Dendrobium catenatum: 110112593
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Entry
110112593 CDS
T05027
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit B
KO
K07466
replication factor A1
Organism
dct
Dendrobium catenatum
Pathway
dct03030
DNA replication
dct03420
Nucleotide excision repair
dct03430
Mismatch repair
dct03440
Homologous recombination
dct03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
dct00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
110112593
03420 Nucleotide excision repair
110112593
03430 Mismatch repair
110112593
03440 Homologous recombination
110112593
03460 Fanconi anemia pathway
110112593
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
dct03000
]
110112593
03032 DNA replication proteins [BR:
dct03032
]
110112593
03400 DNA repair and recombination proteins [BR:
dct03400
]
110112593
Transcription factors [BR:
dct03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
110112593
DNA replication proteins [BR:
dct03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
110112593
DNA repair and recombination proteins [BR:
dct03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
110112593
MMR (mismatch excision repair)
110112593
DSBR (double strand breaks repair)
HR (homologous recombination)
110112593
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac-A_C
Rep-A_N
REPA_OB_2
tRNA_anti-codon
DUF223
CDC24_OB3
RRP40_S1
Motif
Other DBs
NCBI-GeneID:
110112593
NCBI-ProteinID:
XP_020700533
LinkDB
All DBs
Position
Unknown
AA seq
604 aa
AA seq
DB search
MAKTVTPGAIAMLLSNPSPDSTSEIAEIIVQVVDLKPIGSSTTRFTFMASDGKMKIKAML
PTHLSSEVNSGKLQNLGLIRILDYTCNTIPNQTDKALIVTKCEVVSPALDCEIKSEAEET
ATLLKPKEESVPKSAAQIVYEQRINAAPAARLSMTRRVHPLCSLNPYQGNWTIKVRVTNK
GNLRTYKNAKGEGQVFNVELTDEDGTQIQATMFNEAAKKFYPKFELGKVYYISKGTLRLA
NRQFKTVQNDYEMNLNENSIVEEAQGEGAFIPETKYNFVKIDQVGSYVNGREVIDVIGVV
QNVSPTVSVRRKINNETIPKRDITIADDSNMTVVVSLWNDLATTLGQELLELVDTAPVVA
IKALKVGDFQGVSLSTLSKSTLQINPDLPETKVLRSWYDSKGKDVTMAPIASTLSSISTK
TGQRSMYSDRVYLSHITNDQTLGQEKPVFFSIKAYVSLIRPDQAMWYRACKACNKKVTEA
VGSGYWCEACQKNDDQCSLRYIMVMKVSDSSGEAWVSVFNEHAEKIIGCSADELYRIKSE
EGEEKFQLKLKEATWIPHLFRVSVSLSEYMNERRQRITVRAQAPIDCSAEMRYMLEEISK
ISIS
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagacggtgacgcccggagcaatcgcgatgctactttccaacccttctccagat
tccacctcagagattgcggagatcatcgtgcaagtcgtcgatctgaagcctattggtagc
agcaccacccgcttcaccttcatggctagcgatggcaagatgaagatcaaggccatgcta
cctacccatctttcctctgaagtcaattctggaaaacttcagaatcttggcctcattcgc
attctggattacacatgcaataccatccccaaccaaactgataaggctttgattgtgaca
aaatgtgaagttgtttctcctgcacttgactgcgagatcaaatctgaagcagaggagaca
gcaacactgttaaagcctaaagaggaatcagtgccaaaatctgctgcacaaattgtttat
gagcagcgtattaatgctgctccggctgctcgattgtcaatgactagaagggttcatcct
ctttgttccttgaatccttatcaaggcaactggaccataaaagtaagagtaacgaataaa
ggcaatctacgaacatataagaatgccaaaggcgaaggtcaagtctttaatgtagaactg
acagatgaagatggtacccaaatccaggctacaatgtttaatgaagctgcaaagaagttc
tacccaaagtttgagcttggcaaagtatactacatttcgaaaggaactctgaggctagca
aacaggcagtttaaaacggttcaaaatgattatgagatgaacttaaatgaaaattctata
gttgaagaggcacaaggagagggagcttttattccagaaaccaaatataactttgtgaag
attgaccaagtaggatcttatgttaatggcagggaggttatagatgttatcggtgtggtt
cagaatgtttctccaactgtaagtgttcgaaggaaaatcaataatgaaacgattcctaag
cgggacataactattgcagatgactcaaacatgacagttgttgtgtctttatggaacgat
cttgctactactcttggtcaggaattactggaattagttgacacggcacccgttgtagct
attaaagcactcaaagttggagactttcaaggtgtttctttgtcaacgctgagcaaaagc
accctgcaaattaatccagatttgcccgagacaaaagtgcttagatcttggtatgattcc
aaaggcaaagatgtaacaatggcaccaatagcctccactttgagttccatctcaacgaaa
actggacagagatctatgtactccgatagagtttacttatctcacatcactaatgatcaa
acattgggccaggagaagcccgtcttctttagcataaaggcttatgtcagcttgatcagg
ccagatcaggctatgtggtatcgtgcttgcaaggcctgcaacaagaaggttacagaagct
gttggatctggatattggtgtgaagcatgtcagaagaatgacgaccaatgctctttaaga
tatataatggtgatgaaggtttcagattcatctggtgaagcttgggtttctgttttcaat
gagcatgcagagaaaatcattggatgctctgctgatgaactttacaggataaagtctgag
gagggagaggagaaatttcagctcaagctaaaagaagcaacatggattcctcatcttttc
agggtaagcgtctcattatcggagtatatgaatgagaggaggcaaaggataaccgtgaga
gctcaagcacctattgattgctccgctgaaatgagatatatgctggaagaaatctcaaag
atttcaatctcttaa
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integrated database retrieval system
