KEGG   Dendrobium catenatum: 110113111
Entry
110113111         CDS       T05027                                 
Name
(RefSeq) protein RRC1
  KO
K12842  U2-associated protein SR140
Organism
dct  Dendrobium catenatum
Pathway
dct03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:dct00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    110113111
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:dct03041]
    110113111
Spliceosome [BR:dct03041]
 Complex A
  U2 snRNP components
   U2 related factors
    110113111
 Complex B
    110113111
SSDB
Motif
Pfam: Surp RRM_1 cwf21 CID RRM_7 CTK3
Other DBs
NCBI-GeneID: 110113111
NCBI-ProteinID: XP_020701200
LinkDB
Position
Unknown
AA seq 970 aa
MNSFSITRKKTPFQKHREEEEAKKKRAEDETARLYAEFVESFQGSDTPGSKTFVRGGTIN
PNEKLKTDSEGGNSKDGVSVPKKGTRYVPSFLPPASKGKESEKKKEEEKPKEKEKGKPRV
IDNFLEELKAEQELREKRNQEREQWREGRHSESSAPSSRFDELPDDFDFNGKLPGSFDDG
DPQTTNLYVGNLSPQVDENFLLRTFGRFGPIASVKIMWPRTEEERRRQRNCGFVAFMNRA
DGQAAKDEMQGVVIYEYELKIGWGKSVALPAQALPAPPPGQMAIRNKDGGTVVLSGPDGL
PITSVAGQNSELVLTPNVPDILVVPPEDKHLRHVVDTMALHVLDGGCAFEQAIMERGRGN
KLFNFLFELGSKEHSYYVWRLYSFAQGDTLQRWRTEPFIMITGSGRWVPPPLPTAQSPEH
VKETSSTYAAGRSRRVEVERSLTDPQRDEFEDMLRALTLERSQIKEAMGFALDNADAAGE
VVEVLAESLTLKETPIPTKVARLMLVSDILHNSSAPVKNASAYRTKFETNLPDIMESFND
LYRSVTGRITAEALKERVLKVLQVWADWFLFSDAYVNGLRVTFLRSGNSGVIPFHSICGD
VPEIENKTSTEDQSGGKLNQDAALAMGKGAAMKELLALPLAELERRCRHNGVSLVGGRDM
MVARLLYLEEAEKQGGSERDDEVRYGQNRSSRFSRDDDGWHANNAQSRDIDIVKETLSSS
KWNRNGEENIGENEEGFSDSTHHSTRPEARAYSRKSDRILPDSKWSRDDDASSEEDKKSS
LGLGLGYSSSGSENVGGIGRTDDAEVTTESDIFAHPDAGTSEEHRQKLRRLEVAVIEYRE
SLEERGIKSLEDIERKVASYRRKLQSEYGLLGSSESSNKQLSHKTSGRKEKRDDASDSSR
KRQRSKSHSRSPSKKLSSRERDEADRDRDRHRERDRFHDTESKREREKSGSREKDDHDSD
RSRDRRRKAK
NT seq 2913 nt   +upstreamnt  +downstreamnt
atgaactccttttccatcactcgaaagaagacacctttccagaagcatcgtgaagaggaa
gaagccaaaaagaagagagcggaagatgagactgctcgcttatatgcagagtttgtagaa
tccttccaggggagtgacacacctggatcaaaaacttttgttagaggcgggactattaat
ccaaatgaaaaactgaagactgattccgaaggtggaaattccaaagatggggtatctgtt
ccaaagaagggaactaggtatgtgccatccttcttacctccagcttccaaaggaaaagaa
tctgagaaaaagaaagaagaagagaaaccaaaggaaaaggagaaaggaaaaccacgggtt
attgacaattttcttgaggagctcaaggctgagcaagagttgagagaaaagcggaatcaa
gaacgtgaacaatggcgtgaagggcgtcatagtgagagttcagctccatccagccgtttt
gatgaactgccagatgattttgattttaatggaaagcttcctggttcattcgacgatggt
gatccccaaacaacaaatttgtatgttggaaacctctcaccacaggttgatgaaaatttt
cttctgaggacatttggtaggtttgggccaatagcaagtgtgaagattatgtggcccaga
acagaggaggagcggaggcggcaaagaaattgtggttttgttgctttcatgaacagggct
gacggacaggctgctaaagatgaaatgcaaggtgtcgtgatatatgagtatgagcttaag
attggctggggaaaatctgttgcacttccggcacaggccctccctgctccaccaccagga
cagatggctatccgtaacaaagatggcggtactgtggtcttgtctggacctgatggtttg
ccaattacttctgtcgccggccaaaattctgagctggttctcaccccaaatgttcctgat
atattggttgttcctcccgaagataaacatctgcgtcatgtggttgacacaatggcattg
catgttcttgatggaggatgtgcttttgaacaagcaataatggaaaggggtcgtggaaat
aagctgttcaacttcttatttgaacttgggtcaaaagaacacagttactatgtatggaga
ctctactcttttgcccagggtgacaccttacagcggtggcgtacagaaccttttataatg
attactggaagtggcaggtgggtccctccccccttgccaaccgcacaaagccctgagcat
gtgaaagaaacttcttccacatatgctgcaggtagaagcaggcgtgtggaagtagaacgg
tctttgacagatccacagcgagatgaatttgaggatatgttgagggcattaaccttggaa
aggagtcagataaaagaggccatgggttttgctttggataatgcagatgcagcaggggag
gttgttgaagttcttgcggaatcattaacgctcaaggaaacaccgatacctacaaaagta
gccaggcttatgctagtatcagacatccttcataacagcagcgctcccgtgaaaaatgct
tctgcatatcgcacgaagtttgaaactaacttacctgatataatggaaagcttcaatgac
ttatatcgtagtgttacaggaagaatcacagctgaagcccttaaggaacgagttttgaag
gtccttcaagtttgggcagattggtttctcttttcagatgcatatgtgaacgggctccga
gttacctttcttcgatcagggaactctggtgtaataccttttcattcaatttgtggtgat
gttcctgaaattgaaaataaaactagcactgaagatcaatcaggaggaaaacttaaccaa
gatgctgcattagcaatgggaaaaggtgcagccatgaaggagctcttggctcttcctctt
gctgaacttgaaaggcgctgtaggcataatggtgtctctcttgttggtggtagggatatg
atggttgctagattactctatctggaagaagctgaaaagcagggaggctctgaacgagat
gatgaagtaagatatggacaaaaccggtccagtagattttcaagggatgatgatggctgg
catgcgaataatgctcagagtagagacattgacattgtcaaagaaacactaagctcttct
aaatggaatcgaaatggtgaagaaaatattggggaaaatgaagaaggtttttcagattca
actcatcattctacccggcctgaggcaagagcttattcaagaaagtctgatcgtattttg
cctgattccaaatggagccgtgatgatgatgccagcagtgaggaagacaagaaaagttct
cttggtttaggcttgggttattcttcatctggaagtgaaaatgttgggggtattggaagg
acagatgatgctgaggtgactactgagtctgacatttttgctcaccctgatgcaggcacg
agtgaggaacacaggcagaaactacgtcgtttagaggttgctgtaatcgagtatcgtgaa
tctcttgaagaaagaggcataaaaagcttggaggacattgaaagaaaggttgcaagttat
cgtagaaagcttcaatctgaatacggcttattaggttcatcagagagtagcaacaagcag
ttatctcataaaacatcggggaggaaggagaaacgagatgatgcctctgattcttcaagg
aagcgccagcggagcaagagccacagccgaagtccttcaaagaagctttcttccagggaa
agggatgaggccgatagagatcgcgaccggcacagagagagagacaggtttcatgacact
gaaagtaagagggagagagagaagagtggaagcagagagaaggatgaccatgacagtgat
cggagcagagatcgtcgaagaaaggcaaaatga

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