Dendrobium catenatum: 110112329
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Entry
110112329 CDS
T05027
Name
(RefSeq) ribosome maturation protein SBDS
KO
K14574
ribosome maturation protein SDO1
Organism
dct
Dendrobium catenatum
Pathway
dct03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
dct00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
110112329
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
dct03009
]
110112329
Ribosome biogenesis [BR:
dct03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
110112329
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SBDS_N
SBDS_domain_II
SBDS_C
C_GCAxxG_C_C
zf-C2H2_jaz
zf-C2H2_2
Motif
Other DBs
NCBI-GeneID:
110112329
NCBI-ProteinID:
XP_020700180
LinkDB
All DBs
Position
Unknown
AA seq
357 aa
AA seq
DB search
MSKTLVQPIGQKRLTNVAIVRLKKHGKRFEIACYKNKVLSWRSGVEKDLDEVLQSHTVYS
NVSKGILAKSKELYEAFKTTDQSVICKEILEKGELQVAGKERESQLSSQFRDIATIVMQK
TINPETQRPYTISMIERLMHEIHFAIDPHNSSKKQALEVIKELQEHFPIKRAPMRLRLIV
PERHLSTLMEKLGGWNANVVLKDASGGMPTVVCEIDPGHFRDCDALIRGFQGKLEILAVS
VFLEGDSNVYQQYDNTKDAESSSVQETESVVDLREKIMSNNISTENKSGEEQVKQNKCST
CDTIVGDVKQYREHFKSDWHKHNLRRRTRQLPPLSAEECLAEMELNEVNVDRKDYSF
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaagactttggttcagcccatcggacagaagaggctgacgaacgttgccatcgtc
cgcctcaagaaacatggcaagcggttcgagatcgcctgctataagaacaaggttctttca
tggcgatctggagtagaaaaagatttggatgaagtattgcagtcgcataccgtttattca
aatgtttcaaaaggaatcctcgcaaaatcgaaggagttatatgaagcttttaaaactact
gatcaatcagtcatatgcaaagagattttggagaagggagagcttcaagttgctggtaag
gagagggaatcgcaactatcgagccagtttagggatattgcaacaattgtgatgcagaag
accataaatcctgaaacacaacgtccttacactatcagcatgattgaacggctgatgcat
gaaatacattttgccattgatcctcataatagttctaagaaacaggctttggaagttatt
aaagagctccaggaacattttccaataaaaagagctcctatgagattgcggcttattgta
ccagaaagacacctttctactctaatggaaaagcttggtggctggaatgcgaatgtagtc
ttaaaagatgcatcaggtggaatgccaaccgttgtctgtgaaatagacccaggacatttt
cgagattgcgatgctttgattcggggctttcaagggaagctggaaatactagccgtctct
gtatttctagaaggggattccaatgtctaccagcaatatgacaatacaaaagacgctgaa
tcaagttctgtccaagagactgaatctgtagtcgatctgcgagagaaaattatgagcaat
aatatctcaactgaaaacaaaagcggtgaagaacaagtcaagcagaacaaatgcagcact
tgtgataccattgtgggagacgttaaacagtacagagagcactttaaaagtgactggcac
aaacataatttgaggaggaggacaagacagcttcctcctttaagtgcagaggaatgcttg
gctgagatggaattgaatgaagtgaatgttgatcgtaaggattactctttctaa
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integrated database retrieval system