDSILVSLPLDLRREIRRHLCLALVRRVPFFSQMDDQLLDAICERL
VSSLSTKDTYIVREGDPVDEMLFIIRGQLESSTTDGGRTGFFNSITLRPGDFCGEELLTW
GLMPNPSVNLPLSTRTVRALSEVEAFALRAEDLKFVANQFKRLHNKKLQHAFRFYSHQWR
TWGACFIQTAWRRYKKKKLGMELAKQENLYYSPAMAETIPVNEDSDAPLLAEYADVGDSA
FGGNANFAKNTKRGANQKLKRDDTVSLSVKMPKLIMKPDEPDFSFNEDGL
NT seq
2133 nt
NT seq
+upstream
nt +downstream
nt
atgtccgcgtcctcctcccccttcccgttcacctcctcatggaagatgaacgctctcggt
ttcggctttccctcgccggcgtcgaaattcctccccttcaggcaggggagttatcgaaca
cccaatctcctccgcaaaaagtggcaccggcctcgccgtatcctcgatcctggtggcgat
gtcgtcctcaaatggaaccgtatcttcctcatctcctgcctcgtcgcactcttcctcgat
cccctctacttctatctaatgttcatcggcggtccctcctgcatgcggattgatcagggc
atcggcattattgttaccttctttcgcacggtagctgacttattttatctcgctcacatg
cttctgaagtttcgcacggcctttgttgcgcctagctccagggttttcgggaggggtgat
cttgtgaaagacccccatcagatcgccatgagatacctcaaaggggattttttcatcgat
cttgctgcaatgcttccgattcctcagatactaatatggtttgtaataccggcagtgagt
agctcatcagccaatcacaccaacaacacactgtcaatgattgtcttcatccagtacatt
ccaaggttgtttcttatatttcctcttaattcacggatcgtcaaagccaccggagttgtt
acgaaaactgcatgggcaggagctgcgtacaatcttctcctatatatgcttgcgagccat
gttttaggtgctttatggtatcttttatcaatggaacgccaatatacttgctggttgaca
gaatgcatgaaagagaatggcaccatgaagatgccactgtgcaatccaagttttctggac
tgtaatagtcttaatctacctgagcgaaaagcctggatcaatgctactaaagtgataagc
aattgtgatgcaactagtagtaatgttaatttcaattttggcatgttctctgatgcattg
aataatgaagttgttggagcaaccttcatagcaaagtacctgtattgtctctggtggggc
ttgcaaaatttgagctcgtatggacagaatttggctacaagcacttacattggggaaact
ttatttgccattctaatatgtataatgggccttgttctgttttcacatttgataggaaat
atgcagacctatttgcaatccattactgtgaggcttgaagaatggagagtaaaaagaaga
gacattgaggaatggatgagacatcgtcaactaccaccagatttgcaagaacgggttagg
aggtttgttcagtacaaatggcttgctacaagaggtgttgatgaagactcaattttggtc
tccttacctttggaccttcgtcgtgaaattagaagacatctttgtcttgctctagttcgt
agggttccatttttctcccaaatggatgaccaactactagatgcaatatgcgaacgacta
gtctcatccctgagcaccaaagatacttacattgtccgggaaggtgacccagtggacgag
atgctctttattatccgcggtcagctcgagagctcaactacagacggcggaagaactgga
tttttcaactccataaccctaagacctggagatttctgcggtgaagagcttctcacatgg
ggtctcatgccaaatccaagcgtcaatctaccactctccacccgaactgttagagccctt
agcgaagtagaggcatttgcgcttcgagctgaagacctaaaatttgttgcaaatcagttc
aaacgtctccacaacaagaagctacagcatgctttcaggttctattcccatcaatggagg
acatggggagcctgcttcatccaaactgcatggagaagatacaagaagaagaagctagga
atggaactggctaagcaagagaatctctactactcaccagccatggctgaaacgataccg
gttaatgaggattccgatgctccattgctcgctgaatatgcggatgttggtgacagtgct
tttggaggcaatgccaactttgcaaagaacacgaagagaggagcaaatcaaaagcttaag
cgggacgatactgtttccctcagtgtgaagatgccgaagctgatcatgaagccggatgag
ccagacttctctttcaatgaagatggtctgtga
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