Dendrobium catenatum: 110111562
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Entry
110111562 CDS
T05027
Name
(RefSeq) nuclear pore complex protein NUP155
KO
K14312
nuclear pore complex protein Nup155
Organism
dct
Dendrobium catenatum
Pathway
dct03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
dct00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
110111562
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dct03019
]
110111562
Messenger RNA biogenesis [BR:
dct03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
110111562
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nucleoporin_C
Nucleoporin_N
Arb2
Motif
Other DBs
NCBI-GeneID:
110111562
NCBI-ProteinID:
XP_020699144
LinkDB
All DBs
Position
Unknown
AA seq
1462 aa
AA seq
DB search
MTWEDEIIGTDVASAGLHISECIGRDAASQLDLEEALEASRYTSHPYSSQPKEWPPVAEV
LDTRELPAVLIERYNASGGEGTALCGIFPEIRRAWASVDNSLFLWRFDKRDGQCTEYSGE
EQSICAAGLARVKPGIFIEAIQYILVVATPVELLLIGVCCAVSADGTDPYAEISLQPLPE
YTIPSDGVTMTCFACMYNGQIYVSGRDGHIYEIQYTSGSGWRKPCRKVCLTAGFGTLVSK
WILPNALKFGAVDPIVDMVIDSERHVLYARTEAMKLQVFDLGVGGSSPFKKMAEERNLID
PRDLQYRGRRAGSRSIAQAKPSIVSIAPVSTMESKWLQMVAVLSDGRRLYVSTSPSSVNN
ASVSLTGLGNARPSCLKVVATRPSPPLGVGGGLTFGAISAANRVQPEDMALKVETAFYSA
GMFVLSDSSAPAVSSLLIVNRDTTTQLSHPRNSRAFRELVSSLPVEGRMLCVTDVLPLPD
TAATVHSLYSDLDAFGGLRESCEKASVRLWARGDLATQHILPRRKIIVFSTMGLMEIVFN
RPVDILRRLFESNAPRLQIEEFFNRFGSGEAAAMCLMLAAKLISDEENIISNSVSERAAE
TFEDPVIVGMPQLESNAVLSSVRAPAGGFSMGQVVPEAEPLFSGAHEGLCLCASRLLFPV
WELPVMTFRREIGSDGRFEEGVICCRLPSSAMQVLESKIRSLEQFLRSRRNKRRGLYGSV
ACRGDFTGSILYGTRSDVGANSQNEARNLFGLSSPSTVSGDAAFNKRQRLLHTSAELAAI
EVRAMECLRRLLRRSSEALFLLQIVYHHHVTRLVQALEGNVRQKLVHLTFNQLVCSDEGD
QLAMQLISGLMEYYTGTDGRGTVDEISAKLREGCPSYFNESDYKYFLAVECLERAFMTSN
AEERENLARAAFNHLTKVPESVDLRAVCKRFEDLRFYEAVVRLPLQKAQALDPDRRDNSL
VQREQCYETVMNALRSLKGDVGNVSRSGNILDQASRDKYIRQIIQLSVQWPDTAFHEHLY
RTLIELGLENELLEYGGSDLVSFLQSAGRKLQQEVQAVAASTPITTTRELETPIPSSQTK
YLDLLARYYVMKRQHLLAAHVLYRLAERQCTDAADAPTLDQRRQYLSNAVLQAKSAISIN
GSLSSTMSTMDNGLLDMLEAKLAVLRFQMKVKEELESIAFKLEGLQVTNESHPNDPFPRG
NLVFDANTAKIARDKAKELELNLKSITQLYNDYAVPFQLWEICLEMLNFANYSGDADSKI
VRETWARLVDQALSRGGIAEACAVLKRVGSNLYPVDGSFIPLDALCLHLEKAALERLSSG
IEVVGDEEIARGLLAACRGRPEAILSVYDQLLSNGAIVPSQNLRLRLLRSVLVVLREWVM
LVLANKLGTTTTGASYMFGGASALEQTSILQKGIRDKIASATNRYMTEVRRLALPQSQIE
PIYQGFKELEEKLLTPSSFQPY
NT seq
4389 nt
NT seq
+upstream
nt +downstream
nt
atgacgtgggaggacgagatcattggaaccgacgttgcttcggctgggcttcacattagc
gagtgtatcggtcgggatgccgccagtcagctagacctggaggaggcactggaggcttct
cggtataccagtcacccttactcttcccagcctaaagagtggcctcctgtcgctgaagta
ttggataccagggagttgcccgctgtgctgattgaaaggtacaatgcatctggcggtgaa
ggaacagctttgtgcggaatttttccagagatacgccgagcctgggcttcagttgataat
tccttatttctttggcgctttgataaacgggatggacagtgtacagaatacagtggagag
gaacaatcgatttgtgctgctggtcttgccagggtgaagcctggtatatttattgaagca
attcagtatattttggtggtggcaactccagttgagttgcttcttattggagtgtgctgt
gctgttagtgcggatggtacagatccatatgctgaaatttctttgcaaccattacctgag
tataccataccctcagatggtgtcactatgacatgttttgcatgcatgtataatggccag
atttacgtctctggtcgtgatggacatatttatgagattcaatacacatctggctcagga
tggcgtaagccttgtcgtaaggtctgcctgacagctggttttggcactcttgtttctaaa
tggattttgccaaatgctcttaagtttggagccgtggatccaattgtagatatggttatt
gacagtgaaagacatgttctttatgcaaggacagaggccatgaagctacaggtctttgat
ttaggagttggtggtagtagcccatttaaaaaaatggctgaagagagaaatttaatcgat
ccacgggatttacaatatagaggtagacgggctggatctagatcaattgctcaggctaag
ccatcaatagtttctattgcaccagtatccactatggaatcaaaatggctgcaaatggta
gccgttttatcggatgggagaaggctatatgtttccacttcgccatccagtgtgaataat
gcctctgttagtttaactggacttggtaatgctcgaccatcatgtttaaaggttgtagca
acaagaccgtcaccgcctttgggggttggtggtgggcttacctttggtgccatatctgct
gccaatagagttcaacccgaggatatggctttgaaggttgaaacagctttttattctgct
ggcatgtttgttctttcagattcatctgctccagctgtatcctctcttctgattgtgaat
cgtgataccaccactcagttatcgcacccgagaaattctcgtgcatttcgtgagctagtt
tcgtccttgccagtggagggtcgaatgctgtgtgttactgatgttctacctttaccggat
actgcagctacagtgcattcattatactctgatttggatgcttttggtggattgagagaa
tcatgcgagaaggcttctgtgagattatgggcacgaggagaccttgcaacccaacacatt
ctaccaaggagaaaaatcattgtttttagtaccatgggtttgatggagattgtttttaac
aggcctgtggacattttgagaagactttttgagtccaatgcaccaagattgcaaattgaa
gagtttttcaataggtttggatctggagaggctgctgcaatgtgtttgatgttggcagca
aagttaatttctgatgaagagaatataataagcaattcagtttctgagagggcagctgaa
acatttgaagatccagtcattgttggtatgccgcagcttgaaagtaatgctgttttgtca
agtgttagggccccagctggaggctttagcatgggacaggtggttccagaagcagagcct
ctattttctggtgctcatgaaggtctttgtttatgtgcatctaggctgctctttccagtg
tgggaactgcctgttatgactttccgaagggagattggctctgatgggcggtttgaagaa
ggtgtcatttgttgcagactccccagtagtgcaatgcaggttttagaaagtaaaattcgc
tctctagaacaattcttacggtccagaagaaataaaagaaggggactttatggttctgtt
gcttgtagaggtgattttactggttcaattttatatgggactcgttcagatgttggagct
aatagtcagaatgaagcgaggaacctttttggcttatcctctccaagtactgtttctgga
gatgctgctttcaataaaaggcagaggcttcttcatactagtgctgagctggctgcaata
gaggtgagggcaatggaatgtctaagaaggcttcttcggagatccagtgaagcacttttc
ttgttgcaaattgtttaccatcatcatgtaactcgtctggttcaggctttagaaggcaat
gttcgtcaaaagttagttcatttgacattcaaccagttagtatgttctgatgagggtgac
caactcgctatgcaacttatttctgggttgatggagtattatactggcactgatggcaga
ggtacagtagatgagattagtgcaaagctaagggaaggttgcccgagctacttcaatgaa
tcggactataagtatttccttgcggttgaatgtcttgaaagagcttttatgacaagcaat
gctgaggagagggaaaaccttgccagagctgcctttaatcatctaaccaaagttccagaa
tctgtagatctaagagccgtatgtaagcgatttgaagacctaagattttatgaagctgtg
gttcgcttaccattgcaaaaagctcaagctcttgatcctgaccgccgtgataattcactt
gttcaacgggaacaatgctatgaaacagtaatgaatgcccttcgttctctgaaaggggat
gttggtaatgtttctcgttcaggaaatatccttgatcaggcttctcgggacaaatatata
cgtcagatcattcaacttagtgttcagtggcctgatacagcttttcatgaacatttatat
aggacattaatcgaactgggccttgaaaacgagttgctggaatatgggggttctgatttg
gtttcatttctgcagagtgctggaaggaaactgcagcaagaggttcaagcagttgctgca
tcaacaccaattactactacaagagaactggagacgcctattccttctagtcaaaccaag
tatcttgatcttcttgcaagatactatgttatgaagcgtcagcatttgctggctgctcat
gttctctacaggttggcggaaagacaatgtactgatgctgcggatgctcctactttggac
cagaggcgccagtatttgagcaatgcagtcctgcaggctaaaagtgcaattagtattaat
ggttcattatcatcaaccatgagtaccatggataatggtctgttggatatgcttgaggcc
aaacttgctgttcttcgatttcaaatgaaagtaaaggaggagttggagtcaattgcattt
aaactagaagggcttcaggttactaatgaatcacatccaaatgacccttttccacgtgga
aatttggtttttgatgccaatacagcaaagattgctagagataaggctaaggagctggaa
ttgaatcttaagagcatcacccagttatacaatgattatgctgtaccttttcaactttgg
gagatatgcttggaaatgctcaactttgcaaactattctggagatgcggacagtaaaatt
gttagagaaacatgggctagactcgttgatcaggccctttcaagaggtggcattgctgaa
gcttgtgcagtattgaagagggtgggatcaaatctttatcctgtagatggatccttcata
cccttggacgcattatgccttcatctcgagaaggctgccctggaacgtttatcttctggc
attgaagtagttggagatgaagaaatagcaagaggtcttcttgcagcctgtcggggcaga
cctgaagctattttgtctgtttatgatcagttattatcaaatggagctattgtaccttca
caaaatctgaggctgcgtcttctgagatcagtccttgtggttcttcgtgagtgggttatg
ttggttcttgctaataagctaggcactacaacaactggagcttcctatatgtttggcgga
gcttcagcattagagcagacatcaatattacaaaaaggaatccgggataaaattgctagc
gctacaaacagatatatgaccgaggtgcgacggttggctctgccccaaagccagattgag
ccaatttatcagggcttcaaagagctcgaggagaagcttttgacaccatcctcttttcag
ccttactaa
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