Dendrobium catenatum: 110111410
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Entry
110111410 CDS
T05027
Name
(RefSeq) vacuolar sorting protein 18 isoform X1
KO
K20181
vacuolar protein sorting-associated protein 18
Organism
dct
Dendrobium catenatum
Pathway
dct04142
Lysosome biogenesis
dct04145
Phagocytosis
dct04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
dct00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
110111410
04142 Lysosome biogenesis
110111410
04148 Efferocytosis
110111410
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dct04131
]
110111410
Membrane trafficking [BR:
dct04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
110111410
Hops complex
110111410
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pep3_Vps18
VPS18_solenoid_2nd
VPS18_solenoid_1st
VPS18_RING_C
Clathrin
zf-RING_11
zf_RING_Vps8
zf-RING_UBOX
RPN1_RPN2_N
zf-C3HC4_2
zf-C3HC4
zf_RING_Vps8_fungal
zf-rbx1
Beta-prop_VPS8
zf-RING_Vps41
TXNDC16_2nd
Nup54_57_C
zf-RING_2
Lipid_bd
Motif
Other DBs
NCBI-GeneID:
110111410
NCBI-ProteinID:
XP_020698933
LinkDB
All DBs
Position
Unknown
AA seq
991 aa
AA seq
DB search
MNAGGHVFSVDLLERNGAKGHGFITCMAAGNDVILIGTSKGWLIRHDFGVGDSYDVDLSG
GRGGEQPVHRVFVDPGGSHCIANVLHSGGTETYYTHAKWARPRVLSRLKGLVVNAVAWNR
QQITESSTREVILGTENGQMYEMSVDEVDKKEKYIKFLFELTELPEAIMGLQMETASVGN
AMRYYVMAVTPTRLYSFTGIGALDTVFASYSDRAVHFMELPGEIPNSELHFFIMQRRAKH
FAWLSGAGIYHGELNFGAQHSSSGGDENFVENKGLLNYEKLGEAMKPRSLAVSEYHFLLL
IGEKVKVVNRISQQIVEELKFDHAPDSVSKGIIGLCSDATAGLFYAYDDSSVFQVSTLDE
GRDMWKVYLDTKEYAAALASCRSPLQRDQVYLMQADDAFSSKEYFRAASFYAKVNYILSF
EEISLKFINISEQDALRTYLLRKLDNLTRDDKCQITMISTWITELYLDKINRLLLEDDPI
SLGNAPLGSSNAEYQSIIKEFRAFLSDSKDVLDEATTMKLLESYGRVEELVFFASLKEQY
EIVIHHYIQQGETKKALEVLRRPNVHVDLQYKFAPDLIMLDAYETVESWMTTNKLNPRKL
IPAMMRYTSEPHAKNETHEVIKYLEYSVHHLHNEDPGIHNLLLSLYAKQEDDSALLRFLQ
CKFGKGQVDGPEFFYDPKYALRLCLKEKRMRACVHIYSMMSMHEEAVALALQVDPELAMA
EADKVEDDEDLRKKLWLMVAKHVIQLEKGIKRENIRKAIAFLKETDGLLKIEDILPFFPD
FALIDDFKEAICSSLADYNKQIELLKQEMNDATRGADNIRSDITALAQRYAVVERDEECG
VCKRKILSTGGAHQMRRGYLPVGPMTPFYVFPCGHSFHAQCLITHVTQCSSQSQAEQILE
LQKQISLLDGKVTKDAGTSTSGDSIASTISANNLRSQLDEAVASECPFCGELMIRDISKP
FILPEESELVASWQIKPQVVTQKILPMSMSI
NT seq
2976 nt
NT seq
+upstream
nt +downstream
nt
atgaacgccggcggtcacgtcttttctgtcgacctgctcgagcggaatggcgccaaaggc
cacggctttatcacctgcatggccgccggcaatgacgtcatccttatcggcactagtaag
gggtggcttatcaggcacgacttcggcgttggagattcttacgatgtggacttatccggc
ggccgtggtggcgaacagcctgttcaccgcgtcttcgttgaccctggcggcagccattgc
attgctaatgttcttcacagcggcggcacggagacttattatacgcacgcgaagtgggct
aggcctagggttttaagtcggctgaagggcctggtagtgaatgcagttgcttggaatcgg
cagcagatcactgagtcttcaactcgtgaagtgattcttggaaccgagaacgggcaaatg
tatgagatgtcagttgatgaagtggacaagaaggagaagtatataaagtttctatttgag
ctaactgagcttcctgaagctatcatgggcttgcagatggaaactgcctccgttggcaat
gctatgagatattatgtcatggccgtcacaccaacacgtttgtactcgttcacgggcatt
ggagcattagatacagtgtttgctagctactcagatcgtgcagtgcactttatggagctt
cctggagaaatcccaaatagtgaactgcatttctttatcatgcagagaagggccaaacat
tttgcttggctttctggtgctggaatctatcacggtgaactgaactttggtgcccagcat
agttcaagtggaggagatgagaattttgtggaaaacaagggtctactaaactatgaaaaa
ctgggggaagcaatgaagccgaggtctttagcagtgtctgaatatcattttcttcttctt
attggagaaaaggtcaaggttgttaacagaattagtcaacaaattgttgaggaactgaaa
tttgaccacgcaccagattcggtttcaaaaggcataattggtttatgcagtgatgccact
gctggactgttctatgcatatgatgatagttctgtattccaggtgtctactctagatgaa
ggccgagacatgtggaaagtttacttagacacgaaggaatatgcagctgccttagccagt
tgtcggtctccattacagagagatcaagtatatttaatgcaggctgatgatgctttttct
tcaaaagaatactttagagctgcatccttctatgccaaggtgaactatattttgtcattt
gaagaaatcagcctaaagtttatcaacatttcggagcaggatgctctgaggacttatctt
ctaagaaagcttgataatctcactagagatgataagtgtcaaatcacaatgatttcaaca
tggattaccgagctgtacttggacaagattaatcgactgctattagaagatgacccaatt
tcacttgggaatgcaccattaggaagcagcaatgcagagtatcagtcaattatcaaagaa
tttagggccttccttagtgattccaaggacgtgttagatgaggcaaccactatgaagctt
ttggagagttatggtagagttgaggagctagtcttctttgcttctctgaaggagcagtat
gaaatcgtaattcatcattacattcagcaaggggaaacaaagaaagcacttgaggtactt
cggagacctaacgtgcatgttgatcttcagtacaaatttgcccctgatctaatcatgctt
gatgcctacgagactgttgaatcatggatgactacaaacaagctgaatccaaggaagtta
atacctgcaatgatgcgatacacaagtgaaccacatgccaaaaatgaaacacatgaggtg
atcaagtatttggaatactctgtccatcatttgcataatgaagatcctggaatccacaac
ttactgctttccttgtatgcaaaacaggaagatgacagtgcacttttgcgatttttgcaa
tgcaagtttggcaaggggcaagttgatgggcctgagtttttctacgatcccaagtatgca
ttacgtctatgcctaaaggaaaaaaggatgcgtgcttgtgttcatatctatagtatgatg
tccatgcatgaagaagctgtagctcttgctttgcaggtagacccagagctcgcaatggct
gaagcagataaagttgaggatgatgaggatctgaggaagaagctatggcttatggtggct
aagcatgtgattcagttggaaaaaggaatcaagagggagaatataagaaaggcaattgca
tttctgaaggaaacagatgggcttctgaagattgaggatattcttccatttttcccagac
ttcgcacttattgatgattttaaagaagcaatttgctcgtcactggcggactacaacaaa
cagattgagttactaaaacaggaaatgaatgatgctacacgtggtgctgataacataagg
agtgatatcaccgcccttgctcaaagatatgctgttgttgaacgtgatgaagaatgtgga
gtttgtaaacgtaaaatattatccactggaggggctcatcagatgagaagaggttatctg
ccagttggaccaatgactcctttttatgttttcccttgtggacattcgttccatgcacaa
tgcctgataactcatgtcacccagtgttcttctcaaagtcaagcagaacaaatactggaa
cttcagaagcagatcagtctgcttgatgggaaggtaacgaaggatgcaggcactagtacc
agtggagattctattgcaagcacaatatctgccaacaatttgcggtcgcaattggatgag
gctgtagctagtgagtgccccttttgtggtgaattaatgatcagagatatctccaaaccg
ttcatcttgcctgaagagtcagagctggttgcttcttggcagattaagccccaggttgtc
actcagaaaattctgccaatgtcgatgtcaatatga
DBGET
integrated database retrieval system
