Dendrobium catenatum: 110113539
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Entry
110113539 CDS
T05027
Name
(RefSeq) phosphomethylpyrimidine synthase, chloroplastic
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
dct
Dendrobium catenatum
Pathway
dct00730
Thiamine metabolism
dct01100
Metabolic pathways
dct01240
Biosynthesis of cofactors
Module
dct_M00897
Thiamine biosynthesis, plants, AIR (+ NAD+) => TMP/thiamine/TPP
Brite
KEGG Orthology (KO) [BR:
dct00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
110113539
Enzymes [BR:
dct01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
110113539
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Paralog
GFIT
Motif
Pfam:
ThiC_Rad_SAM
ThiC-associated
Motif
Other DBs
NCBI-GeneID:
110113539
NCBI-ProteinID:
XP_020701832
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All DBs
Position
Unknown
AA seq
646 aa
AA seq
DB search
MASAYGTPGLGCVLSKSGHITATKLCNTSFFPGFQATRQASKFLEKETCHTFMSCSARAT
LTFDPSTEPSKLKERRHTLDPAAPDFLPLPSFEECFPKSTKEYREVVHEKTGHAFKVPFR
RVHLSGMEKYFDTYDTSGPQNMNPRVGLPKIRKDWIDQREKLDEPRCTQMYYAKKGIITE
EMLFCATRENLDPEFVRSEVARGRAIIPSNKKHLELEPMIVGRNFLVKVNANIGNSAVVS
SIEEEVHKLQWATMWGADTAMDLSTGRYIHETREWILRNSAVPVGTVPIYQALEKVNGIA
EKLTWEIFRDTLIEQAEQGVDYFTIHAGVLLRYIPLTAKRMTGIVSRGGSIHAKWCLAYH
KENFAYEHWDDILDICNQYDVALSIGDGLRPGSIYDANDSAQFAELLTQGELTRRAWEKD
VQVMNEGPGHIPMHKIPENMVKQLDWCNEAPFYTLGPLTTDIAPGYDHITSAIGAANIGA
LGTALLCYVTPKEHLGLPNRDDVKAGVISYKIAAHAADLAKCHPHAQAWDDALSKARFEF
RWLDQFALSLDPMTAMAFHDETLPSEGAKVAHFCSMCGPKFCSMKITEDVRKYADEHGYG
TPEEALKQGMESMSAEFLAASKTISGEQHGEVGGEIYVPEGYATRQ
NT seq
1941 nt
NT seq
+upstream
nt +downstream
nt
atggcatcagcttatgggacaccaggacttggttgtgtgttgagtaagagtggccacatt
actgcaaccaaattatgcaacactagtttcttccctggatttcaagcaacaaggcaagcc
tcaaaattcttggagaaggaaacatgccacacttttatgagctgcagtgcgagagctact
ctgacctttgacccttcaactgaaccctcaaagctaaaagagaggagacacacccttgat
ccagctgctccagatttccttccacttccatcctttgaagaatgctttccaaagagcacg
aaggagtacagggaagttgttcatgagaaaactggccatgccttcaaggtgccatttcga
cgtgtccatctctcagggatggaaaaatactttgatacatatgatactagtggtccgcaa
aatatgaaccctcgtgtaggtcttcccaagatccggaaagattggattgaccaaagagag
aagctagatgaacccagatgcacacagatgtattatgctaagaagggaatcattacagaa
gaaatgctgttctgtgccactcgtgagaatcttgatcctgaatttgtgaggtctgaggtt
gctcgtggaagagctatcatcccctccaacaagaaacacctggaattagaaccaatgatt
gtcggtaggaacttcttagtcaaggtgaatgctaatattggtaactctgctgttgtgagt
tctattgaggaagaggtacataagcttcaatgggccactatgtggggtgctgacacggcc
atggatctgtcaactggtcgctacatccatgagactcgtgaatggattcttcggaattct
gctgtgccggttggaactgttccaatttatcaagcattagaaaaagtgaatggcattgca
gaaaaacttacatgggaaatttttagagatactcttattgaacaggcagagcagggcgtt
gattatttcaccatccatgctggtgtgctgcttcgctacattcctcttacagcaaaacga
atgactggcattgtttcacgaggaggatctattcatgcaaaatggtgtctagcttatcac
aaagagaactttgcatatgagcattgggatgatatccttgacatttgcaatcagtatgat
gtggcactgtctattggtgatggacttaggcctggttctatatatgatgctaatgacagt
gcacagttcgcagagcttttaacacagggtgagctcacacgcagggcttgggaaaaggat
gtgcaggtgatgaatgaaggtccaggacatatccctatgcacaaaattcccgaaaatatg
gttaaacagttggattggtgtaacgaggctccattctatacactaggtcccttgacaact
gatattgctcctggatatgatcatattacctcagccattggagcagccaacattggtgcc
cttggaactgcacttctttgttatgtcacacctaaagaacacctagggctgccaaatcgt
gatgatgtgaaagcaggtgttatatcatacaagatagctgcccatgctgctgacttggcg
aaatgccatccccatgcacaagcatgggatgatgcactaagcaaagcgaggtttgagttt
agatggttggatcagtttgctttatcattggatcctatgactgccatggccttccatgat
gagacacttccgtccgagggtgccaaggttgcacatttctgttcaatgtgtggacctaag
ttctgctctatgaagataacagaagatgttcgcaagtatgctgatgagcatggatatgga
acacccgaggaagctttgaagcagggcatggaatctatgagtgctgaatttcttgctgcc
agcaaaactatcagtggagagcagcatggtgaagttggtggggagatctatgtgcctgaa
ggctatgccacacgccagtaa
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