Dendrobium catenatum: 110113583
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Entry
110113583 CDS
T05027
Name
(RefSeq) protein TSS
KO
K03255
protein TIF31
Organism
dct
Dendrobium catenatum
Brite
KEGG Orthology (KO) [BR:
dct00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
dct03012
]
110113583
Translation factors [BR:
dct03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
110113583
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_10
TPR_12
eIF3_p135
TPR_NPHP3
CLU_N
TPR_2
TPR_MalT
TPR_9
CLU
TPR_8
Caudo_bapla_RBP
Motif
Other DBs
NCBI-GeneID:
110113583
NCBI-ProteinID:
XP_020701883
LinkDB
All DBs
Position
Unknown
AA seq
1961 aa
AA seq
DB search
MAPKGGRGKSKAEKKKKEEKVLPLALDITVKLPDESQVILKGISTDRIVDVRRLLCVNTV
TCCLTSYSVSHEVRGPRLKDTVDVAGLKPCVLTLVEEDYDEDGAIAHVRRLLDVVACVSY
FGAASSQKDGAGAAPKDGKKESAGGGDGGGGETAGSKQNPPRKDATAEVEAEISGACPRL
GAFYEFFSLAHLAPPLQFVRRTTRIRQDDQQPEKDHLFFLEVKLCNGKLVLVEACARGFY
SVGKLRILCHELVDLLRQLSRPFDKAYEDLMNAFLERNKFGNLPYGYRANTWLVPPFSAQ
SPTTFPPLPTEDETWGGNGGGWARDGKSDLIPWASKFRFITAMPCKTTEQRQIRDRNAFL
LHSVFVDVAIFRAIAAIKHVIEVNRVIPSLEEKEILHLEIVGDFSVTVFKDASDASQKVD
TKIDGTRTTGMDCKHLAERNLLKGITADENTAAHDVCTLGVVNIRYCGYVAVVKVNYEER
LEADRPLETLDIEDQPEGSNALNINSLRMLLHKGPASEYKRTSNPSKTSRPEEQSAAQDF
IEKVLIQSLAKLEEEEIDKSIFFRWELGACWVQHLQDQKNAEKDKKQAGDKDRKHAVEKG
RNETKVEGLGKPLKILRNSKKKQDVNEENGKAIDRKSSDIEVAGEVQNFKSIDTLKESKS
TESQCTLKDLLPDSAFMRLKDSETGLHLKSPQELTDMALKFYDEVALSKLVADFGSLELS
PVDGRTLTDFMHTRGLRMRSLGQIVKLSEKLSHVQSLCIHEMIVRAFKHILRAVIAAASE
TGDLALLIAATLNLLLGIPETGNMVHAPEVHPTVWKWLEVFLKKRYGWELTAANYHDVRK
YAILRGLCHKVGIEVAPRDFDINYSLPFNKLDIISLVPVHKQVACSSADGRQLLESSKTA
LDKGKLEDAVSYGTKALAKLIAVCGPYHRMTAGAYSLLAVVLYHTGDFNQATIYQQKALD
INERELGLDHPDTMKSYGDLAVFYYRLQHTELALKYVKRALYLLHLTCGSSHPNTAATYI
NVAMMEEGLGNVHVALRYLHKALKCNQRLLGPDHIQTAASYHAIAIALSLMEAYQLSVQH
EQTTLQILRAKLGPDDLRTQDTAAWLEYFESKAFEQQEAARNGTKKPDASIASKGHLSVS
DLLDYINPSQEIRGRDAESIRKRSLSWKVKNRSSQNLNSPDLDGSYVTSESTNKDEVELV
NELLDRDPEKQAHSVCFEHEHDCSVLEKDIKAVRQSEVASEEQHDAANKIQTEESMDVEE
GWQPVPRSVASGRQRLKQRAPVNGISNNYQRDAPIEPAQTKPRYSYSSSRYYVLKKRTVV
PSSYADYYHSKTQSPGTRFGRKIYKTVAYRIKSASSSINETANIAKFRNEKTKSLVDNDN
NLLSVDMNGQRNLMSEVLESQNNVIVSLGTSPSYKDVALAPPGTIAKIQIWKDPKSKDLN
QKSPTREDEPEVNELLLTENSVEESHVPVDLTNISQEKEDPHNSVLGSTPINSESLTEEK
DESTPYPLFTLENEVEDTYKEEKSLNNGDRESNSAFFSSDVEVASFGGMLSEIVPDSIIS
SDAIHEEICRSDHNVDSASSDVDNCEISEVSVSDESTEKCLMDVLSSSIEPNVNASFHEG
LQNVNPPSNADSYDDKGRLLLDIGEVREPNKKMSALSAAAAPFNPSPTIVLSPIPMNVSL
PSSPIAAVAPWPLNSTLHPGPPSIMPTAPAICGSHHPYYHPAPRPPSIIPPLSFIYPPYS
PPYSQPQPIPSSTFGMNSNVFHPNHFSWHCNMNPSASEFMPGTILPGCHPVEFSVTSTVA
NPISDATLEIINQSDNANIKSSPQGDSNVGETSQKELGEASVPQSEIMVPQDLEAVKQES
VETHGPSDTQTEPKPTVSLKEHADSISEKQSNKKYERDGSFSIFVKGRNRRKQSLRLPIS
LLNKPYGSQSFKCIYNRVVRGSYVARPTEISQNEAPMPSIS
NT seq
5886 nt
NT seq
+upstream
nt +downstream
nt
atggcgcccaagggcggtcgtggcaaatcgaaggccgagaagaagaagaaagaagagaaa
gttcttcctctagctttggacatcacagttaagctccctgacgagtctcaggttattctc
aagggtatttcgacggacaggattgtggacgtacggcgtcttctatgcgtgaacaccgtc
acctgctgcctcacgagctactctgtatcgcatgaggttcgagggccgagattgaaggat
acggttgacgtggccgggttgaagccctgcgtcctcacactcgtcgaagaggactacgac
gaggacggggccatcgcgcacgtgaggcgtctgctggacgttgttgcgtgcgtctcctac
ttcggtgccgcatcttcgcagaaggatggcgccggcgcggcgcccaaagatgggaagaag
gaaagcgccggtggcggcgacggaggaggtggtgaaaccgccgggagtaagcagaatcct
ccacggaaggacgcgacggctgaggtggaggcggagattagcggagcgtgcccgaggctc
ggtgcattctacgagttcttctccctcgcgcatctcgcacctcctctccaatttgtaagg
aggacgacgagaatacggcaggatgatcagcagcctgagaaggatcacctgtttttcctc
gaagtaaagctttgcaatggtaagctggttttggtggaagcatgtgcgaggggtttctac
agcgttgggaaactgcgaattctttgccatgaacttgttgatcttctaagacagcttagt
aggcctttcgacaaggcttatgaagatctcatgaacgcattcttggagagaaataagttt
ggtaatcttccttatggatatcgtgctaatacatggctcgttccaccattttctgcacaa
tcacccacaacatttcctcccctccccacagaggatgaaacatggggaggtaatggtggc
ggatgggctagagatggcaaaagtgatttaattccttgggctagtaagtttcggtttatt
acagctatgccttgcaaaactacagagcaaagacagatcagggataggaatgctttcctg
cttcatagtgtgtttgtagatgttgccatctttagagcaattgcagcaatcaagcatgtt
attgaagtgaaccgtgtgataccatcacttgaggaaaaagaaattctacaccttgagata
gttggagattttagcgtcactgttttcaaggatgcttcagatgcaagccaaaaggtagat
acaaagattgatgggaccagaacaacaggaatggactgtaaacatctggcagagagaaac
ttattaaaaggaatcactgcagatgaaaatacagcagcccatgatgtttgcactttaggt
gttgtcaacataagatactgtggttatgttgcagttgttaaagttaactacgaagaaaga
ttggaagcagatcgcccattagaaactcttgatatagaggaccagcctgaaggatcaaat
gctttgaacattaacagtttgaggatgcttcttcacaaaggccctgcatctgaatacaag
cgaacatcaaatccttcaaagacttccagacctgaagaacaatctgctgctcaagatttc
atagagaaagtgctcattcagagtctagcaaagcttgaagaagaagaaattgataaaagt
atcttctttagatgggaacttggggcctgttgggtacagcatttgcaggaccaaaaaaat
gctgagaaagataagaaacaagctggtgataaggacaggaaacatgctgttgaaaaagga
agaaatgaaaccaaggttgaaggcctcggaaaacctcttaagattcttaggaattccaag
aagaaacaagatgtgaatgaggaaaacggtaaagccattgatagaaaatcttcagacata
gaagttgcgggtgaggtccaaaatttcaagagcattgatactctaaaagagtcaaaatca
actgagagtcaatgcacactcaaagacctgttacctgattcagcatttatgagattgaaa
gattctgaaacaggacttcatcttaagtctccacaggaattaacagatatggctctcaaa
ttttacgatgaagttgctctttccaagctggtcgcagatttcggttcattggaactctca
ccggttgatggtcggacacttactgatttcatgcacaccagaggcctgagaatgcgatct
ttaggccaaattgtaaagctgtcagagaaactgtcacatgtgcaatctctttgtattcac
gagatgattgtaagagctttcaagcacattttgcgagctgtaattgccgctgcttcagaa
actggggacttggctttgttgatagctgcaactcttaacttgcttcttggcattcccgaa
actgggaatatggttcatgctcctgaagttcatcctactgtttggaaatggttggaggtg
ttcttgaagaaaagatatggatgggaacttactgcagcaaattatcatgatgtgaggaag
tatgctattttaagggggttatgccataaggtgggcattgaagttgcaccccgagacttt
gacatcaattattctttgccctttaacaaattagatataattagtttggtacccgtgcat
aagcaagttgcatgctcatcggcagatgggcgtcagctattggaatcatcaaaaacagct
cttgataagggcaaacttgaagatgctgtcagctatggaacaaaggcattggcaaagttg
atagcagtgtgtggtccataccatcggatgacagctggagcttacagtcttcttgctgtt
gttctctaccatactggtgacttcaatcaggccacaatttatcaacaaaaggcattggat
attaatgagagagagctaggattggatcaccctgatacgatgaagagttatggtgacttg
gctgttttctattataggcttcagcatacagaactggctctgaagtatgtgaagcgtgcg
ttgtatcttcttcatctcacttgtggctcttctcacccaaacacagctgctacatatatc
aatgttgcaatgatggaagaaggcctaggaaatgtgcatgtcgcacttagatatctccat
aaagctttaaaatgcaaccagaggttacttggtcctgatcatattcagacggcagcaagt
taccatgctatagccattgcactctccctaatggaagcatatcaactgagtgttcagcat
gaacaaacaaccttgcaaattcttcgagcaaaacttggacctgatgacttacgaactcag
gatactgctgcctggcttgagtactttgagtccaaggcatttgagcaacaagaagctgca
cgcaatggcaccaagaaaccagatgcatctattgccagtaaaggccacctaagtgtatct
gacctgcttgattatataaatccaagtcaagaaatcaggggaagggatgctgagtccata
aggaagagaagcctcagttggaaggtgaaaaaccggtcctcccagaacttgaattcacct
gatttggatggatcttatgtaacttctgagtcaacaaataaagatgaagtagagctagta
aacgaactcctagatagagaccctgagaaacaggctcattctgtatgttttgagcatgaa
catgattgttcggtgttggaaaaggacattaaagctgtcaggcagtctgaagtagcttct
gaggagcaacatgacgctgctaataaaattcaaacagaagaaagtatggatgtggaagaa
ggttggcaacctgttccaaggtcagtagcatcaggcagacagagactcaaacaacgtgca
ccagttaatgggatatcaaataactatcaaagagatgctccaattgaacccgctcaaacc
aaaccaagatattcttattctagtagccgctattatgtattaaagaagagaactgtagtc
cctagtagttatgctgattattaccactcaaaaactcaatcaccgggtactagatttggt
cgtaagatatacaagaccgtggcatatagaataaagtcagcatcatctagcatcaacgag
acagcaaatattgctaaatttcgcaatgagaaaacaaaatcactggtagacaatgataat
aatttgttatcggttgatatgaatggtcagaggaatttgatgagtgaggttttagagtca
cagaataatgtgattgttagccttggaacctctccatcctataaggatgtggctttggca
cccccaggaacaatagctaaaattcagatctggaaggatccaaagtccaaagaccttaat
cagaagtcgccaacaagagaagatgaaccagaggtcaatgagttattattgacagagaat
tctgtagaagagtcccatgtaccagttgatttgacaaacataagccaagagaaagaagac
ccgcacaactcagtacttggtagtaccccaattaattccgaaagcctcaccgaagagaaa
gatgagagtactccatatccattgtttaccttagagaatgaggtggaagatacgtataaa
gaagaaaaatccctgaacaatggcgacagagaaagcaactctgcatttttttcttcagac
gtagaagtggcttcatttgggggtatgctcagtgagattgttccagactctattatttcc
agtgacgcaattcatgaggagatttgcaggagtgatcacaatgttgatagcgcatcttct
gatgttgataattgtgaaatatctgaggtctcagtttctgatgagtcaacagaaaaatgt
ctcatggatgtgctatctagtagcattgagccaaatgtgaatgctagttttcacgagggt
cttcaaaatgttaatcctccaagcaatgctgatagttatgatgacaagggaaggttgtta
ttggatataggtgaagtaagagagcctaacaagaaaatgtctgccttgtctgccgctgca
gcacccttcaacccatctcccacaattgtgctaagtcctattcctatgaatgttagcctc
ccctccagtcccattgcagctgtcgcaccatggcctttgaattccacccttcatccaggg
ccaccctctatcatgcctacagcgcctgctatttgtggttctcatcacccctattatcat
ccagctcctcgtccccctagtatcatacctcctttgtcatttatttatcctccatatagt
ccaccatatagtcaacctcaacctataccaagcagcacatttggtatgaacagtaatgtg
tttcatccaaaccatttttcttggcactgtaatatgaatccaagtgcatctgagttcatg
ccaggaactatattgcctggctgtcatcctgtggaattctctgttacatcaactgttgcc
aatcctatttctgatgccacattagaaataattaatcaatctgataatgctaatattaaa
tcgtcacctcagggggacagcaatgttggagaaacatcccagaaagaactaggtgaagca
tctgttccgcagagtgagattatggtcccacaggatttagaagcagtgaaacaagaatct
gtggaaactcatgggccttctgacactcaaacagagccaaagcctacggtatctttgaaa
gaacatgctgattctatcagtgagaagcagagtaataaaaaatatgagcgtgatggtagc
ttcagcatattcgttaaaggaagaaaccgtagaaagcaatctctaagattgcctattagt
ttgctcaataagccatatggttcacagtcatttaagtgcatttataaccgagttgttaga
ggaagttatgtggccagaccaactgagatatctcaaaacgaagctcccatgcccagcatt
tcatga
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