Dendrobium catenatum: 110109604
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Entry
110109604 CDS
T05027
Name
(RefSeq) FACT complex subunit SSRP1 isoform X1
KO
K09272
FACT complex subunit SSRP1/POB3
Organism
dct
Dendrobium catenatum
Brite
KEGG Orthology (KO) [BR:
dct00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
dct03000
]
110109604
03036 Chromosome and associated proteins [BR:
dct03036
]
110109604
Transcription factors [BR:
dct03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG2-related
110109604
Chromosome and associated proteins [BR:
dct03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
FACT complex
110109604
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PH1_SSRP1-like
POB3_N
Rttp106-like_middle
SSrecog
HMG_box
HMG_box_2
HMG_WDHD1
CDC45
YL1
Motif
Other DBs
NCBI-GeneID:
110109604
NCBI-ProteinID:
XP_020696421
LinkDB
All DBs
Position
Unknown
AA seq
645 aa
AA seq
DB search
MSDGHLFNNILLGGRGGSNPGQLRVHSGGVAWRKAGGGKVVEVDKADITGVSWMKVPRAY
QFGVRVKDGLSYKFTGFREQDVSNLTSFIEKNIGVKPEEKQLSVSGRNWGDVEINGNMLT
FLVGSKQAFEISLADVAQSHLQGKNDVYLEFHVDDTTGANEKDSLMDLCFHIPNSNTQFV
GDENHPPAQVFLDKILARADVGSSSGDAVVTFDGIAVLTPRGRYSIELHLSFLRLQGQAN
DFKIQYSSVVRLFRLPKSNQPHTFVVVTLDPPIRKGQTMYPHVVIQFETESVVEGTLSIS
EELLATKFKGKLTEMSYKGLIHEEFTRILNALSGAKVTKPGSFRSCQDGYAVKSSLKAED
GLLYPLEKGFFFLPKPPTLILHDEIEYVEFERHGAGGSSVSSHYFDLLIKLKNDNEHLFG
NIQRNEYHNLFDFISGKGLKILNLGDGRVTNGVAAVLHNDDDDAVDPHLERIKNAAGGVE
TDDEDEDFIAEKDDSGSPTDTSEEEESDAIESGAEKEKPSKKDSKKEVVSKASSLKRKSK
DGDDDSKKRKQKKKKDPRAPKRAMSGFMFFSNAERENLKKANPGMSFTDIGRAFGERWKK
MSAEEKEPYEAMARADAKRYKEAMAGYKSGGPAINVDSGNESGSD
NT seq
1938 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacggacatctcttcaacaatatccttctcggaggccgcggaggatccaaccct
gggcagcttagggtccattctggtggagtcgcatggagaaaggcgggtggtgggaaggtg
gtcgaggtggacaaggctgatattactggtgtgagctggatgaaggttcccagggcttac
cagtttggagtccgggttaaagatggattgtcttacaagttcaccgggtttcgtgaacag
gatgttagtaatttgaccagcttcatagagaaaaatatcggagtaaagcctgaagagaag
cagctttcagtcagtggtcgaaattggggagatgttgaaataaatggaaacatgcttaca
tttctagttggttctaagcaagcatttgaaatttctcttgctgacgttgctcaatcacat
ctgcaagggaaaaatgatgtttacttggaattccatgtggatgacacaactggtgcaaat
gagaaagactcgttgatggatctatgttttcacatacccaattcaaatactcagtttgtt
ggagatgagaaccatcctccagctcaggttttcttggacaaaatattagctagggcagat
gttggatcatcaagtggagatgcagttgtcacatttgatggtattgcagtcctaacgcca
agagggcggtatagcatcgaacttcatctttcattcttgaggctccaagggcaggccaat
gatttcaaaattcagtacagcagtgtagttagactttttcggttgcctaagtccaatcag
cctcatacctttgttgtggttacccttgacccaccaatccgtaaagggcaaactatgtat
ccgcatgttgtcatacagtttgagacagaaagtgttgttgaaggtaccttgtcaattagt
gaggaactcctggcaacaaagtttaagggaaaattgacggagatgtcgtataaggggcta
attcatgaggagttcaccagaatactgaatgctttatctggtgcgaaggtcactaaacca
ggaagcttccgaagctgtcaagatggctacgcagtgaaatcatcccttaaagctgaagat
ggattgctatatccgcttgaaaagggatttttctttttgcctaaacctccaactctcatt
ttacatgatgagatcgagtacgttgaattcgaacggcatggcgctgggggctcaagtgtt
tcttcacactactttgatctgcttattaagctaaagaatgacaatgaacatttatttgga
aatatccaaagaaatgaatatcacaacctttttgactttattagtggaaaaggattgaag
atcttgaaccttggtgatggacgggttaccaatggtgttgctgctgttcttcataatgat
gatgatgatgctgttgatccacatcttgagcggattaaaaatgctgctggtggcgtggaa
actgatgatgaggatgaagattttattgctgagaaagatgatagtggatctccaactgat
acttctgaagaggaggaatctgatgctattgaaagtggggctgagaaagaaaaaccttct
aagaaagattctaaaaaggaagttgtgagtaaagcgtcatccttaaagaggaagtctaaa
gatggagatgatgattcaaagaagagaaagcagaagaagaagaaagatccacgagcacca
aaaagggcaatgtctggctttatgttcttttcaaatgctgaaagagagaatctcaagaaa
gcaaatcctggaatgtcatttactgatattggaagagcttttggggagagatggaagaag
atgtcagcggaggagaaagagccttatgaagcaatggccagggctgatgcaaagcgttac
aaggaagccatggctggatacaagagcggtggacctgcaattaatgtggattctggcaat
gaaagtggcagtgactaa
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