Dendrobium catenatum: 110110464
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Entry
110110464 CDS
T05027
Name
(RefSeq) THO complex subunit 2
KO
K12879
THO complex subunit 2
Organism
dct
Dendrobium catenatum
Pathway
dct03013
Nucleocytoplasmic transport
dct03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dct00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110110464
09122 Translation
03013 Nucleocytoplasmic transport
110110464
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dct03019
]
110110464
03041 Spliceosome [BR:
dct03041
]
110110464
Messenger RNA biogenesis [BR:
dct03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
110110464
Spliceosome [BR:
dct03041
]
Complex C
Other components
EJC/TREX
110110464
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
110110464
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tho2
THOC2_N
Thoc2
Motif
Other DBs
NCBI-GeneID:
110110464
NCBI-ProteinID:
XP_028556037
LinkDB
All DBs
Position
Unknown
AA seq
1898 aa
AA seq
DB search
MTSKCPEFKFVTEGCLQEWKASNSNFKLPEPVSMIRFLYELCWAMIRGELPLQKCKLALD
SATFSDGKKEEIGSMLVDIIAHLGQDLTMPVEYRSRLTKMAKWFAESSLVPSRLLQERCE
EEFLWESELSKLKANELKSKEVRINTRLLYQQTKFNLLREESEGYSKLVTLLCQNGVDAA
NQTTSFGIISIIKSLIGHFDLDPNRVFDIVLECFELYHDNNIFYSLIPIFPKSHAAQILG
FKFQYYQRIEVSSPVPSGLYRLAALLVKSDFIDLDSICAHLLPKDEEAFEHYDALIAKRF
EEANKIGKINLAATGKDLMEDEKQDVTVDLFTALDMESEAVMEHAAEVENNQSFGLLIGF
LSIDDWYHAQVLFDRLSHLNPVAHILVCEGLFRAIEKSIASSYDIVCHKRLQNIGNSFTT
CSDTTESVITSSIPVPQVDLSRDLFQMLAAAGPYLHRDTILLQKVCRVLRAYYLSAQESA
SVAGNLLSHVTGDVTRKHPGFQAKEARLRVEEALGACLLPSLQLIPANPAVGQGIWEVLS
LLPYEARYRLYGEWEKDDECIPMVLAARQIAKLDTRRLLKRLAKENLKQLGRMVAKLAHA
NPMTVLRTIVHQIEAYKDMITPVVDAFKYLTQLEYDILEYVVIERLAQGGREKLKDDGLN
LSDWLQSLASFWGHLCKKYPSMELRAFLLFFYLPDSCSPNEEQGLSDLKGSVGMVIVCFS
QMRPSSMRSNRHAVKSSGDNHDSESKNLQATKLDGDIIISSIANGTSISSICKIVGELDV
GSTFKLFSERLFFFMFYFLLMQALSKSTMRLRDSLLPKEEPKLAIPLLLLIAQHRSMVVI
HADAPYIKMVSEQFDRCHGTLLQYVEFLLSAVTPTSSYAQLIPSLNDLVHQYHLEPEVAF
LIYRPVLRLFKCNSPEVFWPLDAMEETLVTIEGNDVEQSSSNIVLDLGTSKNLITWVDLL
EGVRSMLPVKAWNSLSPDLYATFWGLTLYDLYVPRNRYEAEIAKQHAAIKALEELSDNSS
MAITKRKKDKERIQELLDRLASELQKHEQHVASVHHRLRREKDKWLSSCPDTLKINMEFL
QRCIFPRCIFSMPDAVYCAKFVHMLHSLGTPFFNTVNHIDVLICKTLQPMIFCCTEYEAG
RLGRFLYETLKMAYYWKSDESIYERECGNMPGFAVYYRYPNSQRVAYGQFVRVHWKWSGR
MTRLLAQCLESTEYMEIRNALIILTKISTVFPVTRKSGVNLEKRVVKIKGDEREDLKVLA
TGVAAALAARKSSWVSEEEFGMGYLDLKPAASPAKPLTINLGSLPNGSTPSVSQNQNEMI
GSRNSSAVNLPVDHTGREQMISARSAEGRSERPENSAPMKSDLAQQRSRVISSTNGLPSQ
STLSSSHQSIMSSKAPGNFKNTEELNRVLAIEPESKSQFKRSAQSSVGKQTKQEVAKEDA
KSGKSIGRAANQASASSDRDSAHPSEGRQSGIAITAAANNGNSIQPSGKVPASASRTDLH
GSLLRTETGASKPSDNNTEISENSKSVSVRALHAPLPDDSSSKQQKRTITVEEQDRISKR
RKGDSEGKDDYVFDARLLDKAHLLDHERINTDEQYQNRSTEKLLEKLKDKGSERLDKEHK
ERPDRSDVNRGEDIHDKSRDRSMERHSRERSSERMQERVADRCLDKPLDKTKDDKGKPRH
TDVSADKSDERFHGQSLPPPPPLPLSFVPQSVGGNRRDEEADRKSGTSRHIQRLSPMHDD
KDRRHSEENVSQDDVKRRREDDFRERKREERDVISLKVDERDREKGNPLKDDVDPTAAKR
RKLKRDHISESSGDYSTVMSSPSSLALGIPQSFDARERNDRKGGLIQHRAAYAEEPLPRL
HGKEAAGKTTRRDVDQLLEREWEEEKRQRTEAKRKHRK
NT seq
5697 nt
NT seq
+upstream
nt +downstream
nt
atgacttccaagtgccccgagttcaaattcgtcacagaaggatgcctccaggaatggaag
gcctcgaacagcaatttcaagctcccggaaccggtctctatgatcaggttcctctacgag
ctctgctgggctatgattcgcggagaattacccttgcaaaagtgtaaattggcgctggac
tcggctacgttctcagatggaaagaaggaagagataggttccatgctggttgatatcatt
gctcacttggggcaagatctcacaatgcctgtagagtaccgcagccgccttacaaaaatg
gcaaaatggtttgctgaatcttcattggttccatctaggctcttacaagagcgttgtgag
gaagaatttttatgggaatctgaactgtctaaattaaaagctaatgagttgaagtctaaa
gaggtcagaataaacacgcgccttttgtatcaacaaacaaaatttaacctccttagggaa
gaaagcgagggctattccaagctggttactcttctttgtcaaaatggtgtagatgctgct
aaccagactacatcatttggtataatcagcataattaagtctttgattggacactttgat
ttggatccaaatcgtgtctttgacattgtcttggagtgttttgaactctaccatgacaac
aacatattttatagtctcattcctatctttcctaagtcacacgctgcccaaatattgggt
tttaagtttcagtactatcaaagaatcgaagttagctctccagttccttctgggctttat
cgtcttgctgcgttgttggtaaaatcagactttattgatcttgatagtatatgtgcccac
ttacttccgaaggatgaggaggcatttgagcattatgatgcactcatcgcaaagcggttt
gaagaagcaaacaaaattggtaaaataaatttagctgctactggaaaagatctcatggaa
gatgagaagcaagatgttacagtcgatttgtttaccgcactggacatggagagtgaagct
gttatggagcatgctgctgaggtcgaaaataaccagagttttggtcttctcattggtttt
ctttcaatagatgactggtatcatgctcaagttctctttgatcggctatcccatctgaac
cccgttgcacatattcttgtctgtgagggcttatttagggctatagagaagagcatcgcc
tcctcttatgatattgtttgtcataaacgtctccaaaacattggcaactcctttaccact
tgttcagataccacagagtcggtaattacatcatcaattccagttcctcaggttgatctt
tcgagggatctttttcaaatgcttgctgctgctggtccttacctacatcgtgataccatt
cttttgcagaaggtttgtcgagttttaagagcatactacctttcggctcaggaatctgct
agtgttgctggaaacctactttctcatgttactggggacgtaactagaaaacatcctggc
tttcaagccaaggaagccaggttgagggttgaggaggctctaggagcttgcttgctccca
tcgttgcagttaatacctgcaaatccagcagtggggcagggaatatgggaagttctttcc
ctacttccatatgaggcccgttatcgtctgtatggtgaatgggagaaggacgatgaatgc
attcctatggtccttgctgcaaggcagattgcaaagttggacactcgtagattattgaaa
cgacttgccaaggaaaacttaaagcaacttggtcgtatggtggccaagcttgctcatgct
aatccaatgactgttttacgaaccattgttcaccagattgaggcatacaaggatatgata
acacctgttgtagatgctttcaaatatttaacacagttagagtatgatattctagaatat
gttgtaattgaacgattggcacaaggtgggcgtgagaagctaaaagatgatgggcttaat
ttatcagactggcttcagtctcttgcatctttttggggtcacttgtgcaagaagtacccc
tcaatggagttgagagcatttcttcttttcttctacttgccggacagttgttctccaaat
gaggaacaaggtctttcagatttgaaaggctcagttggcatggtgatagtatgcttcagc
caaatgaggccttctagtatgcgctcaaataggcatgccgtgaaaagtagtggcgacaac
catgatagtgaaagtaaaaatttgcaggccacaaaattggatggtgatataatcatctct
agtattgccaatggcacgagcatctctagtatttgtaagatcgttggtgagctggatgtt
ggctccacatttaagttgttcagtgaaagattatttttctttatgttttattttctccta
atgcaggcactaagcaaatctactatgaggctgagagactcgttgcttccaaaggaagaa
cctaagttggctatacctcttttattacttatagcacaacaccgctccatggttgtaata
cacgctgatgctccctacattaaaatggttagcgagcaatttgaccgttgtcatggaaca
cttcttcagtatgtggaatttctcttaagtgctgttactccaacttcatcatatgctcag
ctaatcccctcactgaatgatcttgttcaccaataccacctcgaaccagaggtggctttt
ctaatataccgaccggtactgaggctcttcaaatgcaacagtcctgaagtcttttggccc
ctagatgcgatggaagaaactcttgtgacaattgaaggaaatgatgttgaacaatcttct
agtaacattgttttggatctgggtacttccaaaaatctaatcacgtgggtagatctcttg
gaaggagttagatcaatgctacctgttaaagcttggaatagcctctctcctgacctctac
gccacattttgggggcttactctttatgatctttatgttccaagaaatcgatatgaagca
gaaattgcgaagcaacatgctgctattaaagcattagaagagctctctgataattcaagc
atggctattacaaaacgtaagaaagataaggaacgaatccaagaattacttgatagactt
gccagtgagcttcagaagcatgaacaacatgttgcatctgtgcaccataggcttagacgg
gagaaggacaagtggttgagttcctgccctgacacattaaaaattaatatggaatttctt
cagcgatgtatttttccacgctgcatcttcagcatgcctgatgctgtgtattgtgctaaa
tttgtgcacatgctacattctcttggaacaccattcttcaacacggtcaatcatattgat
gttctcatttgtaagacattacagcccatgatcttctgctgcaccgagtatgaagctggc
agattgggaagattcttatatgagacacttaaaatggcatactattggaagagtgatgaa
tctatttatgaacgtgaatgtggaaacatgcctgggtttgctgtttattacagatatccc
aatagtcagcgtgtggcctacggccaatttgttcgagtgcattggaaatggagcggaagg
atgaccaggttactggcacaatgtttagagtccactgagtacatggaaattcgcaacgcc
cttattatcttgacaaaaatctctactgtatttcctgtgacaaggaaaagtggtgtcaat
cttgaaaaacgggtggttaaaattaagggtgatgaaagggaggacctcaaggtgttggct
actggtgtagctgcagctttggcagctcgtaagagctcatgggtttctgaagaagaattt
ggaatgggatatcttgatctgaagcctgcggcatcaccagctaagcctctgaccatcaac
ctgggtagcctacctaatggttctactcccagcgtatctcaaaatcaaaatgagatgatt
ggttcaaggaattcctcggctgttaatctacctgtagatcatacaggtagagagcagatg
atctctgctagatcagcagagggcagatcagaacgtcctgaaaattcagcccccatgaag
tctgatttggcacaacaaagatcaagggttatctcctcaactaatgggttacctagtcag
tctactttatcttcgtcccatcagtcaatcatgagttctaaggcccccggtaatttcaaa
aacacagaagagcttaatagagtattggcaatcgaacctgagtcaaaatctcagttcaaa
cgatctgcacagagctcggttgggaagcaaacaaaacaggaggttgctaaggaagatgct
aaatcaggaaaatcaattggtagagcagcaaatcaggcttctgctagttctgacagagat
tcagctcatccttctgagggtaggcagagtggaattgctatcactgctgctgctaacaac
ggtaactcaattcagccatcagggaaggtaccagcttctgcttcaagaactgacttacat
ggtagcctgctaaggacggaaactggggcatctaaaccatcggataataatacagaaatt
tctgaaaattcaaaaagcgtctctgtaagggctttacatgctcctctccctgatgactct
tcaagtaaacaacagaaaagaacaattacagttgaagaacaagataggattagtaagcgt
aggaagggtgattctgaaggaaaagatgactatgtttttgatgctcgattgctcgataaa
gctcatctgttagatcatgaaaggattaatactgatgaacaataccaaaacagatctaca
gaaaagctgttggaaaaactgaaagataagggctcggaaagattggacaaagagcataag
gagaggccggacagatctgatgtgaaccgtggtgaggacattcatgataaatcacgggat
aggtcaatggaaagacatagtagagagcgttccagtgaaagaatgcaagagagagtggca
gataggtgtcttgataaacctttagataaaacaaaggatgacaagggtaaacctcgacac
actgatgtctctgctgataaatctgatgagagatttcatggacaaagtttgccgcctcca
cccccactccctctcagttttgttcctcaatctgttggaggcaataggagagatgaggag
gcagatagaaagagtggtacaagcagacacattcaaaggctgtctcctatgcacgatgat
aaagataggaggcattctgaggagaatgtttctcaggatgatgtgaaacgtagacgagaa
gatgattttcgagagagaaaacgtgaagagcgagatgttatttctcttaaggtggatgaa
agggatcgagagaaagggaatcctttgaaggatgatgtggacccgacagcagcaaagcga
cggaaacttaaaagggaccatatatctgaatcaagcggggattattcaacggtcatgtca
tcaccttcctctttggcattgggaattcctcaatcatttgatgcaagggagagaaatgat
agaaaaggaggattgatacagcatcgagctgcctatgctgaggagccactacctaggttg
catgggaaggaagctgcaggcaagactactcgacgagatgttgatcaacttcttgagaga
gaatgggaggaagagaagcgacagagaactgaagcaaagagaaagcatcgcaagtag
DBGET
integrated database retrieval system
