KEGG   Dendrobium catenatum: 110113629
Entry
110113629         CDS       T05027                                 
Name
(RefSeq) sm-like protein LSM1B isoform X2
  KO
K12620  U6 snRNA-associated Sm-like protein LSm1
Organism
dct  Dendrobium catenatum
Pathway
dct03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:dct00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    110113629
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:dct03019]
    110113629
Messenger RNA biogenesis [BR:dct03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     110113629
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     110113629
SSDB
Motif
Pfam: LSM Hfq
Other DBs
NCBI-GeneID: 110113629
NCBI-ProteinID: XP_020701940
LinkDB
Position
Unknown
AA seq 128 aa
MSWAGLEDLFLSTSLASYLDKKLLVVLRDGRKLLGILRSFDQFANAVLEGACERVIVGDL
YCDISLGLYVIRGENVVLIGELDLERDELPPHMVNVSPAEIRKALKAEREATDLKGSMRK
RMEFLDLD
NT seq 387 nt   +upstreamnt  +downstreamnt
atgtcttgggcaggcctggaggacctctttctgtccacttctctcgcgagttatcttgat
aagaaactccttgtcgtgctacgagatggaagaaaattactgggcatccttcgatctttt
gatcagtttgcaaatgctgttctggaaggggcctgcgagcgagtgattgtaggagatctt
tattgtgatatctctctaggcctgtatgtgatccgtggggagaacgttgtcttgattgga
gagctggaccttgagagagatgaactccctccacatatggtaaatgtttcacctgcagag
ataagaaaggcactgaaagcagaaagggaagctacagatttgaaaggctctatgcgaaaa
cgaatggagttcctcgacctggactag

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