Dendrobium catenatum: 110112852
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Entry
110112852 CDS
T05027
Name
(RefSeq) E3 ubiquitin-protein ligase UPL3-like
KO
K10590
E3 ubiquitin-protein ligase TRIP12 [EC:
2.3.2.26
]
Organism
dct
Dendrobium catenatum
Pathway
dct04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
dct00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
110112852
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
dct04121
]
110112852
Enzymes [BR:
dct01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
110112852
Ubiquitin system [BR:
dct04121
]
Ubiquitin ligases (E3)
HECT type E3
110112852
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HECT
ARM_ARMC5
HEAT_2
PSP
MG280
Motif
Other DBs
NCBI-GeneID:
110112852
NCBI-ProteinID:
XP_020700874
LinkDB
All DBs
Position
Unknown
AA seq
1842 aa
AA seq
DB search
METRSRKRAEASSSNSSATRSTKRPHTSSDPPVATRTRQSSMDSDQASGRRDRRSSGRER
DPPEGSSREAERILGLSFDSAGADDDNDSETGVGVGILHQNFTNASSALQGLLRKLGAGL
DDLLPSSGVSGSSSSNQSSRLKKILAGLRADGEEGRQVEALTQLCELLSIGTEDSLGSFS
VDSFVPVLVGLLNHESNPDVMILAARALTHLCDVLPSSCAAVVHYGAVPCFCARLLTIEY
MDLAEQSLQALKKISQEHPTACLRAGALMAVLSYLDFFSTGVQRVALSTAANMCKKLPSD
AADFVMEAVPLLTNLLHYHDAKVLEYASVCLTRIAEAFASYPDKLDELCNHGLVAQTAGL
ISLSNSGGQASLSTSTYTGLIRLLSTCASGSPLAAKTLLLLGISGILKDILSGSSLVASV
SVFPALSRPPEQVYEIVNLADELLPPLPQGIVALPICSNFLVKGSAGKRIAGSSSAKQEE
ANGSKNEQSAHEKLLQDQPELVQQFGLDLLPILTQIYGSSVNGPIRHRCLSVIGKLMYFS
SAEMIQSLLSATNISSFLAGVLAWKDPQVLIPALQIAEILMDKLPRFFAKSFVREGVVHA
VDALIRSVSSNTIPEKDTDSVSSTSSRSQRYRRRNGGLNSDGGLLEEAKASTAGTGSSSP
LTEVSAANNSIRSAVSEFAKAFKDKHFPAVPGATEIGITEDLLRLRSLSSKLSAGADDVK
ARAKGKSKASVFDTSTSTEGELDAIISEMLIELSKGNGVSTFEFIGSGVVVALLNYFSCG
TFAKDRTAEVNLPNLRQQALRRYRSFIDLALPVGVKEQNEAPMNILVQKLQNALSSLERF
PVVLSHPSRSSSGGSARLSSGLSALSQPFKLRLCRAQGEKSLRDYSSNIVLIDPLASLAA
VEEFLWPRIQRSDSIQKTLASAGTPDVGASAVGGNASSLGTPTPSVHRPTTRSRSSLIIG
GTAGKESSEGNANSSRGKGKAVVKPTPDEGKGSQTRNAACRRAASVQDTETKPAHSDSDS
EDDLDMSPVDIDDALMIEEDDVSDDEEDDHDEVLRDDSLPVCTPHKVHDVKLGDSADELA
NAPSASDGHTQLPASTNKIAQARGSELAELRNISTLSSRGALSFAAAAMAGLASVSGRGI
RVGRERRGLPHGSSVREQYNKLIFTVGGKQLNKQMTIYQAIQRQLVLDEDDDDKLTGSEL
MPTDGSRFLSDIFTITYKKADNLAESAQGVSLSSDKSLKPGSASNSGWKQSSLLDSILHG
ELPCDIEKSSPTYNILALLRVLEGLNQLAPRLRVQKVADEYADGELATPDELYSSGARVP
PEEYINKKLTPKLARQLQDALALCSGSLPSWCYQLTKACPFLFPFETRRQYFYSTAFGLS
RALHRLQQQQNAENTGAANEREVRVGRLQRQKVRVSRNRILESAAKVMEMYSSQKAVLEV
EYFGEVGTGLGPTLEFYTLLSHDLQKVGLGLWRSNSSFDTSAMEFDGKEAKEANNYDASD
EENTAQSRDFIHAPLGLFPRPWPPNADVSEGSHFTKVLEYFRLLGRVMAKALQDGRLLDL
PLSTAFYKLLLGQELDLYDILSFDTEFGKILQELQILVSRKKVLETSGRGNQRVTTNLYF
RGAPIEDLCLDFSLPGYPDYILKEGEESTVVNIDNLEMYISLVIVATVKTGIMRQVEELR
AGFNQVFDISSLQIFSPQELDHLICGRRELWEPETMIDHIKFDHGYTVKSPAITNLLEIM
AEFTPEQQRSFCQFVTGAPRLPPGGLAALNPKLTIVRKHPSTTTNTALASNGTAISESAD
DDLPSVMTCANYLKLPPYSTKEIMYKKLLYAINEGQGSFDLS
NT seq
5529 nt
NT seq
+upstream
nt +downstream
nt
atggaaacgcggagccggaagcgggccgaggcctcctcttctaattcgtcggctacccgc
tcaacaaaacgcccccacacctcttccgacccccctgtcgctacccgcactcgccagtcc
tctatggactccgaccaagcctctggccgccgcgaccgccgtagctccggtagagagagg
gacccgcccgagggttcttctcgcgaagccgagaggatcttaggacttagcttcgatagc
gctggtgctgatgatgacaacgacagcgaaaccggcgttggagtcgggattcttcaccag
aactttaccaacgcgagtagtgcccttcagggacttttgcggaaactgggtgcgggtttg
gatgatctattgccgtcttcgggcgtgtcgggttcgtcctcgtctaaccagagtagtcga
ctcaagaaaattcttgctgggttgagggctgatggtgaggaggggcggcaggtcgaagcg
ctgacgcagctgtgcgagttgttgtcgattgggacggaggattctttaggatccttttca
gtggactcgtttgtgcccgttttagttgggttgttgaatcatgagagtaatcctgatgtg
atgatacttgctgcgagggcgcttactcatttatgtgatgttttgccgtcgtcctgcgct
gctgtagtgcattatggtgctgttccgtgtttctgtgctcggttgcttacgattgagtac
atggacttggcggagcagtctcttcaagctcttaaaaaaatttcacaagagcacccgacg
gcttgtttgagggctggggcacttatggctgttctctcttatcttgattttttctccaca
ggagtccagagggtagcattatctactgctgcaaatatgtgcaagaaacttccatccgat
gcagctgattttgtaatggaagctgttccattgttaacaaatcttcttcactatcatgat
gcgaaggtgcttgaatatgcctctgtttgcctgacacgaatagctgaggcatttgcctca
tatcctgataaattagatgagctttgcaatcatgggttggttgctcaaaccgctgggctt
atttcgttgagtaactccggagggcaggcttctctcagcacatcaacatacacgggtttg
attcgccttctttcaacatgcgctagtggatcacctttagctgcgaaaactctgttgctc
cttggtatcagtggaatccttaaagacatcttatcaggttctagtcttgttgctagtgtg
tcagtttttcctgccttatcaaggccgccagaacaggtttatgagatagttaatctcgcg
gatgagcttcttccgccactgccccaaggaattgttgccctcccgatttgctctaatttt
cttgtgaaagggtcggcgggaaagagaattgctggtagttcttcagcgaaacaggaggag
gctaatggatcaaagaatgaacaatctgctcatgagaaattattgcaagatcaacctgaa
ctcgttcagcaatttggtttggacctactgcctatcttgactcagatatatggctctagt
gtcaacggtccaattcgacatcgatgtctttcagtcattgggaaactaatgtactttagc
tcagcggagatgatccagtccttacttagtgcaacaaacatatcaagcttcttagccgga
gttttggcttggaaagacccacaagtactgatccctgctcttcagattgcagagattctt
atggacaagcttcctagattttttgccaaatcgtttgtgagagaaggggttgtccatgct
gttgatgctcttatccgttcagtttcttcaaatactattcctgagaaggacactgattct
gtgtctagcacatcatctcgttctcaacgttaccgaaggaggaatggtggactgaactcc
gatggtggtttgctggaggaggcaaaagcttcaacagctggaaccggtagttcatcacca
ctgacagaggtttctgctgcaaataacagcattcggtcagctgtgagtgagtttgccaag
gctttcaaagacaaacactttcctgctgttcctggggctactgaaattggcattactgag
gatcttcttcgtttgagaagtctttcttcaaaattgagtgctggtgctgatgatgtgaag
gccagagcaaaggggaaatctaaagccagtgtatttgatacttcaacaagtacggagggg
gagttggatgctattatttctgagatgctaattgaactcagtaaaggcaatggtgtatca
acatttgagttcattggtagtggcgttgtagtagctttactgaattatttttcatgtgga
acatttgcaaaagatagaaccgctgaggttaacctgccaaatcttcgtcagcaagcactt
aggaggtacagatcattcatagacctcgcccttccagttggtgtcaaggaacaaaatgaa
gctcctatgaatattttagttcaaaaacttcaaaatgctttatcttctttggaacgattt
cctgttgtacttagccatccttccagatcttccagtgggggaagtgctcgcctttcctcg
ggtctaagtgcattgtcacaacctttcaagttgcgcttatgtagagcacagggtgaaaag
tctctacgtgattattcttcaaatattgtactgattgatcctctggcaagtttagcagct
gttgaagagtttctttggccaaggatccaaaggagtgactctatacagaagactttagca
tctgcaggaactcctgatgtgggtgcttcggcagtgggaggcaatgcttcatcattaggt
acaccaactccttcagttcatcgtcctactactagatctaggtcatcattaatcatagga
ggtacagcgggaaaggaatcttccgagggaaatgcaaactcttcaagaggaaagggtaaa
gctgttgtgaaacctacacctgatgaaggaaaaggatcccaaacaagaaatgcagcctgc
agaagagcagcttcagtacaagacacagaaacgaaacctgcacatagtgactctgactct
gaggatgacttggatatgtctcctgttgatattgatgatgctctaatgattgaagaagat
gacgtctcagatgatgaagaggatgatcatgatgaggtgctgagagacgattctcttcct
gtctgtacacctcataaagtgcatgatgtgaaattaggagattctgctgatgaattggca
aatgctccttcagcaagtgacggtcatacacaacttcctgcttctacgaataagattgca
caagctagaggttcggagttggctgaattgagaaacataagcacacttagctcaagaggt
gcactgtcatttgctgctgctgccatggctgggcttgcatctgtaagtggtagaggaatc
agagttggtagggagcgccgtggacttccacatggaagtagtgttcgtgagcagtacaat
aagttgatattcacagttggcggtaaacaattgaacaagcagatgactatatatcaggct
atccaacgccaacttgtgctggatgaggatgacgatgacaaattaactgggtctgaacta
atgcccactgatggaagcagattcttaagtgatatttttactataacttataagaaggca
gataatctggctgaatctgctcaaggagtgtcattatcctcagataagtcgttaaaaccg
ggttctgcttcaaattcagggtggaagcaatcatctcttcttgatagcatcttgcatggg
gagcttccttgtgatattgagaaatcaagtcccacatacaacattttggcattattgcgt
gtgctggaaggtttgaatcaactagctcctcgtctaagagttcaaaaagtggctgatgag
tatgctgatggagagttagctactccggatgaattatattcatctggtgccagagttcct
ccagaagagtacataaataaaaagttaaccccaaagcttgcacgacaactccaagatgct
cttgcattgtgtagtggtagtcttccttcatggtgctatcaattgacaaaggcatgccct
tttctttttccatttgagacaaggagacaatatttctattctaccgcttttggactatct
cgagcgttgcatcgtttgcagcagcaacaaaatgctgaaaatactggtgccgccaatgaa
agagaggtccgtgttggtagattacaacggcagaaggttcgtgtttcaaggaatcgcata
ttggagtctgctgcaaaggttatggagatgtattcaagtcaaaaagctgttcttgaagta
gaatattttggtgaggttggtactggattaggtcccacactagagttctatactctttta
agtcatgatcttcagaaggttggacttggattatggagatctaactcatcatttgacaca
tctgcaatggaatttgatggaaaggaagcaaaggaagcaaataattatgatgcatctgat
gaagagaatacggctcaaagtagggattttattcatgctcctcttggattgtttcctcgt
ccgtggcctcccaatgctgatgtttctgagggtagccatttcacgaaagtcctcgaatat
tttcgcttgcttggtcgagtgatggcaaaagctttacaagatggcaggctcttggatctg
ccactttcgacagccttttataagcttttgcttggtcaagagcttgatttgtatgacatt
ctttcatttgatactgaatttggaaagattttgcaagagctgcaaatccttgttagccgg
aaaaaggttctagaaacatctgggagaggcaatcagagggtgacaactaatctttatttt
cgtggtgctccaattgaagatttatgtttagacttttcccttcctgggtatccggattac
attcttaaagaaggagaagaaagcacggtggttaatattgacaacttggaaatgtacatt
agtttggtgattgttgctacagttaagactggaattatgcggcaggtggaagaattgaga
gcaggtttcaaccaggtctttgacatttcctctctgcaaattttttctccacaagaattg
gatcacctcatctgtggccgtagagaattgtgggagcctgaaacaatgatcgatcatatt
aaatttgatcacggatacactgttaaaagccctgcaattaccaatttgctcgagataatg
gcagagttcaccccagagcagcagcgttctttctgccagtttgttactggtgctcctagg
cttccgcctggtggcttagctgcactaaacccaaaactaaccatagtgaggaagcatccc
tcaacaactacaaatacagcgttagcatcaaatggaacagcaatatctgaatcagcagat
gatgaccttccaagtgttatgacttgcgcaaattatctcaaacttcctccttattctacc
aaggaaattatgtacaagaaactcttgtatgccataaatgaagggcagggttcatttgat
ctttcctaa
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integrated database retrieval system
