Dendrobium catenatum: 110111363
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Entry
110111363 CDS
T05027
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 36a
KO
K14563
rRNA 2'-O-methyltransferase fibrillarin [EC:2.1.1.-]
Organism
dct
Dendrobium catenatum
Pathway
dct03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
dct00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
110111363
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
dct03009
]
110111363
Ribosome biogenesis [BR:
dct03009
]
Eukaryotic type
Sno RNPs
Box C/D snoRNPs
110111363
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fibrillarin
GCD14
Methyltransf_31
Methyltr_RsmB-F
PCMT
Motif
Other DBs
NCBI-GeneID:
110111363
NCBI-ProteinID:
XP_020698861
LinkDB
All DBs
Position
Unknown
AA seq
304 aa
AA seq
DB search
MRPPRGGGFRGRSDGGGGRGRGRGGGGRGEGRGGSRGRGFGGGRGAGRGGMRGRGGRGGM
KGGSKVVVQPHRHDGVFVAKGKEDALCTKNMVSGESVYGEKRISVQNEDGTKVEYRVWNP
FRSKLAAAILGGVDNIWIAPGSRVLYLGAASGTTVSHVSDIVGPTGMVYAVEFSNRSGRD
LVNMAKKRTNVIPIIEDARHPTKYRMLVGMVDVIFSDVAQPDQARILGLNASFFLKNGGH
FVISIKANCIDSTVPAEAVFAQEVKKLQADQFKPFEQVTLEPFERDHACVVGAYRVPKKK
KLDS
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atgagacctccaagaggcggtggattcaggggacggagtgatggcggcggcggtaggggc
cgaggaagaggaggtggaggtagaggagaaggaagaggaggaagcaggggccgtggcttc
ggtggtgggcgaggagccggccgaggaggtatgagggggagaggaggccgtggagggatg
aagggcggaagtaaggtcgtggtgcagccccaccgacatgatggtgttttcgttgcaaag
ggaaaagaagacgccctctgcacaaagaatatggtttccggtgaatccgtgtacggcgag
aagcgtatttctgttcagaatgaggatggaaccaaggtggaatatagggtgtggaatcca
tttaggtcaaagctggcagcagcgattcttggtggtgttgataatatttggattgctcct
ggctctcgggtactttaccttggggctgcatcagggactacagtatcacatgtttctgat
attgttgggccgactggaatggtctatgctgttgaattttcaaataggagtggtagggac
ctagtaaacatggcaaagaagcgcaccaatgttattccaataattgaggatgcaagacat
cctactaaatatcgcatgttagttggaatggtggatgttattttctctgatgttgctcag
ccggatcaggcaagaattttaggtttgaatgcttcattttttctcaaaaatggtggccat
tttgtcatctcaatcaaggcgaactgtattgactccacagtgcctgctgaggcagtgttc
gcccaggaagtaaagaaactgcaggctgatcaattcaagccctttgaacaggttactctt
gaaccttttgaacgtgaccatgcctgcgttgttggtgcttacagagtgccaaagaagaag
aagctagactcttaa
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