Dendrobium catenatum: 110113266
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Entry
110113266 CDS
T05027
Name
(RefSeq) DExH-box ATP-dependent RNA helicase DExH14 isoform X1
KO
K18663
activating signal cointegrator complex subunit 3 [EC:
5.6.2.4
]
Organism
dct
Dendrobium catenatum
Brite
KEGG Orthology (KO) [BR:
dct00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dct03400
]
110113266
Enzymes [BR:
dct01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
110113266
DNA repair and recombination proteins [BR:
dct03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
110113266
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec63
DEAD
SNRNP200_wHTH
DExH14_plug
ResIII
Helicase_C
AAA_22
DEXQc_Suv3
T2SSE
AAA_19
Motif
Other DBs
NCBI-GeneID:
110113266
NCBI-ProteinID:
XP_020701424
LinkDB
All DBs
Position
Unknown
AA seq
2080 aa
AA seq
DB search
MLTQLPRLTNSLRDHFDVDRAYLQRKEILRNIKSRRLRDDLELARRLVHGWDDVSSDVRL
AYKQFLGSVRELMDGEFSSDEFEEVAMFIYGLFNVPDIDIKRRIFEKNRGELQKLVGYSV
QDSSLQKVAESAHRLYMLQGDDPEIASTWTGIADRHCEAIEFGSNIAFKVPARFLVDAPL
ENGATSVVDSFVSVIPHEGQHLMNGQYALNAEREVVSLRWLKDACEGIVKQGSSPLSGDD
LALALCRLLLSNKAGDEIAGDLLDLVGDGAFEVVQYLLLHRKELVDTIQYGLFILKSEKM
ASNGQARMPSYGTQVTVQTESERQMDKLRRKEEKRHKRGMDQEGMQDIPADSFASLLIAS
EKKQPFDDLIGTGQGPNSFSVSALPQGTTRFHGSNYEEVRIPPTATAPIRPDEKLIEISE
LDDFAQAAFRGYKSLNRIQSRIFHTTYYSNENILVCAPTGAGKTNIAMISVLHEIKQHFR
DGILRKEFKIVYVAPMKALAAEVTSTFSQRLSPLNLVVKELTGDMQLSRNELEQTQMIVT
TPEKWDVITRKSSDMSMSMLVKLLIIDEVHLLNDDRGSVIEALVARTLRQVESTQSMIRI
VGLSATLPNYLEVAQFLRVNAETGLFFFDSSYRPVPLAQQYIGISEKDFAKRNELFNKIC
YAKVVESVKQGHQAMVFVHSRKDTGKVARMLLESAQFAGQLEFFSNEDDPQFSLVKKEVG
KSRNRELVQLFDFGFGIHHAGMLRADRGLTERLFSAGHLKVLVCTATLAWGVNLPAHTVV
IKGTQLYDPKVGGWRDLGMLDVMQIFGRAGRPQFDKSGEGIIITSHDKLAYYLRLLTSQL
PIESQFISSLKDNLNAEVALGTVTNVKEASAWLGYTYLFIRMKTNPLAYGVAWDEVIADP
SLSSKQRSLIIDAARSLDKAKMMRFDEKSGNFYCTELGRIASHFYLQYSSVETYNEMLRR
HMSESELINMVAHSSEFENIVVREEEQEELEKLSKVFCPLAVKGGPSDKHGKISILIQVH
ISRGSMDSFSLISDAAYISASLGRIMRALFEICLRRGWCEMSFLILDYCKAVDRQIWPQQ
HPLRQFDKDVPSEVLKKLEEKGADLDHLLEMEEKDIGVLIRYVPGGKVVKQYLSYFPNII
LSANVSPITRTVLKVDVLITPNFVWKDRFHGASERWWFSVEDSENDHIYHSELFTLTKKM
AMGEYQKISFTVPIFEPHPPQYYIRAVSDSWLHAESIYTVSFNNLTLPETQTSHTELLDL
KPLPVSCLGNQTYDNLYKFSHFNPIQTQIFHVLYHTESNVLLGAPTGSGKTISAELAMLQ
LFNTQPDMKVVYIAPLKALVRERMIDWRKRLVSQLGKKMVEMTGDFTPDIMALLSADIII
STPEKWDGISRSWHSRAYVMKVGLMILDEIHLIGTDRGPILEVIVSRMRYISSQTARSIR
FIGLSTALANARDLADWLGVGEVGLFNFKPSVRPVPLEVHIQGYPGKFYCPRMNSMNKPA
YAAICTHSPLKPVLIFVSSRRQTRLTALDLIQLAAADDNPRQFLNMPEDEVEMVLSQVTD
NNLRHTLQFGIGLHHAGLNDKDRSLVEELFANNRIQILVCTSTLAWGVNLPAHLVIIKGT
EYYDGKTKRYVDFPITDILQMMGRAGRPQFDQHGKAVILVHEPKKSFYKKFLYEPFPVES
NLREHLHDHIIAEIVTGTIRHKEDAVNYLTWTFLFRRLVLNPSYYELEDTESKTINTYLS
RLVQNTLEDLEDSGCIKVNENSVAPMMLGSIASQYYISYMTVSMFGSNIGPNTSLEVFLH
ILSGAAEYDELPVRHNEEKLNEALSTRVPYLVDEQRLDDPHVKANLLFQAHFSRLEMPIS
DYVTDLKSVLDQSIRIIQAMIDISANNGWLTSTMNCMHLLQMVMQGLWYGSDSSLWMLPS
MTEDVLSRLNKHDIFSMQELVELPNSKLEMLLEKNCASKLYQELLNFPRVKVKVNLQKND
EQGSASRALDIRLEKRNHKHTSSRAFVPRFPKVKDEAWWLVLGNVTTSELYALKRVSFSD
RMLTRMELPSTPLNFQETKLLLVSDCYLGLEQQYSIEASH
NT seq
6243 nt
NT seq
+upstream
nt +downstream
nt
atgttgacgcagctgccgcgcctaactaattccctaagagatcacttcgatgtcgatcgt
gcgtatctgcagcgcaaggagatcctacggaacatcaaatcaagaaggttgcgcgatgat
ttagaacttgctcgaaggctggttcacgggtgggacgatgtttcaagtgatgttcgacta
gcttataagcagtttcttggttctgtgcgggaattgatggatggagaattttcttcagat
gagtttgaagaggttgcaatgttcatatatggtttatttaatgttcctgacattgacatc
aagaggagaatctttgaaaagaacaggggagaattgcaaaagcttgttggatactctgtg
caggattcaagtcttcagaaagtagctgaatcggctcataggctttacatgttgcaaggt
gatgatcctgagattgcatctacctggacaggtattgctgatagacattgtgaagccata
gagtttggctctaatattgcattcaaggtccctgctcgcttcctcgtggacgcgccgttg
gaaaatggtgcaacttcggtggttgatagttttgtgagtgtgatccctcatgaggggcaa
cacttgatgaatggacagtatgctttgaatgctgagagggaagttgtgagtttgagatgg
ctgaaagatgcttgtgaagggattgttaaacaaggaagctcgccactttctggagatgac
ctggcattggctttatgccgacttcttttatccaacaaagcaggcgatgagattgctggt
gatctgttggacctcgttggtgatggtgcttttgaagtagtacagtatcttctattgcac
cggaaggagctagtggataccatccaatatgggctgtttatactcaagtctgagaaaatg
gcttcgaatggccaagcaaggatgcctagttacggcactcaagtcaccgtgcagacagaa
tctgagcgccagatggataaactaaggcgaaaagaggagaaacgacacaaacgagggatg
gatcaagaaggcatgcaggatattcctgcggacagttttgcatctctgttaattgctagt
gaaaagaagcagccatttgatgatttgatagggactggtcaaggccccaattcattttct
gtgtccgctcttccacaaggtacaacgaggtttcatggaagtaattatgaagaagttagg
attccaccaacagcaacagcaccaataaggcctgatgagaagctgattgagataagtgag
ctagatgattttgctcaagcagcttttcgtggttacaagtcccttaatcgcatacagagt
cgcatattccacacaacttattactcgaatgagaatattctagtttgtgcccccactggt
gcagggaagactaatattgcaatgatttctgttcttcatgagatcaagcagcatttcagg
gatggcattttgcgcaaggaatttaagattgtgtatgtggctccaatgaaggccttggca
gcagaggtgacgtccactttcagtcaacggttgtcacccttaaatctagttgtgaaagaa
cttacaggcgacatgcagctttctaggaatgagctcgaacaaactcagatgatagtgaca
acacctgagaagtgggatgtgattactcgaaaaagtagcgacatgtcgatgtcaatgtta
gtgaagcttttaatcatcgatgaggtgcaccttctgaatgatgatagaggctctgtcata
gaagctttggttgctcgcacgcttcgacaggttgagtcaactcagtcgatgataaggatt
gttgggttatctgcaacattgcctaattatttagaggttgcccagtttttaagggtcaat
gcagaaactggattgttcttttttgattctagttatcgaccggttcctctagcccagcag
tacattggcattagtgaaaaagactttgctaaaagaaatgaactgttcaataagatatgc
tatgctaaggttgtagaatcagtgaaacaaggacatcaagcaatggtttttgttcactca
cgcaaagacactgggaaagtcgcgagaatgctgcttgagtctgcccaatttgctggacag
ttggagttctttagcaatgaagatgatcctcaattttctttggtcaagaaagaagtcgga
aaatcgagaaatcgtgaacttgttcagttgtttgactttggatttggcatccatcatgct
ggtatgctacgtgctgatagaggcttgacggagagacttttttcagccggacatttgaaa
gttcttgtatgtactgcaactttggcgtggggagtaaatcttccagctcacactgtggtt
atcaaggggactcaattatatgatccgaaggttggtggctggcgagaccttggaatgctt
gatgttatgcagatatttggacgtgctggtcgtccacagtttgataaaagcggggaaggc
ataataattacatctcatgacaaactagcctattacctaagactattgaccagccagctg
cctatagaaagccagtttattagctccttgaaggacaacctgaatgcagaagttgccctg
ggaacagtaaccaatgtcaaagaagcttctgcatggcttggatatacatatttattcata
aggatgaaaacaaatccattggcatatggagttgcatgggatgaggtcattgctgatccc
tccttgtcatccaaacaaaggtccttaataatagatgctgcacgttctcttgacaaggca
aagatgatgcgatttgatgagaaaagcggtaatttttactgcacagagctaggtcgtata
gctagtcatttttaccttcagtactcaagtgttgaaacttacaatgaaatgctaagacgc
cacatgagcgagagtgaacttatcaatatggttgctcattcttctgaatttgaaaatatc
gtcgttagagaagaggaacaggaggaacttgagaaattgtctaaagtattttgtccttta
gcagttaaaggtggaccaagtgataaacatgggaaaatttcaattcttattcaggtgcat
atatcacggggctcaatggatagtttttctttgatatctgatgcagcatatatcagtgcc
agtttaggtcgcattatgcgagctttatttgaaatatgcttacgccgaggctggtgtgag
atgtcctttttaattttggactattgcaaggccgtggatcgtcaaatttggcctcaacag
catccattgagacaatttgataaggatgttccatcagaagtactaaaaaaacttgaagaa
aagggagctgatttagaccatctgcttgagatggaagaaaaagacattggtgtcctaatt
cgttatgttcctggagggaaggtggtcaagcaatatctcagttatttcccaaatatcata
ttatctgcaaatgttagtccaattacgagaactgttctcaaggtagatgtgcttataact
ccaaactttgtttggaaggatcgttttcatggtgcctctgaacgttggtggttttctgtt
gaggattctgaaaatgatcatatctatcattcggagctcttcacattaactaagaagatg
gcaatgggagaatatcagaagatctctttcactgtaccaatatttgagccacatccacca
caatactacatacgtgcagtttcggattcatggttacacgcagaatcaatttatactgta
tctttcaataatctgacattgccagagacacaaacatcacatacggagcttctagacttg
aaaccccttcctgtgagctgtcttggaaatcaaacttatgacaacctatacaaattttca
catttcaatccaatccaaactcagatatttcatgtcctttaccacacagagagcaatgtc
ctcctaggagcaccaacaggaagtggaaaaacaatatctgctgagctggcaatgctgcaa
cttttcaatactcaacctgatatgaaggtagtttacattgcaccacttaaagctttagtt
cgtgaaagaatgattgattggagaaagcggctagtttctcagcttgggaaaaagatggtt
gagatgactggggattttactccagatattatggcactattatcagctgatatcatcatt
tctactcctgaaaagtgggatggaattagtaggagttggcacagtcgagcttatgtgatg
aaggtgggacttatgatattggatgagattcatttgatcgggactgaccgtgggcctatt
cttgaggtcattgtttcaaggatgcggtatatatcatctcaaacagcacgttccattcgt
ttcattggtctctcaactgctcttgctaatgcacgtgatttggctgattggttgggtgtt
ggagaggttggtcttttcaatttcaagcctagtgtcagacctgtaccccttgaagtacat
attcagggctatccggggaagttctactgcccaagaatgaatagcatgaataaacctgca
tatgctgccatttgtacccattcccccttaaaacctgttcttatttttgtttcttctcgg
cgtcagactaggcttacagcattagatctcattcagcttgcagctgcagatgataatcca
agacagtttttgaatatgccagaagacgaagtagaaatggtcctttcacaagttactgac
aataatttgagacatactttgcagtttggaattgggcttcaccatgcaggtttaaatgac
aaggatagatctttagtagaggaactatttgcaaacaacaggatccagatcttagtatgt
actagcacgctggcttggggagtaaaccttccagctcatcttgttattattaaggggact
gaatattatgacggaaaaacgaagagatatgttgatttcccgataaccgatattttgcaa
atgatgggtcgtgcaggtcggcctcagtttgaccagcatgggaaggctgtcattcttgtt
cacgaaccaaaaaagagcttttacaagaagtttctttatgagccattcccagttgaaagt
aatctgagagaacatctacatgatcacataattgcagaaattgttaccggcacaattagg
cataaagaggatgccgttaattatctaacatggacctttctttttcgtcggttggttctg
aatccatcttactatgaattagaggatacggagagcaagaccataaacacttatctgtcg
aggctggtgcaaaatacattagaagatctggaagacagtggttgcatcaaggtgaatgaa
aatagtgtggcgccaatgatgctgggttcaatagcatctcagtattatatcagttacatg
actgtatcaatgttcggttcaaatattggaccaaatacttcattggaggtttttcttcat
atcctttctggtgcggctgaatatgatgagcttcctgtgaggcataacgaggaaaagctg
aatgaagcattatctacaagggttccgtatttggttgacgagcagcgtcttgatgaccca
catgttaaagcaaatttgctgtttcaggcacatttttctcgtttagaaatgccaatcagt
gactatgtaactgatttaaaatcagttcttgatcaaagcatacgcatcatacaggcaatg
attgacatatcagcaaataacggatggctgaccagcacaatgaattgcatgcatctactg
caaatggtcatgcagggtttatggtatgggagtgattcatctctgtggatgctgccaagt
atgaccgaggatgttctaagccgcctcaacaaacatgacatcttttctatgcaagagcta
gttgagcttccaaattctaagcttgagatgcttttagaaaaaaattgtgcttcaaaacta
tatcaggaacttctaaattttccccgtgttaaggtaaaagtaaaccttcaaaagaatgat
gaacaaggttcagcttctcgagctctggatatcagattagaaaagagaaatcataaacat
acatcatcaagagcatttgttccccgattcccaaaggtgaaagatgaggcctggtggttg
gttctgggaaatgttaccacttcagaactctatgccttgaaaagagttagtttttctgat
cggatgctcactcgcatggagttaccatcaacaccactcaattttcaggaaacgaagctt
ctgttggtttctgattgttatcttggactggagcaacaatactctattgaagcatctcat
taa
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integrated database retrieval system
