KEGG   Dendrobium catenatum: 110110075
Entry
110110075         CDS       T05027                                 
Name
(RefSeq) small RNA degrading nuclease 5
  KO
K14570  RNA exonuclease [EC:3.1.-.-]
Organism
dct  Dendrobium catenatum
Pathway
dct03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:dct00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    110110075
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:dct03009]
    110110075
Ribosome biogenesis [BR:dct03009]
 Eukaryotic type
  Pre-60S particles
   RNases
    110110075
SSDB
Motif
Pfam: RNase_T Nup96 XFP_N Phosphodiest
Other DBs
NCBI-GeneID: 110110075
NCBI-ProteinID: XP_028555848
LinkDB
Position
Unknown
AA seq 588 aa
MQTLAAAPAVGLFSRRPRLAAINMDVMGSSSGTTPENPAAAKEAGNNPAFFDIYGPDGKA
DVVWKTSSTSSSISLQDIQGLVTWVLGEGVMPTWIFVKNKPLIRKVVMLHVPGLDAALYM
SNSVILRGLAGCCGIPKPVLSLSCMADEMQTVDALLTCKVKRKREQIDSKSEEASKVVQG
KAHSIEAENDSPFPYLYYTLSKKELEENGYCFSKSDFVPTVPAPSGTPPYDILSLDCEMC
VTAMGFELTRVTLVNIAGEVLLDELVKPSNAIIDYNTRFSGITEEMLNDVMTTLEDVQKD
FLKYVYKETILVGHSLENDLSALKISHNVIIDTAILYKQPRSGTRKPALRVLSWKFLTRK
IQVPGEGHDSIEDARAAMDLALLKIKNGPEFGSRSSLMRCKLVSVLHEGGKKCSLVDDSS
IIRRFSDGACNVIPVYSDEEALSKALKEVKNENVSFVWTRFSRLHSYWKMQTQNTETLKY
RVAEMVSMLTCNSKSAKQEISHMTSSSELKVILSEIDERIQKLYDALAGNTLFIVSTGHG
DTAIVQRLRNMLKDAFEPSVRQEDVLRVLEELQAQAEVSLCFAIVKHW
NT seq 1767 nt   +upstreamnt  +downstreamnt
atgcaaaccctcgcggccgcgcctgccgttggcctttttagccgtcgtcctcgactcgct
gccattaacatggatgtcatgggatcatcttccggtacaacccctgaaaaccctgccgcg
gcgaaggaagcaggcaacaaccctgccttcttcgacatatacggtcctgatgggaaggct
gatgttgtttggaaaacttcttcaacttcttcatcaatcagcctccaggacattcaaggg
cttgttacttgggttctaggtgaaggtgtgatgccaacttggatttttgtaaagaacaag
cctcttatacggaaagttgtcatgcttcatgttccaggcttggacgctgcactttatatg
tctaattccgtgattttaagaggccttgcaggttgctgtggcattccaaagcctgtttta
tccctcagctgcatggcagatgagatgcaaaccgttgatgcacttttaacttgcaaagtg
aaacgaaagcgagagcaaattgattccaaatctgaggaggctagcaaagttgtacaagga
aaggcacatagtatcgaggctgaaaatgattcaccttttccgtacttatactacaccctt
tcaaagaaggagctggaggaaaatggttattgcttcagcaagtcagattttgtccccact
gttcctgctccttctggtacacctccgtatgatatcctgtcactcgactgtgagatgtgt
gtgactgccatgggttttgaacttacacgagtgaccttggttaacatcgcaggagaggtg
ttactagatgaacttgttaagccttcaaatgctatcatcgactacaatactaggtttagt
ggtatcacagaggagatgcttaatgatgttatgacaacgcttgaggatgttcagaaagat
tttctgaaatatgtctacaaggaaacaattctagttgggcactccctggagaatgacctc
tcagcactgaagatttctcataatgtaataattgatactgctattttgtacaagcaacca
cgttctggaacccggaaaccagcattaagagttttatcatggaagtttctcactcggaag
atacaagttcccggagaagggcatgacagcattgaagatgcaagagctgcaatggatttg
gcgctgttgaagattaaaaatggacctgaatttggatcacgttcatcactgatgcgatgc
aagttggtctctgtcttgcatgaaggtggcaaaaaatgctcccttgtagatgattcgtcc
ataataagaagattttctgatggagcatgcaacgtgattcctgtttattcagatgaagaa
gctctttcaaaagccttaaaagaggtaaagaatgaaaatgtaagctttgtttggactcga
ttttcaagacttcactcatattggaagatgcaaacacaaaatacagagacgttgaagtat
cgggttgctgaaatggtttcaatgctgacctgtaatagtaaatcagccaagcaagaaata
agtcatatgacttcaagctctgaattgaaagtaattttatctgaaattgatgaaagaatt
caaaagctctatgatgcgttggctggaaatactttatttatagtatccactggccatggg
gatacagctattgttcagagacttcggaatatgctcaaggatgcctttgaaccttcagtc
agacaggaggatgtccttcgagtcttggaagagctccaagctcaggcagaagtctctctg
tgttttgctattgtcaagcactggtaa

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