Dendrobium catenatum: 110112183
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Entry
110112183 CDS
T05027
Name
(RefSeq) E3 ubiquitin-protein ligase UPL3-like isoform X1
KO
K10590
E3 ubiquitin-protein ligase TRIP12 [EC:
2.3.2.26
]
Organism
dct
Dendrobium catenatum
Pathway
dct04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
dct00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
110112183
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
dct04121
]
110112183
Enzymes [BR:
dct01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
110112183
Ubiquitin system [BR:
dct04121
]
Ubiquitin ligases (E3)
HECT type E3
110112183
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HECT
ARM_ARMC5
HEAT_2
Motif
Other DBs
NCBI-GeneID:
110112183
NCBI-ProteinID:
XP_020699967
LinkDB
All DBs
Position
Unknown
AA seq
1882 aa
AA seq
DB search
METRSRKRAEASSFNPPATRASKRPRSSSAASSNNPVASRTRQAATSAAASAMDSDYASG
GSRRERRSFGRNSGRDRDPPSDKGKEREPPEGSSRLREREREREIDREAERILGISFDSG
GADDDNDSEGGVGILHHNFSSASSALQGLLRKLGAGLDDLLPSSALSGSSSHQSSRLKKI
LSGLRADGEEGRQVEALTQLCELLSIGTEDSLGSFSVDSFVPVLVGLLNHESNPDVMLLA
ARALTHLCDVLPSSCAAVVHYGAVPCFCARLLTIEYMDLAEQSLQALKKISQEHPTACLR
AGALMAVLSYLDFFSTGVQRVALCTAANMCKKLPSDASDFVMEAIPLLTNLLHYHDAKVL
EYASVCLTRIAEAFASSPDKLDELCHLGLVAQAAGLISLSNSGGQASLSSSTYTGLIRLL
STCVSGSPLAARTLLLLGISGTLKDILSGSGLVANVSVHPALARPPEQIYEIVNLADELL
PPLPQGTVSLPIYSNVFAKGSAGKKISGSSSGKQETNGTSNEISSHEKLLRDQSELLQQF
GMDLLPVLTQIYGSSVNGPIRHRCLSVIGKLMYFSSAEMIPSLLSATNISSFLAGVLAWK
DPQVLIPALQIAEILMDKLPDIFAEKFVREGVVHAIDALIVSDSSTSVPSQSSLLEKKDA
ESISSRSRRHRRRNGGLNTDGGLFDEAKVLADGATGSPPSSQAPAANNSIRATVSNLAKA
FKDKHFPAVPGSTEVGVTEDLLLLRSLCSKLNASAVDVKTRAKGKSKACGASLFDSSTNM
EGDLDGVISEMLTELCKGNGVSTFEFIGSGVVIALLNYFSCGTFGKDRLSEANLSTLRQQ
VLLRYKSFLKLALPVGVKEGNEVPMSILVQKLQNALSALERFPVVLSHPSRSSGGGSARL
SSGLSALSQPFKLRLYRAQGEKSLRDYSSNVVLIDPLATLAAVEEFLWPRVQRSDSAQKI
SSSAGNPDAATATGGSAASPGTSTPASSHRPTTRSRSSLTIGGSVGKESCDRNASFSKGK
GKAVLKSTPDEKKGAQGRNTARRTSASEKDREMKPSHGDSNSEDDNLDVSLVEIDDALMI
EEDDVSDDEDDYHDEVLREESLPVCAPDKVHDVKLGDPADDSALPSSTSSGHTRPSASSN
KTVQARGSESTELRSGSAFSSRGAMSFAAAAMAGLASVSGRGIRGGRGRRGLPNGNENNG
KLVFSVGGKQLNKNMTIYQAIQRQLVLDEDDGDRLNGSELMPTDGSRFWSDIFTITYQTA
DNQADGSALGSSSSAKSLKSSPASSSGSDSRRQQLSLPDSILQGELPCDIEKSNPTYHIL
ALLRVLDGLNQLASRLRAQAVVDDYSNGKVTNLDGLYVAGVKVPPEEFINSKLTPKLVRQ
IQDALALCSGSLPSWCYQLTKACPFLFPFETRRHFFYTTAFGLSRALHHLQQQQNAENTS
AMSEREVRVGRLQRQKVRVSRNRILESAAKVMEMYSGQKAVLEVEYFGEVGTGLGPTLEF
YTLLSHDLQKVGLGLWRSNTSSEMQNDGEEVSIDDSSDGKKMAAEFSAQSDFVIAPLGLF
PRPWPLNADASEGSQFSKVVEHFRLAGRVMAKALQDGRLLDLSLSTAFYKLVLGQDLDLY
DIVSFDSEFGKILQELQILVSKKRLIKSVSEGNQRGASDLHFRGTPIEDLCLDFTLPGYP
DYILKEGKESMVVNIDNLEEYISLILDATVKTGIMRQMEAFRAGFNQVFDISFLQIFSPH
ELDYLICGRRELWEADTLADHIKFDHGYTAKSPAIINLLEIMAEFTPEQQHAFCQFVTGA
PRLPPGGLAALNPKLTIVRKHSSTATNTASNGSVISEAADDDLPSVMTCANFLKLPPYST
KEIMYKKLLYAINEGQGSFDLS
NT seq
5649 nt
NT seq
+upstream
nt +downstream
nt
atggaaacgcggagccggaagcgggcggaggcctcctcttttaatccccctgcaacccgt
gcctcgaagcgcccccgttcttcctcggccgcctcttctaataacccagttgcatcccgt
acccgccaagccgccaccagtgctgccgcttctgctatggattctgattatgcctccggt
ggtagtcgccgggagcgccgcagcttcggcaggaacagtgggagggacagggatccacct
tcggacaagggtaaggagagggagccacccgagggttcttctcgtcttcgcgaaagggag
agggagagagagatagatagagaagctgagagaatcctagggatcagcttcgacagtggc
ggtgcagatgatgacaacgatagcgaaggtggcgtgggtatcctccaccataacttcagc
tctgcgagcagtgctcttcaaggacttctgcggaaactaggtgcgggattggatgatctt
ttgccctcatccgccttgtcaggttcctcctcacaccagagcagcagactcaagaaaata
ctgtctggcttaagagctgacggggaggagggtcggcaggtggaggcactaacgcagctt
tgcgaattgttgtcgattgggactgaggattctctgggttcgttttcggtagactctttc
gtgcccgtcttggttgggcttctcaaccatgagagcaatcccgatgtgatgctgctcgct
gcaagggcacttactcatctgtgtgatgttttgccttcttcctgtgctgccgttgtgcat
tacggtgccgttccatgcttctgcgctcgacttctgacgatcgaatacatggacttggcg
gagcagtctcttcaagctctcaagaagatttcacaagagcacccaactgcttgtctgagg
gccggggcacttatggcagttctttcttatcttgacttcttctctaccggagttcagagg
gtggcattatgtactgctgccaacatgtgcaagaagcttccgtcggatgcatctgacttt
gtaatggaagcaattccattgctaacaaaccttcttcattatcatgatgcgaaggtgctt
gagtatgcctctgtttgcctaacaagaatagctgaggcatttgcatcatctcctgataaa
ttagatgagctatgccatcttgggttggttgctcaagctgctgggcttatatctttgagt
aactcaggaggacaggcttctcttagctcgtcaacatacacgggattgatacgcctccta
tcaacctgtgtcagtggatcaccattagcagctagaactcttctcctccttggtatcagt
ggaacccttaaagatattttgtcaggttctggtcttgttgctaatgtttcagttcatcct
gctttagcgagaccacctgaacagatttacgagatagttaatcttgcggatgagcttctt
ccgcccctgccacaaggaactgtttccctcccgatttattcaaatgtttttgcaaaaggg
tctgctggaaagaaaatctctggcagctcttcagggaagcaggagactaatggaacaagt
aatgaaatatcttctcatgaaaaattattgcgagatcaatctgaactgttgcagcagttt
ggaatggacctgcttcctgttttgacccagatatatggatccagtgtaaatggtccaatt
cggcatagatgtctttcagtcattgggaaacttatgtacttcagctctgctgagatgatt
ccttctttacttagtgcgacaaacatatcaagcttcttagcaggagttttagcttggaaa
gatccacaagtgctgatccctgctcttcagattgcagagattcttatggacaaacttcct
gatatttttgctgaaaaatttgtgagggaaggggttgtccatgctattgatgctctcata
gtttcagattcttcaactagtgttccttctcaatcatcgcttcttgagaagaaggatgcg
gagtccatctcatctcgctctcggcgacaccggcgccgtaatggtggacttaatacagat
ggtggtttgtttgatgaggcaaaagttctggcagatggagctactggttcaccaccatca
tcacaggctcctgctgcgaataatagcattcgggcaactgtgagtaaccttgccaaagct
ttcaaagacaaacactttcctgctgttcctgggtctactgaagttggtgtcaccgaggat
cttcttcttttgagaagtctttgttcaaaattgaatgcaagtgctgttgatgtgaaaact
agagcaaagggaaaatcgaaggcctgtggagctagtttgtttgatagctcaacaaatatg
gagggggatctggacggtgttatttctgagatgctaactgagctttgtaaaggaaatggt
gtatcaacttttgagttcattggtagtggtgttgttatagctttgctgaattatttttca
tgtggaacatttggaaaagatagactttcagaggccaacctatccacgcttagacagcaa
gttcttttaaggtacaagtctttcctaaaacttgctcttcctgttggtgtcaaggaaggg
aatgaagttcctatgagtatattggttcaaaagcttcaaaatgctttatctgctttggag
cgttttcctgttgtacttagccatccgtctagatcatctggtggtggaagtgctcgcctc
tcttctggtcttagtgcattgtcacaacccttcaagttgcgcttatacagagcacaaggt
gaaaagtctctgcgtgattattcttccaatgttgtactcatagatcctctggcaactcta
gcagctgttgaagagtttctttggccaagagtccaaaggagcgactctgcacaaaagatt
tcatcatcagctggaaatcctgatgccgccacagctaccggaggcagtgctgcatcacca
ggcacatcaactcctgcttctagtcatcggcctacaacaagatctaggtcatcactaact
ataggaggttcagtgggaaaggaatcttgtgatagaaatgcaagcttttcaaaagggaag
ggtaaagctgttctgaaatctacacctgatgagaagaaaggagcccaagggagaaataca
gcccgcagaacatcagcttcagaaaaagacagagaaatgaaaccctcacatggcgactct
aactcagaggatgacaacttggacgtgtctcttgttgagattgacgacgctctaatgatt
gaagaagatgatgtctcagatgatgaagatgattatcatgacgaggttttaagggaggaa
tctcttccggtttgtgcacctgataaagtgcatgatgtgaaattaggagatcctgctgac
gactctgcactcccttcttcaacaagtagtggacacacacggccttctgcttcttcaaat
aagaccgtacaagctagaggctcagaatctactgaattaagaagtggaagtgcatttagt
tcaaggggtgcaatgtcatttgctgctgctgctatggctgggcttgcatcggtaagtggt
agaggaatcagaggtggtagggggcgtcgtggacttccaaatggaaatgagaacaacggt
aagttggtattctctgtaggtggtaagcagcttaacaaaaatatgaccatatatcaggcc
atccaacgccaacttgtgctagatgaggatgatggtgataggttaaatggttctgagctt
atgcccactgatggaagcagattctggagtgatatttttactataacctaccaaactgca
gataatcaggctgatgggtcagctctagggtcctcttcctcagccaagtctttgaaatct
agtcctgcctcaagttctggttcagattcccggcgtcaacaactgtctcttcctgatagt
atcttgcaaggggaacttccttgtgacattgagaaatcaaaccccacataccacattttg
gcattactgcgtgtactggatggtttgaatcagctagcttctcgtctaagggctcaagct
gtggttgatgattattctaatgggaaggttactaatttggatggactttatgtagctggt
gtcaaagttccaccagaagagttcatcaatagcaaactaaccccaaagcttgtgcgacag
atccaagatgctcttgcattatgtagtggtagtcttccttcgtggtgttatcagttgacc
aaagcatgcccttttctttttccctttgagacaaggagacatttcttttatactactgcc
tttggactatctcgtgctttgcatcatcttcagcagcaacaaaatgctgaaaatactagt
gccatgagtgaaagagaggttcgtgttggaagattgcaacggcaaaaggttcgtgtttca
agaaaccgcatattagagtctgctgcaaaagttatggagatgtattctggccagaaggct
gtccttgaagtagaatattttggtgaggttggcacaggtttgggccccacattagagttc
tatactcttttaagtcatgaccttcagaaggttggacttggattatggagatccaacaca
tcctcagaaatgcaaaatgatggtgaggaagtgagcattgatgattcctctgatggaaaa
aaaatggctgccgagttttctgctcaaagtgattttgttatagctcctcttggattgttt
ccccgtccatggcctctaaatgctgatgcttctgagggtagccagttttcaaaagttgtc
gagcattttcgcttagctggtcgagtgatggcgaaagctctgcaagatggtcgacttttg
gacctttccctttcgacggcattttataagcttgtactcggtcaagaccttgatttatat
gatattgtttcatttgatagtgagtttgggaagatcttgcaagaactgcaaatccttgtt
agtaaaaaaaggcttataaaaagtgttagtgaaggtaatcaaagaggggccagtgatcta
cattttcgtggcactccaattgaagacctttgtctagattttacccttcctgggtatcca
gattacattcttaaagaaggaaaagaaagcatggtggttaatattgataacttggaagag
tacattagtttgatacttgatgctacagtcaaaactgggattatgcggcagatggaggca
tttagagcaggattcaaccaggtctttgacatttcctttctacaaatattttctccacat
gaattggattacctcatctgtggccgcagagaattatgggaggctgacacactggctgat
cacatcaaatttgatcatggatacaccgccaaaagtccagcaattattaatttgctcgag
attatggcagagttcactccagagcagcagcatgctttttgccagtttgtgacaggtgct
cccaggcttccacccggtggcttagctgctttaaacccaaagctgaccatagtgaggaag
cattcttcaacagcaacaaatactgcgtctaatggatccgtaatatctgaagcagctgat
gatgacctgccaagtgtcatgacttgtgccaattttctcaagctccctccttattccacc
aaggaaattatgtacaagaaacttctatatgccataaatgaaggacagggatcatttgat
ctttcttaa
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