Dendrobium catenatum: 110109480
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Entry
110109480 CDS
T05027
Name
(RefSeq) DNA polymerase zeta catalytic subunit isoform X1
KO
K02350
DNA polymerase zeta [EC:
2.7.7.7
]
Organism
dct
Dendrobium catenatum
Pathway
dct03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
dct00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
110109480
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dct03400
]
110109480
Enzymes [BR:
dct01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
110109480
DNA repair and recombination proteins [BR:
dct03400
]
Eukaryotic type
TLS (translesion DNA synthesis) factors
B-family DNA polymerases
110109480
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_B
POL3_N
REV3_N
DNA_pol_B_exo1
zf-C4pol
divDNApol
DUF2116
Motif
Other DBs
NCBI-GeneID:
110109480
NCBI-ProteinID:
XP_020696220
LinkDB
All DBs
Position
Unknown
AA seq
2014 aa
AA seq
DB search
MASQNDSDVFSVRIVSLDYYMSSPIPDLDSCSSSFLGTKVEEVPVIRIYGATPAGQKTCL
HVHGALPYFYVPFPKHLLQSSEEGQAFIHTLSGAMEKALRNKSISSSKRQHVHGCSLVRA
KKLYGYHSSEELFVKIFIYYPHDISRAASLLLDGSILGTSFQPYESHIPYLLQFLVDYNL
NGMSHLHTSKVKFRSPLTYYCNAASLRNKNFDMPPTLSSSTSDKTKIWLPSTVPSSAVWP
DSTGSLDSIDNKCIDLIRRQSICQLEVDTSVEDIINQNFKIYTSLSQTSFDVRMVQSLVP
IWEEEYERSGIHEATKLDDPKRSRADRVLRSFMDGLNYDKPLHELCLETSNFFPSKVHVD
GSENVVKYMKPFSDIFTKIELTGSHQHDKSRDVCLVGGEEENRNKETSSSQSPMRGDLQR
LDTEALGLLSWLASSQAEEEMDTGDELLHEAILSPLLPGKSYTAALEIAHRDYEHASQVE
CQDILDSVEDILKSERPKEEASTSFQGLILDSVECILMSDGLKEQALSSSRDLLDAVSSG
VSIPQVDGSFDDNWKTPQKGNTSEANMSYGEDKAVARSAGMGLRAGSKNKERKLWGNLPF
SISKNEHEASESFCVASSSCDEMINDGSYNPPFYHKEGNQYDDFKNENVIENNSEKSGKT
SGLCSIRDLMRKKRYLRVEQVETTVQKNEDMAHGQKQELTPQFPVEEPSIGRSVTHQNIR
GSIACSTIASSNFQGIECFEHHSSFCNTVQKAFSPLCTGNVQSSTAPSEIIGFKQGFGLN
EQSKISEAALNIEAGELSVLETVPMQLLESSEVKPVGSVSYVERPLSSPNIRKCQSNHNE
NSAGNAALKSHRHKNWNSGNIANNYAITSEGGIAQEALLPEMCHRNCQQSTCLFDENSRD
FCKEKNFQEFIEMAFINRPPSNMHIYEPEESLPAGQANGNIDKRQGMENIMPFFPRISQD
VNLYDENVIFSQDFALGIPTHFQNDGSVLYLLTHAQSPPTLNTVYDWLLGEKQRCLLEAT
GASKEGLDSYYDGMLNEGTTSCQNSPSPSASGWSQYDSTQSNKEKSFPKTENFHPDIGHI
SCEPKLNNIPAKEKVVNEDLRDLSQISGPEKYGNSNPTPISQLGFRDPASVGHGQQLKII
SMEILAESRGDLKPDPKFDAINILSLVVREDTSNVCQSYVLLRVIDEKLGEKNGNGVSVC
NLFFFTEEKLLLEHFVEIISYFDPDVLMGWEIQVGSLGYLAERALYLGMNLLKKLSRTPF
HEIRDKLEDSGNSKLSDVHPGVIITETVIENSIIEDEWGRTHASGLHVGGRIVLNIWRLM
RAELKLNMYTAEAVAEVVLRQKIPLFSHRKLNQWYSSGIGRARDKCIGYVMERAMLNHKI
MDQLDMINRISELARIFGIDFFSVIARGSQFRVESMLLRLAHTQNYLAISPGYQQVASQP
AMECLPLVMEPESGFYVDPVVVLDFQSLYPSMIIAYNLCFCTCLGNAMSSRENVLGVSSY
SPDVQILKDLKEKLMLTPNGVMFVPPEVRKGVLPRLLEEILSTRIMVKQAMKKLKSSQLV
LHRILNARQLALKLISNVTYGYTAAGFSGRMPCAEIADSIVQCGRRTLETAISFVNQHEK
WKAKVIYGDTDSMFVLLKGRSKEDAFIIGNEIASAITTMNPEPVALKLEKVYQPCFLLTK
KRYVGYSYESPEQEKPTFDAKGIETVRRDTCPAVAKTLERSIRLIFESNDLSEVKSYLKR
QWTRILAGKISLKDFVFAKEVRLGTYSSRSSSVPPAAIVAKKAMEMDPRAEPHYGERVPY
VVVHGEPGSRLMDMVVNPYYLLDLNSPYRLNDLYYINKQMIPALQRVFGLLGADVNKWFS
AIPRPTRPVLAKRHTLMSHAQSFHEDDSDNSMVSKKPNAKRMRIDTYYSSKHCILCGDLI
QSLEHFCVKCSRKKALLAATVVGRTSKKESEMLHLVEICRHCGGGDWIVESGVKCISLSC
AVFYERKKVQKELQSLSSFATASGFYPPCDAELF
NT seq
6045 nt
NT seq
+upstream
nt +downstream
nt
atggcttcgcagaatgattccgacgtctttagcgttcgtatagtctctctcgattactac
atgtcgtctccgatcccagacctagactcctgcagcagttcctttctagggaccaaggtg
gaggaggttcccgttataaggatatacggagctacgccggctggacagaagacttgcctg
cacgttcatggggcgttaccatacttctacgtaccttttcctaaacacctgttgcaaagt
tctgaagaaggccaagcatttattcatactctatcaggtgctatggagaaagccttaagg
aataagagcatttcttcatcaaagaggcaacatgtgcatggttgcagccttgttcgagca
aagaaattatatgggtatcattcatcagaggagctgtttgtgaagatctttatatattat
cctcatgatatttctcgagcagctagccttcttctggatggctctattcttggtacatct
ttccagccttatgaatctcatataccgtacctccttcagttcttggttgactacaattta
aatggaatgagccatttgcacacgtcaaaggtcaaattccgttctccattaacatattac
tgtaatgctgcttctttaaggaacaagaattttgatatgccaccaactctgagtagcagc
actagtgataaaacaaaaatatggcttccttccacggtaccaagttctgcagtctggcca
gattctactggctcgcttgatagcattgataacaagtgcatcgacctgattagacgtcag
agcatctgtcagctagaggttgatacaagtgttgaggacatcatcaatcagaattttaaa
atttacacgtccctttctcagacaagttttgatgttagaatggttcaatcactagtacct
atttgggaggaggaatatgagcgctctggtatccatgaggcaaccaagctagatgatccc
aaacgatctcgtgcagatcgggtcttgagaagttttatggacgggcttaattatgataag
ccactccatgaattgtgcttagaaacaagcaatttttttccatccaaggtccacgttgat
gggagtgaaaatgtagtcaagtatatgaagccgtttagtgacattttcacgaaaattgaa
ctcacgggttctcaccagcatgacaaatctcgtgatgtttgtttggtgggtggggaagag
gaaaatagaaataaagaaacatcatcttcccaaagtccaatgcgaggagatttgcagagg
ctggatactgaagctctaggacttttaagctggcttgcatcttctcaagctgaagaagaa
atggataccggtgatgaactacttcatgaagccatccttagtcctttattgcccggaaaa
tcatacacggcagccctcgagatagctcatagggattatgagcatgcttctcaggtagaa
tgccaggacatccttgattcagttgaagatattctgaagtctgagaggcccaaggaagag
gcttcaacttcttttcagggccttattcttgattcagttgaatgcattctcatgtctgat
gggttaaaagaacaggctttatcttcctctcgggaccttttggatgctgtttcgtctggt
gttagtattcctcaagttgatgggtcctttgatgacaattggaagactccccagaaaggg
aatacttctgaggcaaatatgtcttatggggaggataaggctgtcgctcgatctgcagga
atgggcctaagggctggtagtaaaaacaaagaaagaaagctttggggaaatttacctttt
tctatcagtaaaaatgagcatgaagcttctgaatctttctgtgttgcttcttcttcatgt
gatgagatgataaatgatggttcttacaatcctccattttatcataaagaaggtaatcaa
tatgatgatttcaaaaatgaaaatgttatagaaaacaatagtgagaagagtggaaaaaca
tcaggtttgtgctctataagagatttaatgaggaaaaaacgatacctccgggttgaacaa
gtggaaacaacggttcaaaagaatgaagacatggcacatggtcaaaagcaagaactaaca
ccacaatttcctgttgaagagccttccatagggcgatctgtaactcatcaaaatatacgg
ggaagtatagcatgttctaccattgcatcttcaaattttcaaggaatagaatgttttgaa
catcattcaagtttttgtaatacagtccagaaggcattttctcctttatgcactggtaat
gtgcaatcgagcacagctccaagtgagattattggttttaagcaagggtttggccttaat
gaacaatcgaaaatttctgaagcagcactgaatatagaagctggggaattgtctgtgctg
gaaactgtaccaatgcaattacttgaatcctcagaggttaaaccagtgggatctgtctcg
tatgttgagagacctttaagttcaccaaacataaggaaatgtcaatccaaccataatgag
aattctgctggaaatgctgctttgaaatctcatagacacaaaaactggaattctggaaat
attgcaaacaactatgcaattacctcagaaggtggcattgctcaggaggcgctccttcct
gaaatgtgccatagaaattgtcagcagtcaacatgcctatttgatgagaatagtagagat
ttctgtaaagaaaaaaattttcaggaatttattgagatggcctttatcaacagaccccca
tctaacatgcatatttatgaaccagaagaatcattacctgcaggacaagctaatggaaat
atagataagaggcaaggcatggagaacataatgcccttcttcccaaggatctcccaggat
gtgaatttatatgatgagaatgttatttttagtcaggattttgcacttggtattccaact
cactttcagaatgatggatcagttttatatttgctgactcatgctcagtcgccaccaact
ttgaacactgtttatgattggcttttaggagaaaaacagcgttgcctactagaagcaaca
ggtgcatcgaaggaaggcttagattcatactatgatggaatgttgaatgaaggaactact
tcttgccaaaattctccctctccttcggcttctggttggtcacagtatgactcaacccaa
tcaaacaaagaaaaaagcttcccgaaaactgaaaattttcatcctgatattggccatatt
tcttgtgagccaaaattgaataacattcctgcaaaagagaaagttgttaatgaagatttg
cgtgatctctctcaaatttcaggtcccgagaaatatggaaattccaatcctactcctata
agtcaacttggtttccgggatccggctagtgttggtcatggacagcaactaaaaataata
agcatggagatcctggcagaatcacggggtgatcttaagcctgacccaaaattcgatgct
attaatatcttatctctggtagttcgagaagatacaagcaacgtgtgtcaatcttatgtc
cttttacgtgttattgatgagaaactgggtgaaaaaaatggcaatggtgtttctgtttgc
aaccttttttttttcactgaggaaaagctattgctagaacactttgttgagattatttct
tattttgatccagatgttcttatgggatgggaaattcaagttggctcccttggttatctt
gctgaacgagcattatacctaggtatgaacttactcaagaaattatcccgtacaccattt
catgaaataagggacaagttggaggattcagggaattccaaattgtctgatgtgcatccc
ggagtaataattactgaaactgttattgaaaattcaataattgaggatgagtggggtcgt
actcatgctagtggtttacatgttggtggaaggattgtgcttaatatttggcggcttatg
cgtgctgaattaaaactcaatatgtatactgctgaagctgtggctgaagtagttttgagg
caaaagattccattgttttctcacaggaaattgaaccaatggtactcaagtggcattgga
cgagcaagggataaatgcattggatatgttatggagagagcaatgcttaatcataaaatt
atggatcagcttgatatgatcaatcggatatctgagcttgctcgtatattcggtattgat
ttcttttctgtaatagctcgaggttcacaatttcgtgttgagtctatgctcctcaggctg
gcacacacccaaaattatcttgccatttcaccggggtatcagcaggttgcctcacagcct
gcaatggagtgtttacctcttgtcatggaaccggagtctgggttctatgttgatcctgtt
gttgttttagattttcaatctctatatccatcaatgatcatagcatacaacctctgcttt
tgtacatgcttagggaatgccatgtcatcacgggaaaatgttcttggtgttagttcttat
tcaccggatgtgcagattttgaaggacttgaaagaaaaacttatgctgactccaaatggg
gttatgtttgttccaccagaggtccggaaaggcgtattacctcgactcttggaggaaata
ttatctactaggataatggtgaagcaagccatgaagaaattaaagtcttcacagctagtt
ctccacaggatactcaacgcacgccaacttgctttgaagttgatttcaaacgtcacttac
ggttacacagctgctggctttagtggtcgcatgccatgtgctgaaattgctgacagcatc
gtccaatgtggtcggaggacgcttgaaactgcaatatcttttgtgaaccaacatgaaaag
tggaaagcgaaggttatttatggtgatactgacagcatgtttgttctccttaaaggtcgc
tcaaaagaagatgcttttataattggaaatgagatcgcatcagcaattactacaatgaat
ccagagccagtcgcattgaaactggaaaaagtctatcagccttgctttcttcttacaaag
aaacgttatgttggttacagctatgaaagtcctgagcaggaaaagcccacatttgatgcc
aaaggcattgagactgtacgaagagatacctgcccagctgttgcaaagaccttagagcgt
tcaataagattaatttttgaaagtaatgatttatcagaggtgaaatcatatctgaagcgt
caatggacaagaatactagctggcaagatatcccttaaagattttgtttttgctaaggag
gttagattaggcacatacagcagcagatcctcttccgtcccaccagcagcaatagttgca
aagaaagccatggaaatggatcccagagcagaaccacactatggagaacgagttccttat
gtagttgttcatggagaacccggatctcgcctcatggacatggtggtcaatccttattat
cttttagatttgaattctccatacagattaaacgatctatattatatcaacaagcagatg
attcctgcactgcaaagggtgtttggtctccttggagctgatgttaacaagtggttttct
gctatacctcgtccaaccagacctgtacttgctaaacgacatacccttatgtcgcatgct
cagtcattccatgaagatgatagtgataattctatggtttctaagaaaccaaatgccaaa
agaatgcggatagatacttattattcttcaaagcactgcatcttgtgcggcgacttgatt
caatcattggagcatttctgtgtaaagtgctcacggaaaaaagcacttctagcggctact
gtggttggaagaacttcaaaaaaagaaagtgagatgctacacctggttgagatttgcagg
cactgtggaggcggcgattggattgttgagagtggtgtgaaatgcatatcgctctcatgc
gcagtcttctatgagaggaagaaagttcagaaagaactacaatctctttcttctttcgct
acagcttcaggattttatccaccctgcgatgctgagctgttttag
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integrated database retrieval system
