Dendrobium catenatum: 110111432
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Entry
110111432 CDS
T05027
Name
(RefSeq) LOW QUALITY PROTEIN: adagio-like protein 1
KO
K12115
clock-associated PAS protein ZTL
Organism
dct
Dendrobium catenatum
Pathway
dct04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
dct00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
110111432
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
dct04121
]
110111432
Ubiquitin system [BR:
dct04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
SCF complex
Target recognizing subunit (F-box)
110111432
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Kelch_4
Kelch_3
Kelch_2
Kelch_5
Kelch_1
Kelch_6
PAS_9
F-box-like
PAS
F-box
PAS_3
PAS_8
Motif
Other DBs
NCBI-GeneID:
110111432
NCBI-ProteinID:
XP_020698981
LinkDB
All DBs
Position
Unknown
AA seq
619 aa
AA seq
DB search
MMEQGGDREVSMSAGEELEEDEEEEESFLLSGGIEVPSGLELGMGCGFVVTDALEPDHPI
IYVNHWFEEITGYCAEEVLGRNCRFLQCRGPFVQRRHPLVDSTVVSEIRRCIEEGTKFKG
ELLNFKKDGSPMISRLQLIPMYADGETVTHFIGIQIFSDTNVDVGPFSNTRAKDLAGYSE
RFKSGLSLYRPISAAYRHICREVCSFLQLNDEVLCQQIFLRLDPRDIASVGSVCKRLHHL
TKNEELWRMVCLNAWGSETTNAIESVPAAKRLGWGRLVRELTTLEAVAWRKFTVGGAVEP
SRCNFSACAVGSRVVLFGGEGVNMQPMNDTFVLDLNSSNPQWRPVNVSSPPPGRWGHTIS
SLNGSWLVVFGGCGTQGLLNDVFVLDLDSQHPTWREVAGLAPPLPRSWHSSCILDGTKLV
VSGGCADXGVLLSDTYLLDLSAEKPVWKEIPVRWTPPSRLGQSLSTYDGHKILMFGGLAK
SGALRFRSNDVFTLDLREEEPCWRCVTGGGMPGTGNPAGIGPPPRLDHVAVSLPGGRILI
FGGSVAGLHSASQIYLLDPTEEKPTWRILNVPGRPPRFAWGHSTCVVGGTRVLVLGGQTG
EEWILSELHELSLTSFIQV
NT seq
1860 nt
NT seq
+upstream
nt +downstream
nt
atgatggagcaaggcggagatcgggaggtctcgatgagcgccggcgaggagttggaggaa
gacgaggaggaggaggaaagttttctgttgagtggaggcatcgaggtgccgagcggcttg
gagctgggaatgggttgcgggtttgtggtcactgacgcgcttgagcctgaccatcccatc
atatacgtgaaccactggttcgaggaaatcacaggctactgcgccgaggaggttcttggt
aggaattgccgctttttacagtgcagaggaccatttgttcaaaggaggcatcctttggtg
gactccacagttgtctctgaaatacgaagatgcattgaggaaggaaccaagttcaaaggc
gagcttttgaatttcaagaaagatgggtcacccatgataagcaggctgcagctcattcct
atgtacgcagatggtgagacagttacccattttattggcatccaaatcttctccgacaca
aacgttgacgtaggaccattctctaacacccgggcaaaggacttggctggatattctgaa
cgttttaagtcaggcctcagtttgtaccgaccaatttcagcagcttatagacatatttgc
agagaagtttgcagctttttgcaattgaacgatgaggtcttgtgtcagcagatctttcta
aggttggacccaagagacattgcatctgttggctctgtatgcaaaagactccaccacctg
acaaagaatgaggagctctggaggatggtctgcctgaatgcttggggcagtgaaaccaca
aatgcaatagaaagtgttcctgcagcaaaaaggttaggttggggtaggcttgtgagggaa
ttaaccactcttgaagctgtcgcctggagaaaatttaccgttggcggtgctgtggaacct
tctcgctgcaacttcagtgcttgtgccgttggaagccgggttgtcctttttggcggtgaa
ggcgtgaacatgcagccaatgaacgataccttcgttttggatctcaactcgagtaaccca
cagtggaggcctgtaaatgtcagctcccccccaccaggtcgctggggccatacaatatct
tccttgaacggatcttggttagttgtatttggtggctgtggcacgcagggattgctcaat
gatgtttttgtattggatttggattctcagcacccgacatggcgcgaagtggcaggtctt
gctcctcccttaccgcgttcatggcacagctcctgcatccttgatggaacaaagctggtt
gtttcaggaggctgtgcagatntcggtgtgcttctcagcgacacctatctccttgacctt
tctgcagagaaaccggtatggaaagagataccggtgcggtggacgccgccttcaaggctt
ggtcagtcattatcgacgtacgacggtcataaaatattaatgtttggaggtttagctaaa
agcggagctcttcgttttcgttccaatgatgtattcacattggatctgagagaagaagag
ccatgctggagatgcgttactggaggtggaatgcctggtacaggaaaccccgccggaatt
ggtccgccgcctcgccttgatcatgtggctgtaagccttcctggtggtaggattcttata
tttgggggttctgtggctggtctccactcggcttctcaaatatatcttttggatccaaca
gaagagaaaccaacgtggaggatattaaatgttcctggcagacctccaaggtttgcttgg
gggcacagtacatgtgttgttggaggaacaagagttttagttcttgggggtcaaactggg
gaagagtggatattgagcgaactccatgaattatctcttacaagcttcattcaggtatga
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