Dendrobium catenatum: 110113457
Help
Entry
110113457 CDS
T05027
Name
(RefSeq) protein ROOT INITIATION DEFECTIVE 3
KO
K14829
pre-rRNA-processing protein IPI3
Organism
dct
Dendrobium catenatum
Brite
KEGG Orthology (KO) [BR:
dct00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
dct03009
]
110113457
Ribosome biogenesis [BR:
dct03009
]
Eukaryotic type
Pre-60S particles
5-FMC complex
110113457
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_Prp19
WD40
Beta-prop_EML_2
WD40_WDHD1_1st
WD40_CDC20-Fz
WDR55
NBCH_WD40
EIF3I
Beta-prop_EML
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_C
WD40_MABP1-WDR62_2nd
WD40_MABP1-WDR62_1st
Beta-prop_CAF1B_HIR1
ANAPC4_WD40
Beta-prop_HPS5
Beta-prop_IFT140_1st
WDR90_beta-prop_4th
Beta-prop_DCAF4
Beta-prop_IP5PC_F
Beta-prop_Vps41
Beta-prop_RIG_2nd
Beta-prop_VPS8
Beta-prop_IFT122_1st
Beta-prop_WDR75_1st
Beta-prop_WDR19_1st
Beta-prop_LRRK2
Beta-prop_SCAP
WDR54
PEP5_VPS11_N
Ge1_WD40
DUF5984
Motif
Other DBs
NCBI-GeneID:
110113457
NCBI-ProteinID:
XP_020701717
LinkDB
All DBs
Position
Unknown
AA seq
442 aa
AA seq
DB search
MMELIVASSSVDTGIGCWDLVSGAEQLRYRSSASPPHGLISVSRRFLASSQLRENPSSSS
APIFFWSWEKPQVQVRSFPAEPIGPLVSDSDGSYIIGGGPSGAIYLWEVASGKLLNKWTA
HYRSVTCLTLSDDESLLISGSEDGSIRVWPLLMIFDDIAKESGENIYRYNFSEHALRVTS
VISGHGLCNSIVISSSEDRTCKVWSLSEGRLLRSISFPSIIDAIAMDPGEHIFYAGCRDG
KIYVAALNVEWNPVRNYGKFIIDSLSDNSKAITCLAFSLDGVSLVSGSEDGMIRVWNTKT
GQMTRLLKHAKAPVSNVIIVRQPNKINQVSLSKKLELALMAPPLDKYTESREDGVESKAV
KMIHQISDDLDNSSYCAASVMSSQIKELQQNASTGAVQMELERLRAECKRSMQMVQQWKK
LYNDLQTTFVNELLNGVNVDGS
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atgatggagttgatagtggcatcctcctcggttgatactggtatcgggtgttgggacctc
gtttctggcgccgagcagctccgctatcgttcctctgcctcacctccccatggattaatt
tccgtctccaggcgtttccttgcctcttcacaactccgtgagaacccttcttcctcctcc
gctcccatcttcttctggtcctgggagaagcctcaggtccaggttagaagcttccctgct
gaacctattggtcctctggtttctgattctgatggttcctacatcattggcgggggtcca
tctggtgcaatatatttatgggaggtagcgagtggcaagctcctcaacaaatggaccgca
cactacaggtctgttacttgcctcactctatctgacgatgagtcccttctgatttctgga
tctgaggatggaagcatcagagtttggcctcttttaatgattttcgatgatatagcaaaa
gagtctggagagaatatttacagatacaatttctcagagcacgctttacgggtaacatct
gttatttcaggccatggattgtgtaattcaattgttatctcatcctcggaggatcgcacc
tgcaaggtttggagtttatcggaggggaggttgctaagaagcatttcatttccttccata
attgatgcaattgcaatggatcccggggagcatatattttatgctggttgtagagatggc
aaaatatatgttgccgcacttaatgttgagtggaatcctgttagaaactacggaaaattt
attatagattcattatctgataacagtaaggctataacttgcctagcatttagcttggat
ggtgtctcccttgtatctggatcagaggacggtatgatcagggtttggaacactaaaact
ggacaaatgactcgattgttgaaacatgccaaagctcctgtcagtaacgttattattgtc
agacaacccaataaaattaatcaagtatccttatctaaaaagctcgagctagcgttaatg
gcgccacctttggataagtatactgagtccagagaagatggagttgagagcaaggctgtt
aaaatgattcatcaaatttctgatgacttggataacagcagctactgtgctgccagcgtg
atgagcagtcagataaaagagcttcagcaaaatgcttctactggagctgtacaaatggag
ttggaaagattgagagcagaatgcaagagatctatgcaaatggtccagcagtggaagaag
ttatataacgaccttcagactacctttgttaatgagcttcttaatggagttaacgttgat
ggtagctga
DBGET
integrated database retrieval system
