Dendrobium catenatum: 110109895
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Entry
110109895 CDS
T05027
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 46
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
dct
Dendrobium catenatum
Pathway
dct03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dct00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110109895
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dct03041
]
110109895
03009 Ribosome biogenesis [BR:
dct03009
]
110109895
Enzymes [BR:
dct01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
110109895
Spliceosome [BR:
dct03041
]
Complex A
U1 snRNP components
U1 related factors
110109895
Complex B
110109895
Ribosome biogenesis [BR:
dct03009
]
Eukaryotic type
Pre-60S particles
Helicases
110109895
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
WW
ERCC3_RAD25_C
T4SS-DNA_transf
Motif
Other DBs
NCBI-GeneID:
110109895
NCBI-ProteinID:
XP_020696760
LinkDB
All DBs
Position
Unknown
AA seq
1164 aa
AA seq
DB search
MAAAEAAQASAGPSFAPEDPTLPKPWKGLIDGSTGVLYYWNPETNVTQYEKPAGSAPPLP
TALPSSVSKLNAAPSQATQTIPLNGSLPQQHSGQQTLQQPYQLVQQQQQSQPQMPVQQSV
QQIPFQQLQQLPYQQQQPMQNQQPMQTLQQPSAHYSQLQQPPYQQIPYIQGQIMPRPQGQ
FPYQPGQQPQAFQFPYQQGQQLPGPKFSQDSTGQQPSEPQVGYQLGQQLQGPQTSQQQSQ
PLPVLRDTHEQGQNTQSQHTAQQQGMQPHVPQVPQFFRQQEMLLQGQQPSQQQSQQIGFT
GVGDAGHQETKVASLSPSMVQQPANSQSSGLPVHAQIRQSGANIFQPQLQSQLGGPGPLN
HKQAGMSQSHQMTGESSRHQMQTGSSMFPNQMGQSMPQPLMGSKTGYEDDHHDRGGSEFY
SSGRVEGPMMHSLQPKLAPLPIPQNKQDLRVGAIPPKFLSPGHAGGSSMRPGNAMPNTYS
HATFPNASPVRPPPRKFGAPDSPNISVDAYRQRHEVTASGDNIPAPFMTFEATGFPPEIL
REIHAAGFLYPTPIQAQTWPVALQNRDIVAIAKTGSGKTLGYVIPALIHLSRCRNNPQLG
PTVLILAPTRELATQIQEETLKFGRSSRISCTCLYGGAPKGPQLKDIERGVDIVVATPGR
LNDIIEMGKINFRQISFLVLDEADRMLDMGFELQIRKIVNEIPPRRQTLMYTATWPMEVR
KIAGDLLVDAVQVNIGSVDELVANKAITQYVEVLSQMDKQRRLEQILRSRERGSKVIIFC
STKKLCDQLAYSIGRPFGAIAIHGDKSQQERDNVLNQFRTGRFPILVATDVAARGLDIKD
IRVVINYDFPNGIEDYVHRIGRTGRAGATGVSYTFFTDQDWKHAHELVKLLEGANQGVPP
EVREMAVRSGPPPQRIPQHGGMNRWDSSGSNGGVRADHSGGRGMREFGRGGGNGRGFGGH
GGRGDFHVDGRGGNRGRGFSRGGWGGRHDRGGPRDRFQSSDGRGHYEGGRGRGRYGDRIR
DRSHSRSPEKSRTWKYNRSRSSSRSRSRSRSRSRSWSPRSPSRSRSPSPNRSYRPLPEGR
RRRVSGFDVPLSQVSAGVGLHEPEAPNRISGFEAPPSSTPAAGNVVPDSKPQISGFDPPL
AGHQMSPRSAGHANGTFTGAEIGN
NT seq
3495 nt
NT seq
+upstream
nt +downstream
nt
atggctgctgctgaggctgctcaagcgtcagcaggtccgagctttgccccagaagatcca
actctcccaaagccctggaaagggcttattgatggaagtactggtgtcttatattattgg
aatcctgaaacaaatgttacccaatatgagaaaccagctggttctgcacctccacttcct
acggctcttccttcttcagtgtcaaagctgaatgctgctcccagtcaagccacccaaacc
ataccattaaatgggtctttacctcaacaacattctgggcagcaaactcttcagcagcca
tatcaacttgtgcagcaacagcagcaaagtcagccacaaatgccggttcaacaatcagtt
cagcagataccgttccagcaattgcagcaactaccatatcaacaacagcaaccaatgcaa
aatcaacaacccatgcagactttgcagcagccttcagcgcattattcacagcttcagcaa
ccgccatatcagcaaattccatacattcaagggcaaatcatgccacgcccccaaggacaa
tttccatatcaaccagggcaacagccacaagcttttcagtttccataccagcaaggtcag
cagttaccgggaccaaaattctcacaagattcaactgggcagcagccttcggagcctcaa
gttggttatcaactggggcaacagcttcaagggccccagacttcacagcagcagagccaa
ccattgccagttctacgggacacacatgaacaaggacagaacacacagagtcaacatact
gcacagcagcagggaatgcagccacatgtgccacaagtgccacaattctttagacaacag
gagatgcttctacaagggcagcaaccttcacagcagcagtcacaacaaattgggtttaca
ggagtgggggatgccgggcatcaagagacaaaggtggcaagtctttccccatcgatggtc
caacaacctgccaactctcaatcatcaggcttacctgtacatgcccagattcgacaatct
ggagctaatatattccaaccacagctgcagtctcagcttggtgggccgggccctcttaac
cacaaacaagctggcatgagccaatcacatcagatgactggggaatctagccgtcatcaa
atgcaaacaggaagctccatgtttcctaatcaaatgggacaatcgatgcctcagcctctt
atgggttcaaaaactggttatgaagacgaccatcatgatagaggaggaagtgaattttat
tcctctggtagggttgagggaccaatgatgcattcattacagcctaaacttgcaccactt
cccattccacaaaataaacaggacttgagagtgggcgccattcctcctaagttcctctct
ccaggtcatgctggtggttcaagcatgcgaccagggaatgcaatgcccaacacatatagt
catgctaccttcccaaatgcaagtccagtgagaccacctccaagaaagtttggagcgcca
gattctccaaatatctcagttgatgcatatcgccagcgtcatgaagttacagcatcggga
gacaatattccagccccatttatgacatttgaagccactggattccctccagagatactg
agagagatacatgcagctggtttcttgtaccccacaccaatacaagcacaaacttggccg
gttgctttgcagaatagagacatagtggccattgccaaaactggttctggaaagacgctt
ggctatgtcattcctgctctaatacatcttagtagatgccggaataatccccagcttggt
cctaccgtgttgatattggctccaactcgtgagcttgcaacacagatacaagaagaaact
ttgaagtttggtcgatcttcacgaatttcctgcacatgcctctatgggggtgccccaaag
ggccctcagttgaaggatattgaacggggtgtggatattgttgtggcaacacctggtcgg
cttaatgacattattgaaatggggaagataaactttcggcagatatcttttcttgtgctt
gatgaagcagatagaatgcttgacatgggttttgaacttcagatccgtaagatagttaat
gagatacctccacgaagacagactctgatgtatactgctacttggcctatggaagtaagg
aaaatagctggtgatctgctcgtagatgctgtgcaggttaacattggcagcgttgatgag
cttgttgccaataaggccatcacacagtacgtggaagtgttgtcccaaatggacaagcag
agaaggcttgaacaaattcttagaagtcgggaacggggatccaaggtcatcatcttttgc
tccactaaaaagctctgtgaccagcttgcctacagtattggccgcccctttggtgctatt
gccattcacggagataagtctcagcaggaaagggacaatgttttaaaccaatttcgcact
ggaagattcccaattcttgttgctacagatgttgccgcccgtggactcgacattaaagat
atcagggtagttatcaattatgatttcccaaatgggatcgaggattatgtccaccgcata
ggtcgcactggcagggctggcgctacaggagtatcatataccttctttaccgatcaagat
tggaagcatgcccatgaactagtgaagctacttgagggtgcaaaccaaggcgttccgccg
gaagtccgagaaatggctgttcgttccggcccccctccccaaagaattccccaacatggt
ggaatgaaccgttgggattctagcggtagcaatggtggagttcgagcggaccatagtggt
ggtcgaggcatgagggaatttggtcgtgggggtggcaatggtcgaggatttggtggacat
ggtggtcggggcgacttccatgttgatgggcgtggggggaacaggggtcgtgggtttagt
aggggaggttggggtggtaggcatgaccgaggcggtccacgtgatcgttttcaaagctcc
gatggccgtggtcattatgaaggtggaagaggtagggggagatatggagataggatcaga
gaccgaagtcacagtcgcagtcctgagaaaagcagaacttggaaatacaatcggagtagg
agctccagccgcagccgtagccggagcaggagcagaagtaggagttggtctcctagaagc
cctagtcggagtaggagccctagtcctaataggagctatcgacctctacctgagggccgt
cgccgtcgggtatctggatttgatgttcccttgtcacaagtttcagcaggggttggactt
cacgagccagaggctccaaatagaatctcaggattcgaggctcccccctcatcaactcca
gcagctggtaatgtagttcctgattcaaagccccagatttctggatttgatccacccctt
gcaggtcatcagatgtcgccgaggtcagccggacatgccaatggaacgttcacaggagct
gagattggtaattag
DBGET
integrated database retrieval system
