Dendrobium catenatum: 110111236 Help Entry 110111236         CDS       T05027                                  Name (RefSeq) vacuolar sorting protein 39   KO K20183   Vam6/Vps39-like protein vacuolar protein sorting-associated protein 39 Organism dct  Dendrobium catenatum Pathway dct04148   Efferocytosis Brite KEGG Orthology (KO) [BR:dct00001]  09140 Cellular Processes   09141 Transport and catabolism    04148 Efferocytosis     110111236  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:dct04131]     110111236 Membrane trafficking [BR:dct04131]  Endosome - Lysosome transport   Tethering complex    Hops complex     110111236 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Vps39_1 CNH zf-Vps39_C Clathrin zf-HC5HC2H TPR_Vps41 zf-HC5HC2H_2 Motif Other DBs NCBI-GeneID:  110111236 NCBI-ProteinID:  XP_028554318 LinkDB All DBs Position Unknown AA seq 1001 aa AA seqDB search MVHSAYDLVELVKGCNAKVESLATYGSKILLGCSDGSLRIFVPTSALSIASSPSSGDEGL QPSDSDIKREPYALERAMSGFWKRAPLAMEVCRSRDLLLSLSEWIAFHRLPNLETVVAIA KTKGANVYSWDDRRGFLCVGRQKRVGIYRLDGGREFVEVKEFGVSDQVKSMAWCGENICL GIGKEYIILNSTTGASSKVFSSGRSIPLVVPLPSGELILGKDDVGVFVDQNGKLLQDGRI CWSEAPSSIVIHKPYGLARLPRHVEIRSLDAPYPLVQTIVLRDVHLLQQSNNCAIAAVGS SIYGLLPVPVGAQIVQLTASGNFVGALALCKLLPPEDSSLRAAKEASIHIRYGHYLFDNG SYEESMDQFLASQVDITYVLSLYPSITLPKDLTIVEPEKFQEQTDAFYLSRFSSDVSDDM ESSLPSQFYESDDKSAVEDKKTSYNAIMALAKYLQRKRFSVIERATAEVTEEVVSDAVQG SITTSEPYGSMSSSKKRGHPHISSVGRELATILDTALIQALLLTGQFLVAVDLVKGPNYC DLKICEEILKGRNDYEVLLELYKYNGMHHEALKLLHQLIEESNSSITSSESQNFKPSMII NYLKPLCTTDPMLVLEYSTLVLEKCPTETMELFLWGNVPADLVNSYLKKHAPNLQSTYLE LMLSMSGNGINTNLQSELVQIYLSEVIDWYKDLKEKHNWDEKIYSSTRTKLLSLLDSMPS YNTDALLKRLPSDALYEERAVLLGKINQHQLALSLYIHKLYLPDQALTYCDRVYEMGPQQ PSKFNSNIYLTLLQIYLNPQRSIKEFEQKTYPVPLQKSSFQKITKGKGGRVTKKIAEIEG AEDMRISPSSTDSGRSDVDGEEANEEGGPIMLNEALDLLSQRWDKINGAQALKLLPRDTK LQNLRSFLEPLLRKSSEGRRNYCVIKSLRYSENLQVKEELYKHRRTVVKIDGDSTCALCH KKIGTSVFAVYPNGKTLVHFVCFRDSQTIKTVRGSGTPKLK NT seq 3006 nt NT seq  +upstreamnt  +downstreamnt atggtgcatagcgcctacgacctggtggagctcgtaaagggctgcaacgctaaggtcgag agcttggcaacatacggttctaagatcctcttaggttgctctgatggttcgcttcgaatc tttgtaccgacttccgctctttcgatcgcttcttcccccagcagcggggatgaggggctt cagccgtctgattccgatatcaaacgggagccatacgcgctagagagggcgatgtcgggg ttctggaagcgtgcgccgttggcgatggaggtgtgccgctcacgcgaccttctgttgtcc ctctcggagtggatcgcattccaccggcttcccaacctggagacagttgtcgccatagcc aagacgaagggcgctaatgtctacagctgggacgatcggaggggattcctctgcgttggt aggcagaaaagggtcgggatctatagactggatggtggtcgtgaatttgtggaggttaag gagtttggtgtatccgatcaggtgaagtctatggcatggtgtggtgaaaacatttgcttg gggattgggaaggaatacataatactgaacagtacgactggagcatcgtcaaaagtattc tcttctggaaggagcattcccttagttgttcctcttccctctggggagcttatcttagga aaggatgacgttggagtttttgttgaccaaaatgggaaacttctacaagatggcaggata tgttggtctgaggcccccagctctattgtcatccacaagccatatggattagctcgccta cctaggcatgttgagatacgctctcttgatgctccgtatcctttggttcagacaattgtt ctcagggatgttcatctccttcaacaaagtaataactgtgcgattgctgcagtaggaagt tcaatttatggtctcttgcctgttcctgttggtgcccagattgtacagttgacagcatct gggaatttcgtgggggcattagctttgtgtaagctactcccaccagaggattctagcctt cgagcagcaaaagaagcctctatacatataaggtatgggcattatctgtttgataatggg agctatgaggagtccatggatcagttcttggcttcccaagtggatataacctatgtatta tctttatatccttcaataactctaccaaaggatctaactattgttgaacctgagaagttt caagaacagactgatgctttttacctatcaaggttttcttctgatgtgtcagatgacatg gaatcatcattgccatctcaattctatgaatctgatgataaatcagcagttgaggataag aaaacgagttacaacgctatcatggcactagcaaagtacctgcagaggaaaagatttagt gtaattgaaagggcaactgcagaggtaacagaggaagttgtctctgatgctgtgcaaggc agcataacgacttctgagccatatggatctatgagttccagcaagaaaagaggtcaccct catatcagttcagttggaagggagttggcaactatactggacactgcacttattcaggct ctgcttcttactgggcaatttttggtagcagtagacttggtgaaaggtcctaactactgt gatttaaagatttgtgaagaaattttgaaaggtaggaatgattatgaagtcttgttagag ctgtataagtacaatggaatgcatcatgaagcactgaaactcctccatcagcttattgag gaatcaaattcaagcattacgagttctgaatctcagaatttcaaaccatccatgattatt aattatctcaagcctctttgtacaaccgacccaatgcttgttttggaatactctacactt gtcctagaaaaatgtccaacggagactatggagctttttctctggggaaatgttcctgct gatttggtcaattcatacttaaagaagcacgcaccgaacctgcaatctacctacttggag cttatgctttcaatgagtggaaatggcatcaacacaaacctgcagagtgaactggttcaa atatacctttcagaagtcatagactggtacaaggatctgaaagagaagcataactgggac gagaagatctactcatccacacggacaaagttgttgtcattgttagatagcatgccttct tataacacagacgctcttttgaaacgccttccatctgatgctctctatgaggagcgtgcc gttttacttggcaagatcaatcaacaccagcttgctttgtctctatatattcataagctt tacttacctgaccaggcactcacatactgtgatcgtgtctatgagatgggaccgcaacag ccttcaaagtttaattccaacatatatcttactctgctgcaaatttaccttaatccacag aggtcaatcaaagaattcgagcaaaaaacttacccagtacctctacaaaaatctagcttt caaaaaataactaaaggtaaagggggccgagttacaaaaaagattgctgaaattgaggga gccgaagatatgcgcataagcccaagcagtactgatagtggacgtagtgatgtggatggg gaagaagcaaatgaagaaggtggtcctataatgttgaacgaggcattggatttgttgagc cagagatgggacaagatcaatggtgctcaggcccttaagttattaccgagagacacaaag cttcagaatttgcgttctttccttgagcctctcttaaggaagtctagtgaaggccgccga aactactgtgttatcaagagtttgagatacagtgagaatttacaggtaaaagaggagcta tataagcatcgccgcacagtggtaaaaattgatggtgatagtacatgtgcgctttgccac aagaaaataggtactagtgtttttgccgtttacccaaacggaaagactcttgtgcatttt gtttgctttagagattcgcaaactatcaaaactgtgagaggatcaggtacgccaaagctt aaatag

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