Dendrobium catenatum: 110110075
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Entry
110110075 CDS
T05027
Name
(RefSeq) small RNA degrading nuclease 5
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
dct
Dendrobium catenatum
Pathway
dct03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
dct00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
110110075
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
dct03009
]
110110075
Ribosome biogenesis [BR:
dct03009
]
Eukaryotic type
Pre-60S particles
RNases
110110075
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_T
Nup96
XFP_N
Phosphodiest
Motif
Other DBs
NCBI-GeneID:
110110075
NCBI-ProteinID:
XP_028555848
LinkDB
All DBs
Position
Unknown
AA seq
588 aa
AA seq
DB search
MQTLAAAPAVGLFSRRPRLAAINMDVMGSSSGTTPENPAAAKEAGNNPAFFDIYGPDGKA
DVVWKTSSTSSSISLQDIQGLVTWVLGEGVMPTWIFVKNKPLIRKVVMLHVPGLDAALYM
SNSVILRGLAGCCGIPKPVLSLSCMADEMQTVDALLTCKVKRKREQIDSKSEEASKVVQG
KAHSIEAENDSPFPYLYYTLSKKELEENGYCFSKSDFVPTVPAPSGTPPYDILSLDCEMC
VTAMGFELTRVTLVNIAGEVLLDELVKPSNAIIDYNTRFSGITEEMLNDVMTTLEDVQKD
FLKYVYKETILVGHSLENDLSALKISHNVIIDTAILYKQPRSGTRKPALRVLSWKFLTRK
IQVPGEGHDSIEDARAAMDLALLKIKNGPEFGSRSSLMRCKLVSVLHEGGKKCSLVDDSS
IIRRFSDGACNVIPVYSDEEALSKALKEVKNENVSFVWTRFSRLHSYWKMQTQNTETLKY
RVAEMVSMLTCNSKSAKQEISHMTSSSELKVILSEIDERIQKLYDALAGNTLFIVSTGHG
DTAIVQRLRNMLKDAFEPSVRQEDVLRVLEELQAQAEVSLCFAIVKHW
NT seq
1767 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaccctcgcggccgcgcctgccgttggcctttttagccgtcgtcctcgactcgct
gccattaacatggatgtcatgggatcatcttccggtacaacccctgaaaaccctgccgcg
gcgaaggaagcaggcaacaaccctgccttcttcgacatatacggtcctgatgggaaggct
gatgttgtttggaaaacttcttcaacttcttcatcaatcagcctccaggacattcaaggg
cttgttacttgggttctaggtgaaggtgtgatgccaacttggatttttgtaaagaacaag
cctcttatacggaaagttgtcatgcttcatgttccaggcttggacgctgcactttatatg
tctaattccgtgattttaagaggccttgcaggttgctgtggcattccaaagcctgtttta
tccctcagctgcatggcagatgagatgcaaaccgttgatgcacttttaacttgcaaagtg
aaacgaaagcgagagcaaattgattccaaatctgaggaggctagcaaagttgtacaagga
aaggcacatagtatcgaggctgaaaatgattcaccttttccgtacttatactacaccctt
tcaaagaaggagctggaggaaaatggttattgcttcagcaagtcagattttgtccccact
gttcctgctccttctggtacacctccgtatgatatcctgtcactcgactgtgagatgtgt
gtgactgccatgggttttgaacttacacgagtgaccttggttaacatcgcaggagaggtg
ttactagatgaacttgttaagccttcaaatgctatcatcgactacaatactaggtttagt
ggtatcacagaggagatgcttaatgatgttatgacaacgcttgaggatgttcagaaagat
tttctgaaatatgtctacaaggaaacaattctagttgggcactccctggagaatgacctc
tcagcactgaagatttctcataatgtaataattgatactgctattttgtacaagcaacca
cgttctggaacccggaaaccagcattaagagttttatcatggaagtttctcactcggaag
atacaagttcccggagaagggcatgacagcattgaagatgcaagagctgcaatggatttg
gcgctgttgaagattaaaaatggacctgaatttggatcacgttcatcactgatgcgatgc
aagttggtctctgtcttgcatgaaggtggcaaaaaatgctcccttgtagatgattcgtcc
ataataagaagattttctgatggagcatgcaacgtgattcctgtttattcagatgaagaa
gctctttcaaaagccttaaaagaggtaaagaatgaaaatgtaagctttgtttggactcga
ttttcaagacttcactcatattggaagatgcaaacacaaaatacagagacgttgaagtat
cgggttgctgaaatggtttcaatgctgacctgtaatagtaaatcagccaagcaagaaata
agtcatatgacttcaagctctgaattgaaagtaattttatctgaaattgatgaaagaatt
caaaagctctatgatgcgttggctggaaatactttatttatagtatccactggccatggg
gatacagctattgttcagagacttcggaatatgctcaaggatgcctttgaaccttcagtc
agacaggaggatgtccttcgagtcttggaagagctccaagctcaggcagaagtctctctg
tgttttgctattgtcaagcactggtaa
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