KEGG   Dendrobium catenatum: 110110378
Entry
110110378         CDS       T05027                                 
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB7
  KO
K03015  DNA-directed RNA polymerase II subunit RPB7
Organism
dct  Dendrobium catenatum
Pathway
dct03020  RNA polymerase
dct03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:dct00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    110110378
  09124 Replication and repair
   03420 Nucleotide excision repair
    110110378
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:dct03021]
    110110378
   03019 Messenger RNA biogenesis [BR:dct03019]
    110110378
   03400 DNA repair and recombination proteins [BR:dct03400]
    110110378
Transcription machinery [BR:dct03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     110110378
Messenger RNA biogenesis [BR:dct03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     110110378
DNA repair and recombination proteins [BR:dct03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      110110378
SSDB
Motif
Pfam: S1 SHS2_Rpb7-N
Other DBs
NCBI-GeneID: 110110378
NCBI-ProteinID: XP_020697478
LinkDB
Position
Unknown
AA seq 177 aa
MFFHITLERNMQLHPRHFGPHLRDKLVAKLMKDVEGTCSGRHGFVVAITSVEDIGKGLIR
EGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ
SEDVSNYTTSDGSVKIQKDSEVRLKIIGTRVDATEIFSIGTIKDDFLGVINDPGAAS
NT seq 534 nt   +upstreamnt  +downstreamnt
atgttctttcacattacgttggagaggaatatgcagctccaccctcgccattttggccct
catcttcgcgacaagctcgttgcgaaactcatgaaggacgtcgagggtacttgcagcgga
aggcatgggttcgtcgtggcgataacaagcgtagaggacattggaaaggggttgatacgt
gagggcacgggctttgtcactttccctgtaaagtaccagtgcgtcgtttttcgcccattc
aagggggagatccttgaagccgtcgtcactatggttaataagatgggtttctttgctgag
gctggtcctgtgcagatcttcgtgtcaaatcacctcatcccagatgatatggagtttcag
tcggaagatgtgtctaactacacaacctctgatggctcggtcaaaatccaaaaagatagt
gaggtgcggttaaagatcattggtactcgagttgatgccacggaaattttctccattggc
actatcaaagatgatttcttaggcgtcatcaatgatcctggtgcagcttcctga

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