Dendrobium catenatum: 110109986
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Entry
110109986 CDS
T05027
Name
(RefSeq) protein TSS isoform X1
KO
K03255
protein TIF31
Organism
dct
Dendrobium catenatum
Brite
KEGG Orthology (KO) [BR:
dct00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
dct03012
]
110109986
Translation factors [BR:
dct03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
110109986
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_12
eIF3_p135
TPR_10
TPR_NPHP3
CLU_N
TPR_2
PAM2
TPR_8
TPR_MalT
TPR_9
CLU
TPR_16
ANAPC3
TPR_1
Motif
Other DBs
NCBI-GeneID:
110109986
NCBI-ProteinID:
XP_020696905
LinkDB
All DBs
Position
Unknown
AA seq
1707 aa
AA seq
DB search
MAPKAGRGRGAKGKGEKKKKEEKVVPNVIDITVITPCETRITLKGISTDKIIDVRKLLSS
NVETCHVTNYSLAHVARGQRLNDGVEIASLKPCVLRLVEEEYVREEDAVAQVRRLLDIVA
CTTVFARHQNRDGGGKARKQAAPPTSAAMAAGSPAISSAAAISVDDEFQELPVPAFSEEF
DMAAIQPQPKLGDFYDFFSFSNLASPIQFIRRREVDPSEKWREKEHFEIEVKVCNGKLLR
VVAGFKGFYSTGKHFIQSHSLVDLLHQRSRAFSNAYDSLMKAFVDHNKFGNLPYGFRANT
WLVPPVFAESPSKCPSLPVEDVMWGPKGHAWSFDCRKWSKDFATLAAFPCRTEEERLVRD
RKAFLLHNLFVETAVLKATSAIRKLIDSNASAAHGVLHGSVVHEENVGDLNIVVRRDFPD
ASGKLEEKVEGSQVLNISEEELAVRNILKGLTANESVVVNDTATLGIVIVKHCGYTATVK
VSPCVDHNNNSHHVFEIEDQPEGGSNTLNINSLRVLLHKLPDHESFVGCLPSCNDYVEVR
AGRCLVHRIISDSLYNLEKVLGFTEKAFRWELGTCWLQHLQKNKNSAVEGDNEKEEDNFV
EPIVKGFGKQFEQLKRIRKKTNTIHSKSVKEDSNVDDAQLKEISNAEKLEELEGNENYEL
KKRITEEAFKFLIDSGTGLHQKSIKELTKMAHRYYNDVALPKLVADLASLELSPVDGRTL
TDFMHTRGLKMSSLGRIVELAEKLPHVQSLCIHEMVTRSFKQLIRDVVAAVKNFSDIPYA
VATALNVLLGSTKGDKGDLGLSNDHGLKMKWLKAFILKKYSWKLRNEFQYLRKFVILRGL
CQKVGLELVARNYDFDSPNPFEKSDIIGIIPVYKHVVCLSIDARNLLESSKTALDKGKLE
DAVSYGTKALSKMIAVCGPYHRMTANAYSLLAVVLYHTGDFNQAAIYQQKALDINEREIG
LDHPETMKSYGDLSVFYYRLQHIELALKYANRALYLLHFSCGLSHPNSAATYINVAMMEE
GRGNANVALRYLHEALKCNQRLLGADHIQTAASYHAIAIALSMMEAYSLSVQHEQTTLQI
LQAKLGSEDLRTQDSSAWLEYFESKALEQQEAARKGMPKPDASIACKGHLSVSDLLDYIN
PDPDMKEKDIQRKQRHTKSNNKPNQEQSVTNPDDGCLISNPKNHEQIEASRQEEKPKEPH
FGIKEGTEILLVSKEESSDEGWQEASFRGKSNQMRWKSDSRRPAISKLVANNSGSYSTVS
VGSKTRTISPNSKFIFDGASSSTDVPSVGKLWNSSSSVGEEANKPQPAIPDIEAISEHHL
KASGTSRLCAVASRFVSYKEVAMSPPGTVLKPVAEQTVQVKDKSNDPHVQNKGVEKIKDE
NETCEDLEESPSDESDKEAHSNEAVEADREEKPSTSSDEVQEFSDSKKEMTSRSSLSASA
PPFNPGSLLSMSHPYNSVAVDGIYNARDFQKSAAHELLEIPSAESVDLRVSRGPRSTIYY
RTVHSFRRKARYASSNNGFSNRNSNSQSIMNPNAAEFVPAKGWRQEVEKSAVVGEEAQTP
KNASFKQQEFTNVSRNGTSDILYSQEERKVEKPDKLVISNGNGRNDTKSLQKTELGRQIL
LNLVVKSFQHSLISSSETEVTSGLAKNKHSKAQLSQSSNSVQFKTGRTNNSKKQDAEGFT
IVSKRRSAKHQFPSEVNGLYAQQSICT
NT seq
5124 nt
NT seq
+upstream
nt +downstream
nt
atggctccgaaagctggccgcggcaggggagcgaaaggcaaaggcgagaagaagaaaaaa
gaggaaaaagtagttcctaatgtgattgatataactgtaataactccatgcgagactcga
attacactgaagggaatatccactgataagataatagatgtgaggaagttattaagctca
aatgttgagacatgtcacgtgacaaactactcgctggcgcacgtggcacgggggcaacgg
ttgaatgatggcgtggaaatcgcgtctctcaagccttgtgtgctgcgactggtggaagag
gaatatgtgagggaagaggatgccgttgcgcaagtgcggaggttgctggacatcgtcgct
tgcacgactgtgttcgcgaggcaccagaacagggatgggggcggcaaagcccgaaagcag
gcggcgcctcctacttcggccgcaatggccgccggttctccagctatatcgtcggccgct
gccatctccgtcgatgatgagtttcaggagcttcccgttcccgccttttccgaggagttt
gacatggcggccatacaaccacaaccgaagctcggcgatttctatgattttttctccttc
tccaacttagcctctcccatccaatttataaggaggcgcgaagtagatccttccgagaag
tggcgagaaaaggagcactttgagattgaggtcaaggtttgcaatggaaaattactacgt
gtggtggcgggatttaaaggtttctacagcaccggaaagcattttattcaaagccattct
cttgtagatctactgcaccagcgcagcagggcgttttccaacgcctatgattccctgatg
aaagcttttgtagaccataacaagtttgggaatctaccatatggatttcgggcaaacaca
tggcttgtgcctccagtgtttgctgaatctccttctaaatgtccctcgttgccagtagaa
gatgtcatgtggggaccaaagggtcatgcatggagttttgactgcagaaaatggtctaaa
gatttcgcaactttggctgcatttccatgcagaactgaagaagaaagactggttcgagac
cgcaaagcttttttgcttcacaatctgtttgtggaaactgcagtgttgaaagctacatca
gcaattcgtaaacttattgattccaatgcaagtgctgcccatggtgttttgcatggttcg
gtagtgcatgaagaaaatgttggagatctgaacatagttgtaagaagggactttcccgat
gctagtggaaaactggaggagaaggttgaggggagccaagtgctgaatatctctgaagaa
gagcttgcagtaaggaatattctcaaaggtttgacagctaatgagagtgtggttgtcaat
gatactgcaacactgggcatagtcattgtaaaacattgtggatatactgccactgttaaa
gtgtcaccttgtgtggatcacaataataattctcatcatgtttttgagatagaagaccaa
ccagaaggtggttctaatactttgaacataaacagcttaagagtgcttctacacaagttg
cctgatcatgaatcatttgtgggatgcctaccttcttgtaatgattatgttgaagtaagg
gctggaaggtgtttggttcacagaataattagtgatagtctatacaatctagaaaaggtg
cttggctttactgagaaggcattcagatgggaacttggaacttgttggcttcagcacttg
cagaaaaataagaattcagcagttgagggtgataatgaaaaagaggaagacaattttgtt
gaaccaattgttaaaggttttggaaagcaatttgaacagttaaaaagaataagaaagaaa
acaaacaccatccatagcaagtctgtcaaggaagattctaacgtcgatgatgctcaatta
aaagaaattagtaatgcagagaaactagaagaacttgaaggaaatgagaactatgaattg
aagaaaaggataacagaagaagcttttaagtttttgatagattctggcactggtcttcac
caaaagtcaattaaagagctcaccaagatggcacatagatattataatgacgttgctctt
ccaaagctggtagcagatttagcatcacttgagttatctcccgttgacggaagaaccctt
actgacttcatgcatacacgtggtcttaaaatgtcctccttgggccgtattgttgagctt
gcagagaagctcccacatgtacagtcactctgtattcatgagatggtcactcgatccttc
aagcaattaataagagatgtggttgctgctgttaagaacttctcagatattccttacgca
gttgctacagcactgaatgtcttgttaggatccaccaaaggggataaaggagacctgggc
ttgtctaatgatcatggactcaagatgaagtggctcaaagcctttatcttaaagaagtat
tcgtggaagctacgaaatgagtttcagtatttgagaaagtttgtgattcttagagggctt
tgtcaaaaggtggggctggagctggttgctagaaattatgattttgatagtccaaatcct
tttgagaaatctgatattatcggcataattcctgtatataaacatgtcgtgtgcttatcc
atagatgctaggaacttattggagtcatcaaagacagcactagacaagggaaagctagag
gatgctgttagctatggcacaaaggcactatcgaaaatgatagccgtgtgcggtccgtac
catcgaatgactgccaatgcttacagtcttctcgctgttgtcctataccatactggagat
ttcaatcaggcggccatatatcagcagaaggcgttggatattaatgaacgggagattgga
cttgaccatccagagaccatgaaaagttatggggatctttctgtgttttactaccgtctg
cagcacattgaattggctttgaagtatgctaaccgtgcgctctatcttcttcacttttcc
tgtggattgtcacacccaaattctgccgcaacctatattaatgttgcaatgatggaggag
ggaagagggaatgctaatgttgctttaagatacctgcatgaagccctcaagtgcaatcaa
cgattattgggggccgatcacattcaaacagctgcaagctatcatgcgattgccatagcc
ctttcaatgatggaagcatattccctcagtgtgcaacatgaacaaactactttgcagata
ctgcaagctaaactaggatctgaagatctgcgcactcaggattcgtctgcttggcttgaa
tactttgaatctaaagctttggaacagcaagaggctgcacgtaagggcatgcccaagcct
gatgcatcaattgcctgcaaaggtcacctcagtgtatcagatctccttgattacataaat
ccggacccggatatgaaggaaaaggacatacagagaaaacagaggcataccaagagcaat
aataaacccaatcaagagcagtcagttacaaatccagatgatggatgcctcataagcaac
ccgaaaaatcatgagcagatagaagcatccagacaagaggagaagcctaaagaacctcat
tttggaattaaggaaggtactgagattcttctggtatccaaagaagagtcttctgatgaa
gggtggcaggaagccagcttcagaggaaaatctaatcaaatgcggtggaaatctgattca
agacgacccgccatttctaagttagtagcgaacaactcggggtcatattctaccgtaagt
gtcggttctaagacaagaaccatatcaccaaattctaagttcatctttgatggagcaagc
tcctccacagatgtcccttcagttggaaaattgtggaactcttcaagttcagtgggagaa
gaggctaataaacctcaaccggctatccctgatatagaggctatttcagaacaccacctt
aaggcttctggtacgagcaggctctgtgctgtggcttccaggtttgtgtcctacaaagaa
gtagccatgtcacctcctggcactgttttaaagcctgtagctgaacaaactgttcaagtt
aaggataagtccaatgatccacatgtgcaaaacaagggggtagagaaaatcaaggatgaa
aatgagacatgcgaggatttggaagaatctccttctgatgaaagtgacaaagaggctcac
tcaaacgaagcagtggaggcagatagggaggagaaaccttctacaagttctgatgaggtt
caggaattttctgattccaagaaagaaatgacaagcagaagcagcttgtcagcttctgct
cctccatttaatccagggtctctgctttcaatgtctcatccatataactcggttgcagtt
gatggcatatataatgcaagagattttcagaagagtgcagcacatgagcttttggaaatt
ccttctgctgagtctgtagatcttagagtctctcgtggtcccagatccacaatttactat
aggactgtgcattctttcaggaggaaagctcgttatgcaagttccaacaatggcttttcc
aatagaaatagcaactctcagagcatcatgaatcctaatgctgctgagtttgttccggct
aagggttggcgccaagaagtagaaaaatctgcggttgtcggcgaagaagctcaaactcct
aaaaatgcatcttttaagcagcaagaatttacaaatgtttcaaggaatggaacttccgat
attctttactcgcaagaggaaagaaaagtagagaaacctgataaactagtgattagcaat
ggcaatgggagaaatgacactaagagcctacaaaaaactgagcttggacgacaaattctt
ctcaacttagttgtgaaatcatttcagcatagtctgatctcttcatctgagactgaggtt
acttcaggtcttgctaaaaacaagcacagtaaagcgcagctctcccaatcttcaaactct
gtgcagtttaagacgggaagaactaataacagcaagaaacaagatgcagaaggatttaca
atcgtctcaaagcggaggagcgccaagcatcaattccctagtgaagtgaacggcttgtat
gcccagcaatctatctgtacctaa
DBGET
integrated database retrieval system