Dendrobium catenatum: 110112466
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Entry
110112466 CDS
T05027
Name
(RefSeq) DNA gyrase subunit A, chloroplastic/mitochondrial
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
dct
Dendrobium catenatum
Brite
KEGG Orthology (KO) [BR:
dct00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dct03032
]
110112466
03400 DNA repair and recombination proteins [BR:
dct03400
]
110112466
Enzymes [BR:
dct01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
110112466
DNA replication proteins [BR:
dct03032
]
Prokaryotic type
DNA Topoisomerases
110112466
DNA repair and recombination proteins [BR:
dct03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
110112466
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
HTH_37
UPF0302
Motif
Other DBs
NCBI-GeneID:
110112466
NCBI-ProteinID:
XP_028550826
LinkDB
All DBs
Position
Unknown
AA seq
1207 aa
AA seq
DB search
MALSSMLRLTSSSLARFRPIFSASGHCPCCGFSELRFLSTGLPRRIPVLKARRRDKEETK
EGKVEDEGGNGTLLVKDSSGRGVWDGKIVATELHKEAKEAYMAYAMSVLLGRALPDVRDG
LKPVHRRILYAMHELGLSSRKPFRKCARVVGEVLGKFHPHGDTAVYESLVRMAQVDIQSF
YTSTFFLGGDFYKQFFALTQDDSVIEHRQRFEYVARQLNRLFETVLEGNLMKGLKPKIQA
AVRVMRPRDFVEDLTLGTLWETPKEKTVSGKPGDNFKKITEIELQEKRTKEIYFRCDERY
TPGHIYKALTEAMLLMDLEQNTVDFVPNFDNSQKEPSLLPARVPTLLLNGSSGIAVGMAT
NIPPHNLCELVDALTMLIHNPDASLQELLEYMPGPDFPTGGLIMGNIGILEAYRSGRGRI
IIRGKTEVESLDEKTKRIAIIIKEIPYQTNKAALVEKIAELVEDKIGIPNFVSLFRSGLN
HIQAAYPVDFLAAAIVLQLMLMFLAGKIQVSFGSSGFKIVQDLSTEPTFQLLVSRVGMAT
NIPPHNLCELVDALTMLIHNPDASLQELLEYMPGPDFPTGGLIMGNIGILEAYRSGRGRI
IIRGKTEVESLDEKTKRIAIIIKEIPYQTNKAALVEKIAELVEDKILDGISDIRDESDRT
GMRVVIELKRGSDPAIVLNNLYRLTALQSSFSCNMVGILDGQPKLMGLKELLQAFLDFRC
SVIERRAGFQLSQAKERKHVVEGIIIGLDNLDGVIRTIRETSNNAMALTTLMKKYSLSQK
QAEALLDITLRKLTLLERKKFVHESESLSEQISKLNELLSNKKNILKLIVQEAHELKSRF
GTPRSSLLEDGDGSQLEEIDVIPNEEMLLTLSEKGYVKRMKPNTFNLQRRGTIGKSVGKM
RVNDSMSDFIVCHTHDRILYFSDHGIVYSAPAYRIPECSRTAAGTPLVQLLSLTEGERIT
SIIPVSEFAEDQYLIMLTVKGYIKKVSLNVFSTIRATGIIAIQLTPGDELKWVRHCAHDD
LVAIASQSGMVTICSCNLLRVLGRKTRGVNSMRLKEGDKVASMDIIPSGMRKDFPRASDI
PGSRGRDISPPWLLFLSESGHGKRVPLSEFRLSRFRSVGLIGYKLQTDDRLAAMFVVGYS
LEEDGESDEQIVLVSQSGTVNRIKVRDISIQSRYARGVILMRLEHAGKIKSASLIAASAP
EEAELED
NT seq
3624 nt
NT seq
+upstream
nt +downstream
nt
atggccctctcctccatgctccgccttacgtcatcttcactcgcgcgcttccggccaatc
ttctccgcctccgggcattgcccctgttgcggcttctcggagctccgcttcctctcgact
gggctgcccaggcgaatacccgtgcttaaagcgaggcggagggataaagaagagactaag
gagggcaaagtggaagatgaagggggcaacggaacactgttggttaaggatagtagcggg
cgtggcgtttgggatgggaaaatcgtcgcaacggagctccataaggaagcaaaggaggcc
tacatggcgtatgcgatgtcggtgcttctcggccgtgccctcccggacgtgcgggatggg
ctcaagccggtgcaccgcaggatactgtatgcaatgcatgagttaggcctttcatctcgc
aagcctttcaggaaatgtgctagagtagttggagaggttttgggtaaatttcatccccat
ggagatactgctgtgtatgaatccctagtcagaatggcacaggtagatattcaaagtttt
tatacatcaacattttttttgggaggagacttctacaagcagttctttgctttgacacaa
gatgattcagtaatagagcataggcagaggttcgagtacgtggctaggcaattgaaccgt
ctttttgagaccgtactagaggggaatctcatgaagggattaaaaccaaagatccaggcg
gcagttagagtgatgaggcctcgtgactttgtagaggacctgacactaggcaccctttgg
gagaccccgaaggagaagactgttagtggaaaacctggggataacttcaagaagatcaca
gaaatagaattacaggagaaaaggacgaaggagatctattttagatgtgatgagaggtat
actccagggcacatatataaggcactcacagaagccatgcttttgatggatttagaacag
aatactgttgactttgttccaaattttgacaattcacaaaaggagccatctcttttgcca
gcccgtgttcctactttattgctgaatggttcttctggaattgcggttggcatggcaaca
aatattccaccgcataatctttgtgagcttgtggatgctctcacaatgttgattcataat
cctgatgcttcgcttcaagaactgctggaatacatgcctgggccagacttcccaacagga
gggctgatcatggggaatatcggaattttggaagcctatagaagtggtcggggacgtata
ataattagagggaagacagaagttgagtccctagatgagaagacaaaacgcatagcaatt
atcattaaagagatcccttaccagacaaacaaagctgcactagtggagaaaattgctgaa
ctagttgaagataagataggtattcctaattttgtaagtttatttaggagtggattaaat
catatccaggctgcctatcctgttgatttccttgctgctgccattgttctccagctgatg
ctgatgttccttgctggcaaaatacaagttagctttggatcatcaggcttcaagattgtc
caagatttgagcactgaaccaacttttcagcttttggtttcccgtgttggcatggcaaca
aatattccaccgcataatctttgtgagcttgtggatgctctcacaatgttgattcataat
cctgatgcttcgcttcaagaactgctggaatacatgcctgggccagacttcccaacagga
gggctgatcatggggaatatcggaattttggaagcctatagaagtggtcggggacgtata
ataattagagggaagactgaagttgagtccctagatgagaagacaaaacgcatagcaatt
atcattaaagagatcccttaccagacaaacaaagctgcactagtggagaaaattgctgaa
ctagttgaagataagatattagatggaataagtgatattcgggatgagagtgatcgcact
gggatgcgtgttgttatagagttgaaaaggggttcagacccagccattgtgctcaacaac
ctttaccgtctcacagctttgcaatctagtttcagctgcaatatggtaggaattcttgat
ggacagccaaagctgatgggtctgaaagagctacttcaggccttccttgattttcgatgc
tctgttatcgaaaggcgtgctggatttcagctttctcaagcaaaagaaaggaagcatgtt
gtagagggtattattatcggacttgacaatttggatggagtaatccgcacaattcgggag
acatcaaataatgcaatggctttgaccactttgatgaagaaatattcgttatctcaaaag
caagctgaagccttattagatataacgttgaggaaacttactttgcttgagagaaagaaa
tttgttcatgaaagtgaatcactgtcggagcaaatatcaaaactaaatgagcttctgtct
aataagaaaaacatactaaagctcatagtacaagaggcgcatgagttgaaaagcagattt
ggaactccaaggagctcactattggaagatggtgatggtagccaacttgaggaaattgat
gttattccaaatgaagaaatgcttttgacccttagtgagaaagggtatgttaaacggatg
aagcctaacaccttcaatttgcaaaggcgtggaacaattggaaagtctgttggaaagatg
cgtgtaaatgattctatgtctgactttatcgtctgtcatacgcatgatcgcattctttat
ttcagtgatcacgggattgtttattccgcacctgcctacaggattccagagtgctcaagg
actgcagctggaacacctttggtgcagcttctatcattgactgagggagaaagaattaca
tctataattcctgttagtgaatttgctgaagaccaatacctaattatgctgactgtgaaa
ggctatatcaagaaagtttctcttaatgttttttcaacaatcagagcaacagggataatt
gcaatccaactgacacctggtgatgagcttaaatgggttcgacactgtgcacatgatgac
ctcgttgcaattgcttcacaaagcgggatggtcaccatttgttcctgtaatctgcttcgt
gttcttgggaggaaaacaagaggtgtaaactccatgagattaaaagaaggggacaaggtt
gcatccatggacataataccttctgggatgcggaaagattttccaagagcttctgacatt
cctggtagcaggggcagagatataagtcctccatggctgctctttttatctgaaagtggt
catgggaagcgggtacctctaagtgaatttcgcttgtcaagatttagatcagtggggttg
attggctataagcttcaaacagatgatcggctagctgcaatgtttgttgttggatattcc
ttggaagaagatggggaaagtgatgaacaaattgttctagttagtcaaagtggaactgtt
aacagaatcaaggttcgggatatttctatccaatcacgctatgctaggggtgttattctc
atgagattggaacatgctggaaagatcaagtctgcttcactaattgcagcatcagcacca
gaggaagctgagctagaagattga
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integrated database retrieval system
