Dendrobium catenatum: 110112228
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Entry
110112228 CDS
T05027
Name
(RefSeq) probable tRNA-splicing endonuclease subunit Sen2
KO
K15322
tRNA-splicing endonuclease subunit Sen2 [EC:
4.6.1.16
]
Organism
dct
Dendrobium catenatum
Brite
KEGG Orthology (KO) [BR:
dct00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dct03016
]
110112228
Enzymes [BR:
dct01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
110112228
Transfer RNA biogenesis [BR:
dct03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing endonuclease complex
110112228
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA_int_endo
tRNA_int_endo_N
RE_R_Pab1
Motif
Other DBs
NCBI-GeneID:
110112228
NCBI-ProteinID:
XP_020700036
LinkDB
All DBs
Position
Unknown
AA seq
240 aa
AA seq
DB search
MELSGSRWKGKGFADIAAENPMSEIVRKLKYFLTQSKETAMLSGCVSLLEAKTELADLLN
RSCFGRQITTSEKANHWFQLSSEETFYMLHDLQSLTIINQTESPLSELELWNYMKVNKER
FPELYMAYAHLRRKNWVVRTGAQYGADFVAYRHHPALVHSDYAVVVLQEGDGIVQKNGRL
RAWSDLQCSLRVSGSVAKTLLVLFVNRNGSDGAFPSCLQHFSVEERTITRWVAEQCREDE
NT seq
723 nt
NT seq
+upstream
nt +downstream
nt
atggagttaagtggctcaagatggaaggggaagggctttgctgacattgctgcagagaat
cccatgtctgaaattgtgaggaaactcaaatattttctcactcaatcaaaagaaacagct
atgctttccggctgtgtctccctccttgaggcaaagacagaacttgcagaccttttgaac
cgctcttgcttcggccgccagatcaccacatcagagaaggccaaccattggtttcagctg
agttcggaagaaaccttctatatgcttcatgatctccaatccttaactatcataaaccag
accgagagccctctcagtgaattggagctatggaattatatgaaagttaacaaggaaaga
tttccagagctctacatggcatatgctcatctcagaaggaagaattgggtggttcgaact
ggagctcaatatggtgcggactttgtggcttatcgtcatcacccagctcttgtgcattct
gattatgctgtggttgttcttcaggaaggtgatggcattgtccagaagaatgggagactg
cgagcttggtcggatttgcagtgcagtcttcgagtgagtggaagcgtcgcgaagacattg
cttgttctttttgtcaacaggaatggaagtgatggagctttcccttcttgtttgcaacat
ttcagtgttgaggagagaacaatcactagatgggttgcagagcaatgcagggaggacgag
tga
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integrated database retrieval system
