KEGG   Dendrobium catenatum: 110113617
Entry
110113617         CDS       T05027                                 
Name
(RefSeq) DNA polymerase epsilon catalytic subunit A isoform X1
  KO
K02324  DNA polymerase epsilon subunit 1 [EC:2.7.7.7]
Organism
dct  Dendrobium catenatum
Pathway
dct03030  DNA replication
dct03410  Base excision repair
dct03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:dct00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    110113617
   03410 Base excision repair
    110113617
   03420 Nucleotide excision repair
    110113617
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:dct03032]
    110113617
   03400 DNA repair and recombination proteins [BR:dct03400]
    110113617
Enzymes [BR:dct01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     110113617
DNA replication proteins [BR:dct03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   DNA polymerase epsilon complex
    110113617
DNA repair and recombination proteins [BR:dct03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     DNA polymerase epsilon complex
      110113617
SSDB
Motif
Pfam: DUF1744 POL2_thumb DNA_pol_B_exo1 DNA_pol_B zf-DPOE zf_DPOE_2 DNA_pol_B_exo2 RNase_H_2
Other DBs
NCBI-GeneID: 110113617
NCBI-ProteinID: XP_020701921
LinkDB
Position
Unknown
AA seq 2201 aa
MTGGGRRWESSNSRRNPSKQKLRLSAEEVLESKFGFDLFTEGEKRLGWLLTLASSSWEEQ
GTCNIHSCVDLFFVCQDGSKFKAKYVFQPYFYVATKEKMQLEVDAYLRRRYEGQISNIEI
MEKEDLDLKNHLSGLCGSYLKVSFDTVQQLTHVRNDLLHVVERNQARLGAAEAYESIYGG
KGKERPQDYVDCITDLREYDVPYHVRFAIDNDVRCGQWYDVSVSSRGLIVEKRTDLLQRA
EVHVCAFDIETTKLPLKFPDAEYDQIMMVSYMIDAKGYLIINREFVGADIEDLEYTPKPE
FEGCFNVKNVENEVELLKLWFAHMQEVKPGIYVTYNGDFFDWPFLEKRAAHYGIKMSEEI
GFQHDNIQGECRAKFSCHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVR
FARDKPQTMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMPPDEVLRKGSGTLCEMLLM
VQAYRANVICPNKHREDHEKFHNNRLLESETYIGGHVECLECGVFRADLPTKFQLDSASY
EQLINNLDRDLQYAIRVEGKVDVDSIANYDDVKNAILDKLMLLRDHPMREECPLIYHLDV
AAMYPNIILTNRLQPPSIVSDVVCTACDFNRPGKNCLRKLEWVWRGETYMAKKSDYYHMK
KQIESELVESNESHTPRPFIELPKAEQQLKLKERLKKYCQKAYKRVLDKPVMEVREASIC
MRENPFYVNTVRSFRDRRYEYKGLNKVWKGKLADAKASRNSMKIQEAQDMVILYDSLQLA
HKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLVEKIGRPLELDTDGIWCA
LPGSFPENFTFKIIDANRKFTISYPCVMLNVDVARNNTNDQYQTLMDPITKTYATHSECS
IEFEVDGPYKAMIIPASKEEGILIKKRYAVFNHDGSLAELKGFEIKRRGELKLIKVFQAE
VFDKFLQGLTLEECYAAVAAVANRWLDLLDNQGIDIADGELLDYISESSTMSKSLVDYGE
QKSCAVTTARRLADFLGDTMVKDKGLHCQYIVACEPQGTPVSERAIPVAIFGAEAEIERF
YLRKWCKVSSGVGIRYIVDWSYYKQRLSSAIQKIITIPAAMQKVSNPVPRVLHPEWLHKK
VREKEDRFRQRKLVDIFSTRRKNSNDASVRDLEDIVNSGNSLISGPQVVVLDTKVNKESH
LVKQSFQANGLNMSQEPLIELNHKDASGESIDRNVDYQGWLAIKKRKWKTTLEKRKKRRL
VGMNESHQSAAATKLPVSSVSYKHTREKNGLNSFFRKNELALLKSHWQVIQFVSSTKPGF
FLAWIVVDGVMLKINLDVPRIFYLNSKAPVTEEFPGRRVNKILPHSRPTFNLIEVVIDEE
QFRAESKKLASHLADPEVEGIYETKVPLEFNAVLQIGCVCQVDKVAKARNAQDSWNLTEL
HMKTTTECSYLEQIISFFYLYHSLSEGRAIYVLYFQVSGTISVVIVNPFQNKELSSSLLE
KQFREACQAMSLESHVQASHASAKVEYVRTFEAGEKLVQRVLVEYRHRHHGPTVAVIECP
KVHAIKSGVRVLDDFPCISVPCNTQDSNYQALGWQVTAGKIAMQRCAASSRWFAERIRLS
RYAHVPIGNFELDWLLFTADIFFSRALRDQQQLLWVSDDGIPDLGGIYEGDTCFADEVNQ
PALTYPGAYRRVAVELKVHHLAVNALLKSSLVDEMEGGSLFGYEYDINYGSDANEVSDEA
SSCAPAFRVLKQLIQRCISDAVASGNEYADAILQHLYRWLCSPMSKLHDPALHRVLHKIM
KKVFALLLAEFQKLGATIIFADFSKIIIDTGKLDMLAASAYCDCLIKTLQTRDLFEWIEL
EPLHFWHSLLFMDQHNFGGIQAKSSTDSVAENVDCDSQVDIVSSWSIADYLPKVTQDHFV
LIVSEFLYLPWKHLKAQIANFNIRRDATTSTQSITVSTAETLESSVNEYLKDQISCYFSD
KLLKIVCDTLQHFKGKNNVDVDNTETHVFKHFDSSHSNKGNAALEFIKHVCAVLALDQNV
QNDILRLRKNLLKLVRVREFAPEAQFCDPCLSFTLPNVICSYCNDCRDLDLCRDPTLLDQ
EWRCAVPHCGLPYDLEQMENALLQIVRQRERLYHLQDLVCLKCRQVKAVHLAEQCGCGGQ
FRCVEDSSQFLSKMKVIMSIACRHKLQLLKDCTSWILEVKQ
NT seq 6606 nt   +upstreamnt  +downstreamnt
atgactggaggaggtaggcgttgggaaagttcgaattctcgaagaaatccatcaaagcag
aagctccggctttccgccgaagaggttcttgaaagcaagtttggctttgatctcttcact
gaaggagagaagagactaggatggctgctaaccctcgcttcatcttcatgggaggaacag
ggtacatgtaacatacatagctgcgtggatctattctttgtttgccaggatggatccaaa
ttcaaggctaagtacgtgtttcaaccttatttctatgttgcaaccaaggaaaaaatgcaa
ttagaggtggatgcatatctccgtcggcgctatgaaggccaaatctcaaatattgagatt
atggaaaaagaagatttagatttgaaaaaccatctctcaggtttgtgcggatcatacttg
aaggtaagctttgatacggtccaacaactgacacatgtcaggaatgatctcttacatgtt
gttgaaaggaaccaagcaagattgggtgctgcagaagcatatgaatccatatatggtggc
aaaggcaaggagaggccacaagattatgttgattgtatcactgaccttcgtgaatatgat
gtcccttaccatgttcgttttgcaattgataatgatgttagatgcggacagtggtatgat
gtaagtgtatccagcaggggtctaatagtggaaaaaagaactgatcttcttcaacgagct
gaagttcatgtttgtgcatttgatattgagaccacaaaacttcctctaaagtttccagat
gcggagtatgatcagataatgatggtgtcatatatgatagatgcaaaaggttatctaata
attaatagagagtttgtgggagcagatattgaggatttggaatatacaccaaaaccagaa
ttcgaaggttgttttaatgtgaaaaatgtggaaaacgaggtagagcttctcaaactctgg
tttgcacacatgcaggaggtaaaacctggtatttatgtcacctacaatggtgatttcttt
gactggccgtttttggaaaaacgagctgctcattatgggattaaaatgagtgaggaaata
ggattccagcatgataatattcagggagaatgtcgtgctaaattttcatgccatttggat
tgctttgcttgggtcaaacgtgacagttatctgcctcagggaagccagggtttaaaggct
gtcacgaaagccaagttaggttatgatccattggaggtcaaccctgaagatatggttcgt
tttgcgagggataaacctcagacgatggcttcctattctgtttcagatgctgtggcaact
tactacctttatatgacttacgtccacccgtttattttctcacttgcaaccataattccc
atgcctccggatgaagttctacggaaaggaagtgggaccctatgtgaaatgcttctgatg
gtacaggcatacagggccaacgtgatatgtcccaacaaacatcgggaggatcatgagaaa
ttccacaacaacaggcttctagaaagcgaaacatatattggaggccatgttgaatgcctt
gaatgtggtgtttttagagcagatctacctacaaaatttcagcttgattcagcttcatat
gagcaactaatcaataatcttgatcgtgatctgcaatatgcaatcagagttgaggggaaa
gttgatgttgattctattgcaaactatgatgatgtaaaaaatgctatattggataagctt
atgttgttgcgagaccatccgatgcgtgaggaatgccctttgatctatcatttagacgtt
gctgcaatgtatccaaacatcattttgacaaacagactccagccaccatcaatagtttca
gatgtggtatgcacagcatgtgatttcaatcgtcctggaaagaattgtctccggaagctt
gaatgggtttggcgtggggaaacttacatggcgaaaaaaagtgattattatcatatgaaa
aagcaaatagagtcagaacttgtcgaatcaaatgaaagccatactccaaggccctttatt
gaactgccgaaggcagaacaacagttgaagctgaaagagcgcctgaagaagtactgtcaa
aaggcttataaacgggttcttgacaaacctgtgatggaggttcgagaagccagcatttgc
atgcgggaaaatcccttctatgtcaatacagttcgaagttttcgagatagaagatatgaa
tataaggggctgaacaaagtttggaagggaaaattggcagatgcaaaagccagtagaaat
tcaatgaagatccaggaagcacaggacatggttattctttatgattccttacagcttgct
cataaatgcatactcaattcattttatggttatgtcatgcgcaagggtgcaagatggtac
tcaatggaaatggcaggcgttgttacctacactggggcaaagatcattcaaaatgctcgc
ttgcttgttgaaaagattggaaggccgcttgaactggatacagatggcatctggtgtgct
cttccagggtctttcccggagaacttcacatttaaaataatagatgcaaatagaaagttc
actatttcatatccatgcgtcatgcttaatgttgatgttgcaagaaataacaccaatgat
caatatcagacacttatggaccctattactaagacatatgctacacacagtgaatgctcc
attgagttcgaagtggatggaccttacaaagcaatgatcattccagcttcaaaggaagaa
ggaatcttaattaagaagagatatgcagtttttaatcatgatggaagcttagcggaactg
aaaggttttgaaatcaagcgaagaggggagctgaagctcataaaagtattccaggctgaa
gtttttgacaagtttctgcaaggtttgactttagaggaatgctatgcagctgttgcagca
gtcgctaatcgatggctagaccttttagataatcaagggatagatattgctgatggtgag
ttgcttgattatatatcagaatcaagcaccatgagcaaatctttagttgattatggggaa
cagaaatcttgtgctgtgactactgctcgacgccttgctgattttcttggtgataccatg
gtcaaagacaagggcctacattgtcaatatattgttgcctgtgaaccacagggtactcca
gtaagtgaacgtgctatccctgttgccatatttggagctgaggcagaaatcgaaaggttt
tatctgcgtaaatggtgtaaagtttcatctggtgtgggcattcgatatattgtcgactgg
tcttattataagcagcgtctttcttcagccattcaaaagatcattaccattcctgctgca
atgcagaaggtctctaatcctgttccaagagtgttgcatccggaatggctgcacaaaaaa
gtccgtgagaaggaggatcggtttcgccagcgtaaactagttgatattttcagtacaaga
aggaaaaattcgaatgatgcaagtgttagagacttagaagacattgtaaacagcggaaat
agtttaataagtgggcctcaggttgtagttcttgacaccaaggttaacaaagaaagtcat
ttggtaaaacaatcttttcaagcaaatgggttgaacatgtcacaagagcctttaattgaa
ctgaatcataaagatgcttctggagaaagcattgatagaaatgttgattatcaaggttgg
cttgcgatcaagaaaagaaagtggaaaacaactcttgaaaaaagaaagaagagaagatta
gttggaatgaatgaatcacatcagtctgctgctgctactaaattgcccgtgtcttctgta
agctacaagcatactagagaaaagaatggattgaattcattcttcagaaaaaatgagtta
gcccttcttaaatcgcactggcaggtaatacaatttgtctcaagtacaaaacctggtttc
ttcctggcctggatagtcgtggatggtgtcatgcttaagatcaacctagacgttcctaga
atattttatctcaattctaaagcacctgtgactgaggaatttcctggaagacgtgtgaat
aaaattcttcctcatagtcgacctactttcaatctcatcgaggttgtaattgacgaggaa
caattccgggctgaaagcaaaaaacttgctagtcacttggcagatccagaagttgaggga
atatatgagacaaaggtgcccctagaatttaatgcagtcctccagattggttgtgtttgc
caggtggacaaggttgccaaagctcgaaatgcacaggatagctggaatttaactgagttg
catatgaagacgacgactgaatgctcctatttggaacagattatttccttcttttatttg
tatcatagtttatctgaaggaagggctatttatgtactatattttcaagtatctggaaca
atatctgttgtaattgtcaacccatttcaaaacaaagaactttcttcctctcttcttgaa
aaacaattccgggaagcttgccaagcaatgtccttggaatctcacgttcaggcatcccat
gcatctgcgaaggtggaatatgtgcgtacatttgaagctggggaaaagcttgtgcaaaga
gttttagttgaatacagacatcggcatcatggaccaaccgttgctgtcatagaatgccca
aaggttcatgctatcaaatcaggggtacgtgttctagatgattttccttgcattagcgtt
ccttgcaacacccaggacagcaactatcaggctcttggatggcaagtgacagctgggaaa
attgccatgcaaaggtgtgctgcatcctcccggtggtttgctgaaagaatccgactatcc
agatatgcacatgtgccaataggaaattttgaacttgattggctcttatttacggctgac
atcttcttttctagagcattgcgcgatcagcagcagctactttgggtatctgatgatggc
attccagatttaggaggtatatatgagggagatacatgctttgctgatgaagtcaatcaa
cccgctctcacttatcctggagcatatagaagggtagctgttgaattaaaggttcatcac
ctagctgtaaatgccctacttaaaagtagcctggtcgatgaaatggaaggaggatcattg
ttcggatatgaatatgacataaattatggatcagatgctaatgaagttagtgatgaagct
agctcatgtgcacctgcatttcgagtgcttaagcaattaattcaaagatgtatatctgat
gctgtggcttctggaaatgaatatgctgatgctatattgcagcatctttaccggtggctt
tgtagccccatgtcaaaacttcatgaccctgcacttcatcgagttctacacaagatcatg
aagaaagtatttgctctgcttttggccgagttccagaagctaggagctactatcatcttt
gctgatttctctaagattattatagacactggaaagctagatatgttggcagcaagtgct
tattgtgactgtctgatcaaaaccctacaaacaagggatctttttgaatggattgaactt
gaacctcttcacttctggcattcactgttatttatggatcagcataactttggagggatc
caggcaaaatcatctactgattctgttgcagaaaatgttgattgtgactcacaagtagac
attgtttctagttggagcatagctgattatttgccaaaagtgactcaggaccattttgtt
ttgattgtttctgaattcttatatctcccatggaaacatttaaaagcccaaattgcgaat
ttcaacatcagaagagatgctaccacctctactcagtcaattactgtttcaactgctgaa
actcttgaatcctctgttaacgaatatctgaaagaccagattagctgctatttctctgac
aaactcctgaagattgtttgcgatacacttcagcattttaagggaaaaaacaatgttgat
gttgataatacagaaactcatgtcttcaaacattttgattcctctcattcaaacaaaggc
aatgccgcattagagtttattaaacatgtctgtgctgtacttgcacttgatcagaatgtt
caaaatgatatcctgagattgaggaagaaccttttgaagttagttcgggtgagagagttt
gccccagaagcacaattctgtgacccatgcctatctttcactctgccaaatgtaatttgc
agctattgtaacgactgcagggacctcgacttgtgtcgcgatccaacactcttagaccaa
gaatggcgttgtgccgtaccacactgtgggcttccatacgaccttgaacagatggagaat
gccctccttcagatcgttcgacagagagaaaggctttaccatctacaagatttggtctgc
ctgaagtgcaggcaagttaaggccgtgcacttagccgagcaatgtgggtgcggcggccag
ttcaggtgcgtcgaagattcgtcccaattcttaagcaaaatgaaggttattatgagcatc
gcatgccgccataaactccagctgctcaaggattgcacctcatggatattggaagttaag
cagtaa

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