Dendrobium catenatum: 110109956
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Entry
110109956 CDS
T05027
Name
(RefSeq) HBS1-like protein isoform X1
KO
K14416
elongation factor 1 alpha-like protein
Organism
dct
Dendrobium catenatum
Pathway
dct03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
dct00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
110109956
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dct03019
]
110109956
Messenger RNA biogenesis [BR:
dct03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
110109956
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
MMR_HSR1
GTP_EFTU_D2
GBP
G-alpha
Zn_ribbon_RanBP
SpoIVA_ATPase
AAA_22
GTP_EFTU_D4
RUBY_RBDX
Motif
Other DBs
NCBI-GeneID:
110109956
NCBI-ProteinID:
XP_020696849
LinkDB
All DBs
Position
Unknown
AA seq
716 aa
AA seq
DB search
MMGGVTDKVHNYFDGDQSMRGILSEQKKSASKHGFWRCLVCTYENDGSLSSCYICGVFKD
SFDGWINKGENQALGICEHSTSVMAKALFAGMPHQGTVISSLSDAFLRKDDLSSETRSTE
SLNNVQETLPASISKHSITIVPFRFDTLSPDDIVSLGRKKTKDHLATAIPATISSSSTDE
KEVVKILAEHDDPETSSALSSHLNGNRSNNLGINDNESEILVSKIHHLKLDKKIKNIKKV
MSPSQYKPEKWILSEQQQETKSQLNIAIVGHVDSGKSTLCGRLLHLLGKISKKEIHKYQK
EAKEKGKGSFAFAWAMDETAEERERGITMTVAIAYFESKKYRVVLLDSPGHKDFVSNMIS
GSTQADAAILLVDASKGSFEAGMGFHDVGQTKEHAQLIRSFGVEQIVVAVNKMDTVGYSQ
ERFNYIKSQLAAFLRSCGFKETLITWIPLSAMDNQNVVTSASNDHLSWYHGLCLLDAIDS
LYPPERDVLKPLLMPVCDVVSSHSLGQVAACGKLEAGAIRHGSKVPLGPFISILLMIFCC
DSLNYVQVLIMPSGDLATIRSIERDCQACLSARAGDNVAVSLQGTDVSNLVPSAVICHPD
FPVTVADILELKILVLDVKMPILLGSHVEFHIHHAKEAAQVTKIVSLLDQKKAKTSKIAP
RLLTARQSATIEVSLERPVCVEEFSSCRTLGRAFLRCSGITIAVGIVTRIIFADEQ
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
atgatgggcggtgtaacagataaggtccacaattattttgatggtgatcaatcgatgaga
ggaattttgtccgagcaaaagaaaagtgcaagcaagcatggcttttggagatgcttggta
tgtacatatgaaaatgatggcagcttatcctcttgctacatttgcggtgtatttaaggac
tcatttgatgggtggataaataaaggtgaaaatcaagcactcggcatctgtgaacattca
acatctgtaatggcaaaagcgctatttgcaggaatgccgcatcagggtactgtaatatcc
agtctctccgatgccttcttaagaaaagatgacttgtcctctgagactagaagcacagaa
agcttaaataatgttcaagaaacattgccggcttcaatttctaagcattctattactata
gtccctttcaggtttgacaccttatcgccggatgatattgtttcacttggaagaaagaaa
acaaaagatcatttggccacagcaattcccgccactatttcatcaagtagcactgacgag
aaggaagtggttaaaatcttggcagagcatgatgatccagagacttcatctgccctatca
tctcatttaaatggaaaccggagcaacaatttgggcattaatgataatgaatcagaaatt
cttgttagcaagatacaccatttgaagttggataagaagataaaaaatattaaaaaagtc
atgtcaccttcacagtacaagcccgagaagtggatattgtccgaacagcaacaagaaacc
aagagccagctgaatattgctattgttggtcatgttgactctggaaaatccaccttgtgt
gggagattgctccatcttttgggaaaaatctcaaagaaagagattcataaatatcagaaa
gaggctaaagaaaaggggaaggggtcatttgcatttgcatgggcaatggatgaaactgct
gaagagagagaaaggggtataacaatgacagtggcaattgcctacttcgagtcgaagaaa
taccgtgtggttttactcgactctccgggacataaagattttgtttcgaatatgatatct
ggttctactcaagcagacgctgccatacttcttgttgatgcgtccaagggttcttttgaa
gctgggatgggtttccatgatgttggacaaacgaaagagcatgcacaacttataaggagt
tttggtgtcgagcaaattgttgttgctgttaataagatggatactgttggatactctcag
gaaagatttaattacattaaatcccaactagccgcttttctgcgatcctgcggattcaag
gaaacactaatcacatggattcctttgagtgccatggataatcaaaatgtggtgacttcg
gcttctaatgatcacttgtcttggtatcatggtctctgcttgttggatgctatagactct
ttgtaccctccagaacgggacgtcttaaaaccacttcttatgcctgtatgtgatgttgtt
tcatcgcattcattaggccaagtagctgcatgtggtaaattggaagctggagctattcga
catggatccaaggtaccattaggtccttttatttctatcctcttgatgatcttctgctgt
gacagtttgaactacgttcaggttttaataatgccctctggagatttggctactattcga
tccatagagcgagattgccaagcatgcctttccgctagagcaggtgacaacgtggctgta
agtttgcaaggtactgatgtctccaatcttgtgcctagtgcggtgatatgccacccagat
ttcccagtaactgtagcagacattttggagcttaagatccttgttctggacgtcaaaatg
ccaatattacttggatctcatgttgaatttcacatacaccatgctaaggaggctgctcaa
gtgacaaaaatagtgtccctgttggatcaaaagaaagcaaagacctctaaaatagcacct
cgtcttctaaccgccaggcaaagtgctactatagaggtctctttagaaagaccagtctgt
gtggaagaattttctagctgtcggacacttggaagggcattcctgcgttgctctggaatt
accatagctgtcggcattgtgactaggataatattcgcggatgaacagtag
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integrated database retrieval system
