Dendrobium catenatum: 110111557
Help
Entry
110111557 CDS
T05027
Name
(RefSeq) probable polygalacturonase At1g80170
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
dct
Dendrobium catenatum
Pathway
dct00040
Pentose and glucuronate interconversions
dct01100
Metabolic pathways
Module
dct_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
dct00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
110111557
Enzymes [BR:
dct01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
110111557
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
NosD
Motif
Other DBs
NCBI-GeneID:
110111557
NCBI-ProteinID:
XP_020699139
LinkDB
All DBs
Position
Unknown
AA seq
435 aa
AA seq
DB search
MVCTIPRAETPIRPPSLFRTDQAEASPIPLFARPQPGRPPIAYKEFVLIIFLYLMVAIIA
GASPIYNVMAYGARGDGKTDDTKAFLNAWKAACADPRNPYFVVTGKGGKNYLLSKIIFEG
PCSSSLKFLISGGLVAPNRLWTNQIDTWIIFKNIPKITVLGNGLIDGKGSIWWDCLSKNQ
CRDAPYIMEFMGCDYLRVKNLNLKDSPGKHLVVYKSDYVTLSGLKITSPEDSPNTDGILI
SDSQHGTISYSTIGVGDDCIAIGPRSYDINVSHITCGPGHGISIGSLGKNGVEDNVEGIH
ISNSHIFNTLTGIRIKTWQGGAGHAKSISYENINFTSVKAGVIVIDQYYCPELNCPNKTG
NVAISEVSYLGLQGSSVSDVAIKLACSSSMPCRDITMSEVSFTPQQANIRLQSYCINAQG
SASGHVTPQTPCLQH
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atggtttgcacgataccgagagctgaaacccctatccggcctccctctctgtttcgcaca
gaccaagccgaagcctccccaatccctctgttcgcgcgaccccagccaggccggcctccc
attgcttacaaggaatttgtattaatcatatttttatatttgatggttgcgattattgct
ggagcttccccaatttataatgtgatggcatacggagcaagaggagatggcaaaacagat
gacactaaggcttttttgaatgcgtggaaagctgcctgtgcagatcctagaaatccatat
tttgttgtgacaggcaaaggaggaaagaactatttgctaagcaaaataatatttgaaggg
ccgtgtagttctagcttgaaatttttgatcagtggaggtcttgtggccccaaacagattg
tggacaaatcaaatcgatacgtggatcatattcaaaaacataccaaaaataactgttctc
ggtaatggtttaatagatggcaaaggctccatatggtgggattgcttgtccaaaaatcaa
tgcagggatgcaccatatataatggagtttatgggatgtgattatcttagagtgaagaat
cttaacctaaaggacagccctggaaagcatttagtggtgtacaaaagcgattatgtaacg
ctgagcggtctcaaaatcacttctcctgaggactcgccaaatactgatggaattcttatc
tctgattcccagcatggcaccatctcatactccacaattggagtaggagatgactgcatc
gcaatcgggccacgtagctatgatattaatgtgagccatattacttgcgggcctggtcat
ggaataagcattggaagccttggaaaaaatggcgttgaagacaatgttgagggaattcat
atctccaacagccacatttttaacacccttactggtataaggattaagacatggcagggt
ggggctggtcatgccaagtctatctcctatgagaacatcaacttcacttcagttaaagca
ggtgtcatagtcatcgatcagtactactgccccgaactaaactgtccaaataagacggga
aatgtggcgataagcgaggtatcgtatctgggtttgcaaggaagctcagtcagtgatgtg
gcaatcaaactggcttgcagctcgagcatgccctgccgcgacatcaccatgagtgaagtg
agctttactcctcagcaagccaatattcgtctgcaatcttattgcatcaatgcacaagga
agtgcaagcgggcatgtcactcctcaaactccctgcctgcaacattag
DBGET
integrated database retrieval system
