Dendrobium catenatum: 110113419
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Entry
110113419 CDS
T05027
Name
(RefSeq) transport inhibitor response 1-like protein Os05g0150500
KO
K14485
transport inhibitor response 1
Organism
dct
Dendrobium catenatum
Pathway
dct04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
dct00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
110113419
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
dct04121
]
110113419
Ubiquitin system [BR:
dct04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
110113419
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Transp_inhibit
F-box_5
LRR_At5g56370
LRR_6
F-box-like
F-box
LRR_5
Motif
Other DBs
NCBI-GeneID:
110113419
NCBI-ProteinID:
XP_020701666
LinkDB
All DBs
Position
Unknown
AA seq
581 aa
AA seq
DB search
MGGGGGWVAAAMFPDEVWEYVFSFVEGDVERNAISLVCRGWHRIERRCRRRIFVGNCYAV
SPQTVLRRFPEVRAVTIKGKPHFADFNLVPSDWGGGASVWVEALAEACPQLEELRLKRMV
VTDDCLELIGRSFRNFKVLSLTSCEGFSTAGLASVANNCRNLRELDLQENVIEDNCSNWL
SHFPESFTSLISLNIACLDGDVNLFLLERLVSRCSNLKTLRLNHSVPLDRLVSILLKAPQ
LIDLGTGRFSADSRPELLAKLESSFAGCRNLKSLSGFYEAVPAYLPTIFSVCDGLSSLNL
SYATIQSAELTKLITRCKNLQRLWVMDLIEDTGLEAVASSCKLLRELRVFPFDPYGAEHV
SLTERGLVSVSAGCPMLRSVLYFCQQMTNAALIMVAMNSPNLTCFRLCIMEPHTPDYLTS
QPLDAGFSAIVESCKELRRLSLSGHLTDRVFKSIGTHADQVKMLSVAFAGDTDAGLHYIL
SGCKSLKKLEIRDCPFGDKALLANAAKLETMRSLWMSSCYVSLGACRLLAQRMPRLNVEV
IDEQRGGQLASRPDDCRVEKLYIYRTVAGRRSDMPACVWTL
NT seq
1746 nt
NT seq
+upstream
nt +downstream
nt
atgggaggcggcggaggatgggtggcggcggcgatgtttccggatgaagtgtgggagtac
gtgttctctttcgtggagggcgatgtggaacggaacgcgatctcgctggtttgtcgcgga
tggcaccggatcgaaagacgttgccgtcgccggatcttcgtcggaaactgctacgctgtc
tcgccacaaacggtgttgcgtcggtttccggaggtgagggcggtgaccatcaaggggaag
cctcacttcgccgatttcaatcttgtgccgagtgactggggcggtggggcttctgtatgg
gtggaggctttggcggaggcttgtccgcagctggaggagcttcggcttaagagaatggtg
gtaaccgacgactgcctcgagctcatcgggaggtcttttcgaaactttaaggtgctatca
cttacttcatgtgaaggtttcagcaccgccgggctggcatctgtagctaacaattgcagg
aacctaagggagttagacctgcaggagaatgttattgaagataactgcagtaactggcta
agccatttcccagaatcttttacctccttgatctctcttaacatcgcatgccttgatggg
gatgttaatttgtttttacttgagcggcttgtaagtagatgctccaatctcaagaccctc
aggcttaatcactccgtccctcttgataggcttgttagcattctccttaaggctccacag
ctgattgatctgggaacaggccggttttcagcagattctcgcccagaacttcttgccaag
cttgaatcatcatttgcaggatgtagaaatcttaaaagcctttctggattctatgaagct
gttcctgcttatcttccaactatcttctcagtttgtgatggactcagctcccttaatttg
agctatgctaccattcaaagtgctgaacttacgaagctaattacccgttgtaaaaatctc
cagcgcctatgggtcatggacttgattgaagatactggcctggaagcagtggcatcatct
tgcaagcttcttagggagcttagagttttccctttcgatccatatggtgcagaacatgtt
tctctcactgagagggggcttgtgagtgtgtcagcaggttgcccaatgcttcgatcagtt
ctctacttctgtcaacagatgacaaatgctgcactgatcatggttgctatgaacagtccc
aatttgacttgctttcgcctttgcattatggaaccacacactccagactatttgacaagt
cagccactagatgctggtttcagtgccattgttgaatcatgcaaggagctccgccgcctc
tctctctccggccatctcactgatcgcgtgttcaaatccattggaacacatgcagatcaa
gttaagatgctttcggtcgccttcgccggagatactgatgctggccttcattatatcctg
tcaggctgcaagagcctgaaaaaactggagattagggactgcccattcggtgataaggct
cttctggccaatgctgcgaagctcgagacaatgcgatccctttggatgtcgtcgtgctat
gtaagcttgggagcttgcagattattggcgcagaggatgccgaggctgaacgtagaggtt
atcgatgagcagcgaggagggcagctggcatctcgccctgatgattgccgtgttgaaaag
ctctacatttacaggaccgttgccggtcgaagatctgacatgccggcttgtgtttggacc
ctatag
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