Dendrobium catenatum: 110111119
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Entry
110111119 CDS
T05027
Name
(RefSeq) cell division cycle protein 48 homolog
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
dct
Dendrobium catenatum
Pathway
dct04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
dct00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
110111119
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dct03019
]
110111119
03009 Ribosome biogenesis [BR:
dct03009
]
110111119
04131 Membrane trafficking [BR:
dct04131
]
110111119
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
dct04147
]
110111119
Messenger RNA biogenesis [BR:
dct03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
110111119
Ribosome biogenesis [BR:
dct03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
110111119
Membrane trafficking [BR:
dct04131
]
SNARE
SNARE associated proteins
Others
110111119
Autophagy
Aggrephagy
Other aggrephagy associated proteins
110111119
Exosome [BR:
dct04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
110111119
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
AAA_2
AAA_16
CDC48_2
AAA_5
AAA_33
AAA_14
AAA_22
TIP49
NPHP3_N
AAA_17
RNA_helicase
nSTAND3
Mg_chelatase
AAA_28
nSTAND_NTPase5
AAA_18
ABC_tran
ATPase_2
Vps4_C
Parvo_NS1
Viral_helicase1
AAA_7
IstB_IS21
NB-ARC
NACHT
Zeta_toxin
TsaE
DUF815
Motif
Other DBs
NCBI-GeneID:
110111119
NCBI-ProteinID:
XP_020698516
LinkDB
All DBs
Position
Unknown
AA seq
807 aa
AA seq
DB search
MENKGSEPRGTKRDYSTAILEKKKAPNRLIVDETVNDDNSVVSLHPLTMEKLQMFRGDTI
LLKGKKRRDTICIALADDTCEEPKIRMNKVVRSNLRVKLGDVVSVHQCPDVKYGNRVHIL
PIDDSIEGVTGNLFDAYLKPYFMDAYRPVRKGDLFLVRGGMRSVEFKVIEIDPAEYCVVA
PDTEIYCEGEPIKREDENRLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPP
KGILLFGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAP
SIIFIDEIDSIAPKREKTHGEVERRIVSQLLTLMDGLKARAHVIVIGATNRPNSIDPALR
RFGRFDREIDIGVPDEVGRLEVLRIHTKNMKLAEDVDLERVSKDTHGYVGADLAALCTEA
ALQCIREKMDIIDLEDETIDAEILNSMAVTNEHFKTALGTSNPSALRETVVEVPNVSWDD
IGGLTTVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQAN
FISIKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRGSSVGDAGGAAD
RVLNQLLTEMDGMSARKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEASRHQIFK
ACLRKSPVAKDVDLMALAKYTQGFSGADITEICQRACKYAIRENIEKDIERERKPRENPE
AMEEDAVDEVAEIKAAHFEESMKFARRSVSDADIRKYQAFAQTLQQSRGFGSEFRFPQQS
EAGTTAAATDPFATSTAADDDDDDLYK
NT seq
2424 nt
NT seq
+upstream
nt +downstream
nt
atggaaaataagggatccgaacctagaggtactaagagggattacagcactgcaatcctc
gaaaagaaaaaggccccgaatcgtctgatcgttgacgagactgttaatgatgataattcc
gttgtctccctgcatccgctgacgatggaaaagctgcagatgtttagaggggataccatc
ctattgaaagggaaaaagcgaagagatacaatttgcattgcacttgctgatgatacttgt
gaagagcctaagattagaatgaataaggttgtgaggtccaaccttagggtgaagcttggc
gatgtggtttctgttcatcaatgcccggatgtcaaatatggaaatcgtgttcatatcttg
cctattgatgattccattgaaggtgttacagggaacttgtttgatgcttatttgaagcca
tatttcatggacgcgtatcgtcctgtaagaaaaggagatctatttcttgttagaggaggc
atgagaagcgttgaattcaaggttatagagattgatccagcagaatactgtgttgtagct
ccagacacagagatctactgtgaaggtgaacctataaagagagaggatgagaataggcta
gatgaagttggttatgatgatgtcggaggggtgagaaagcagatggctcagattagggag
ctagttgagcttccactcaggcatcctcaacttttcaaatccattggtgtgaagcctcca
aaagggattttactttttggacctcctggatctgggaaaacactcatagcaagggctgtt
gcaaatgagacgggagcttttttcttttgcataaatggcccagagatcatgtcaaagtta
gccggagaaagtgagagcaaccttaggaaagcttttgaagaagctgagaagaacgctcct
tccattatcttcattgatgagattgactccattgcaccaaaacgcgagaaaactcatggt
gaagttgaaagacgcattgtttctcaacttttgactctcatggatggtttgaaagctcga
gctcatgtgatagttataggagcaacaaatagaccaaatagcattgacccagctctcaga
aggtttggaaggtttgatagggaaatcgatattggtgtgcctgatgaggttggacgtctt
gaggttctccgcattcatacaaagaacatgaagctagctgaagatgttgacttggaaaga
gtttctaaagacactcatggttacgttggagctgatcttgctgctctttgcactgaagct
gcccttcaatgtattcgcgaaaaaatggatattattgacttagaagatgaaacaattgat
gctgagattttgaactccatggcagttacaaatgaacatttcaagactgctcttggaaca
agcaatccgtcagcacttcgggaaacagtggttgaagtgcctaatgtcagctgggatgat
attggtggtcttacaactgtaaagagggaattgcaagagactgtacaatatcctgtggag
catcctgagaagtttgaaaaattcggaatgtctccttcaaagggtgtattgttctatgga
cctcctggttgtgggaagactttgttggcaaaggcaattgctaatgaatgtcaagctaat
ttcatcagtattaaaggcccagaattgctcactatgtggtttggtgaaagtgaagcaaat
gtgagagaaatattcgataaggctcgccaatctgccccctgcgtcctcttctttgatgag
cttgattcaattgctacacagagaggcagcagtgttggagacgcaggaggtgcagctgat
agagttctcaaccagctcttgacagagatggatggcatgtctgccagaaaaactgttttt
attattggtgcaacaaacagacctgacatcatagatccagctttgcttcgtcccggccgg
ctcgaccaattaatttatattcctttgcctgatgaagcttctcgtcaccaaatattcaaa
gcttgtcttaggaagtctcctgttgcaaaagatgtcgacttgatggctctagccaagtac
actcagggtttcagtggagctgatataacagaaatctgccagagagcctgcaagtatgcc
atcagagaaaacattgaaaaggatattgaaagggagaggaaaccacgagagaaccctgag
gcaatggaggaagatgctgtagatgaagttgcagagatcaaagcagcccattttgaggaa
tcaatgaagtttgctcgaaggagcgtcagtgatgccgatattcgcaagtaccaggctttt
gcacagactttgcagcaatcgaggggtttcggtagcgagtttcgcttccctcagcagtct
gaggctggaaccacagctgctgctacagatccatttgcaacatcaacagctgcagatgat
gatgatgatgatctatacaaataa
DBGET
integrated database retrieval system
