Dendrobium catenatum: 110110410
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Entry
110110410 CDS
T05027
Name
(RefSeq) sm-like protein LSM1B
KO
K12620
U6 snRNA-associated Sm-like protein LSm1
Organism
dct
Dendrobium catenatum
Pathway
dct03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dct00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
110110410
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dct03019
]
110110410
Messenger RNA biogenesis [BR:
dct03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
110110410
mRNA degradation factors
5'-3' decay
Lsm complex
110110410
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
Hfq
Motif
Other DBs
NCBI-GeneID:
110110410
NCBI-ProteinID:
XP_020697531
LinkDB
All DBs
Position
Unknown
AA seq
128 aa
AA seq
DB search
MSWAGAEELFLSTSLASYLDKKLLVLLRDGRKLLGILRSFDQFANAVLEGACERVIVGDL
YCDISLGLYVIRGENVVLIGELDLERDELPSHMINVSPAEIRKAQKAERDATDLKGSMRK
RMEFLDLD
NT seq
387 nt
NT seq
+upstream
nt +downstream
nt
atgtcttgggcgggcgcagaagaactttttttatccacttccctcgcgagctatcttgac
aagaagctccttgttttgctaagagatgggagaaaactgttgggcattcttcggtctttt
gatcaatttgcaaatgctgttcttgaaggggcttgtgagagagtaattgttggagatctc
tactgtgatatctctctgggtctgtatgtaatccgcggagagaatgtagttttgattgga
gagctggaccttgagagggatgagctcccttcacatatgataaatgtttcaccagcagag
ataagaaaggcccaaaaagcagaaagggatgccacagatctgaaaggctccatgcgaaaa
cgaatggagttcctcgacttagattag
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