Dendrobium catenatum: 110110448
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Entry
110110448 CDS
T05027
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 20 isoform X1
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
dct
Dendrobium catenatum
Pathway
dct03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dct00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110110448
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dct03041
]
110110448
03009 Ribosome biogenesis [BR:
dct03009
]
110110448
Enzymes [BR:
dct01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
110110448
Spliceosome [BR:
dct03041
]
Complex A
U1 snRNP components
U1 related factors
110110448
Complex B
110110448
Ribosome biogenesis [BR:
dct03009
]
Eukaryotic type
Pre-60S particles
Helicases
110110448
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
110110448
NCBI-ProteinID:
XP_020697593
LinkDB
All DBs
Position
Unknown
AA seq
670 aa
AA seq
DB search
MNPFDSRYADPYSYRERRSDLLQAPHFTAPSVNPAGFHGTFYPPPTQPFPAGGSNIPLIP
PYGGGSGPGGERGVDSVSGGGRGHEVGGRGRGHEFGGRGRGHQFGGRGRGHEVAGRGRGH
EVGGRGGRGVEVSRGVRAGGGRGGSGGRGGSGGRGGAARRGGGRDFGTRGRGGGFGGRGF
SSEKRDFSKPRDDLDNIVLPKQNFHGLIPFEKDFYVESPSVKAMSEQEATLYRRRRDITV
EGYDIPKPIRFFQEANFPDYCLQVITKCGFVEPTPIQSQGWPMALKGRDLIGIAETGSGK
TLAYLLPAIVHVNAQPRLANGDGPIVLILAPTRELAVQIQEEAAKFGSHSNVRSTCIYGG
APKGPQIRDLKRGVEIVIATPGRLIDMLEACHTNLRRVTYLVLDEADRMLDMGFEPQIKK
IISQIRPDRQTLYWSATWPREVEALARRFLNNPYKVIIGSPDLKANQSINQFIEVISDHE
KYPRLVKLLGELMDGNRILIFLETKKGCDQITRQLRTNGWPALSIHGDKVQAERDWVLAE
FKSGKSPIMTATDVAARGLDVKDIKCVINYDFPSSLEDYVHRIGRTGRAGAKGTAFTFFT
QSNARYARGLVKILQEAGQSVSPALAGIARSSGSTGGGATGNFRSRGRGFGNRPLRSGSN
TVPLAGKKAW
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
atgaatccgttcgactctagatacgccgatccatattcatacagggagagaagaagtgac
ttgctccaagcaccgcatttcaccgctccgtcggtgaaccctgccggttttcatggtacg
ttctaccctcctcccactcaacccttcccagccggtggttcaaatataccattgatacct
ccctatggtggcggctctggaccagggggggagagaggggttgattctgtgagtggaggt
ggcagaggacatgaggtcgggggccgtggcagagggcatgagttcgggggccgtggcaga
gggcatcagtttgggggccgtggtagagggcatgaggtcgcgggccgtggcagagggcat
gaggttgggggccgtggaggaaggggggttgaagttagccggggagtcagagcaggagga
ggaagaggaggatcaggaggaagaggaggatcaggaggaagagggggagcagcacgaaga
ggaggaggcagggattttggtaccagggggcgaggtggcgggtttggtggtcgtggtttt
agtagtgaaaagagggattttagcaaacctagggatgatctggacaacattgtgctgcct
aagcagaactttcatgggctcataccgtttgagaaagacttctatgtcgagagcccttcc
gttaaggccatgtcggagcaggaggcgacgctctaccgcagaaggcgggatattacggtt
gaaggatatgatatccctaagcccatcaggttcttccaggaagctaactttccagattac
tgcctccaagtgattacaaaatgtggttttgttgaacctacacctattcagtctcaaggt
tggcccatggctttgaaggggagagacttaattggtattgcagagactggttcagggaaa
accctggcttatcttcttccagcaatagttcatgttaatgctcaaccacgattggccaac
ggtgacggtcctattgttttgattcttgccccgacaagagaactagcggttcagatacaa
gaagaagctgcaaagtttggttcgcattcaaatgttagaagcacatgtatctatggagga
gcaccaaaaggaccacaaattcgtgatttgaaaagaggagttgagattgtaattgcaaca
cctggtagattgattgatatgctggaagcttgtcatacaaatttgcgtagagtaacttac
cttgtactggatgaggcagaccgcatgttggacatgggatttgaaccgcagataaaaaag
attatctcacagattcgtccagataggcagacattgtactggagtgcgacttggccaaga
gaagttgaggctttggcccgacgctttttaaataatccttacaaggttatcattgggtca
cctgatttaaaagcaaaccaatcaataaatcaattcattgaggttatatcagatcatgaa
aaatatcccaggctcgtaaaattgttgggtgagttgatggatggaaatcgtatccttatt
tttcttgagacaaagaaaggttgtgaccaaattactcgacaacttaggacgaatggatgg
cctgctttatctattcatggtgataaagttcaagctgaaagagattgggttcttgcagag
tttaagagtggaaagagtcctataatgactgcaactgacgtagctgctcgcggtcttgat
gtgaaggatataaaatgtgtgatcaattatgatttcccgtctagcctcgaggattatgtg
cacaggatcggtcggaccggtcgcgctggcgccaagggaaccgccttcacctttttcacc
cagtcgaatgcgagatatgcccggggccttgtcaaaatattgcaggaggctggccagagt
gtttctcctgcacttgcaggcatagcaaggtcaagtggttctacaggtggaggagccaca
ggaaacttccggtctcgcggtcggggctttggtaatagaccgctgaggtcgggttcgaat
actgttccacttgctgggaagaaggcatggtga
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