Dendrobium catenatum: 110113787
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Entry
110113787 CDS
T05027
Name
(RefSeq) ISWI chromatin-remodeling complex ATPase CHR11
KO
K11654
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [EC:5.6.2.-]
Organism
dct
Dendrobium catenatum
Pathway
dct03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
dct00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
110113787
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dct03021
]
110113787
03036 Chromosome and associated proteins [BR:
dct03036
]
110113787
Transcription machinery [BR:
dct03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
NoRC (nucleolar remodeling complex)
110113787
Chromosome and associated proteins [BR:
dct03036
]
Eukaryotic type
Chromatin remodeling factors
CHRAC complex
110113787
RSF complex
110113787
WICH complex
110113787
B-WICH complex
110113787
NORC complex
110113787
BRF complex
110113787
NuRF complex (fruit fly)
110113787
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
SLIDE
Helicase_C
ResIII
HAND
HDA2-3
DEAD
Myb_DNA-binding
DBINO
Ribosomal_L27A
AAA_14
ToxN_toxin
Motif
Other DBs
NCBI-GeneID:
110113787
NCBI-ProteinID:
XP_020702142
LinkDB
All DBs
Position
Unknown
AA seq
1084 aa
AA seq
DB search
MAKHAHTEDLSGDTPSSGSMSSSEEDEEQQNEMSADLEDEEELEAVAGTTIQDEEDSQST
EDDRAVGDGDVKTEDEENEQTEETTEKAEIGKREKARLKDMQRMKKQKIQELLDAQNASI
EADMNNKGKGRLKYLLQQTEIFAHFAKGSQSVSDKKPRGRGRHASKLTEEEEDEECLKEE
EDGLGGARGTRLVTQPSCIQGKMRDYQLAGLNWLIRLYENGINGILADEMGLGKTLQTIS
LLGYLHEFRGITGPHMVVAPKSTLGNWMREIRRFCPILRAVKFLGNPEERANIRENLLVA
GKFDVCVTSFEMAIKEKTALRRFSWRYIIIDEAHRIKNENSLLSKTMRLYSANYRLLITG
TPLQNNLHELWALLNFLLPEIFSSAETFDQWFQISGENDQQEVVQQLHKVLRPFLLRRLK
SDVEKGLPPKKETILKVGMSQMQKQYYRALLQKDLEVINAGGERKRLLNIAMQLRKCCNH
PYLFQGAEPGPPYTTGEHLITNAGKMVLLDKLLPKLKERDSRVLIFSQMTRLLDILEDYL
LFQGYKYCRIDGNTGGEERDASIEAFNRPGSEKFIFLLSTRAGGLGINLATADVVILYDS
DWNPQVDLQAQDRAHRIGQKKEVQVFRFCTEYTIEEKVIERAYKKLALDALVIQQGRLAE
QKAVNKDELLQMVRFGAEMVFSSKDSTITDEDIDRIIAKGEEATAELDVKMKKFTEDAIK
FKMDDNAELFVFDDEKEDNKIDFKKLAAENWIEPPKRERKRNYSDTDYFKQAMRQGAPTK
PREPRIPRMPQLHDFQFFNTQRLNELYEKEVRYLMTQQKNQSKDTMTDGDEPDDVGEPLT
AEEQEEKVQLLEEGFTTWTRRDFNAFTRACEKYGRNDIKGISLEMEGKTEEEVERYSKVF
KERYKELNDYDRIIKNIERGEARISRKDEIMRAIGKKLDRYKNPWLELKIQYGQNKGKLY
NEECDRFMLCMVHKLGYGNWDELKSAFRTSPLFRFDWFVKSRTTQELARRCDTLIRLVEK
ENQELDERERQARKDKKLAKKSTPTKRSMMKPPTAENPALASFKRRKQSVMDDYLGSGTK
RGNQ
NT seq
3255 nt
NT seq
+upstream
nt +downstream
nt
atggctaagcacgctcatacggaggatctatcgggcgataccccttccagcggatcgatg
tcctcctccgaggaagatgaggagcaacagaacgagatgtctgcggacctagaggacgag
gaagagctcgaggcagtcgcggggacaacgatccaggatgaggaggactcgcaatcaact
gaggacgatcgtgccgtgggggatggggatgtgaagacagaagacgaggagaatgagcag
actgaagaaacaactgagaaggctgagattgggaagcgggaaaaagccaggctgaaagac
atgcaaagaatgaagaagcagaagattcaagagttattagatgcacagaatgcttccatt
gaagctgacatgaataacaagggaaagggccgactgaagtatctgctgcaacagacagag
atatttgctcattttgctaaggggtctcaatctgtatcagataagaagcctagaggaaga
ggtcgtcatgcttccaaacttactgaagaggaagaagatgaagagtgccttaaggaggaa
gaagatggccttggtggtgctagagggactcgcttggtaacacaaccatcatgtatacaa
gggaaaatgagggattatcaactagctggactgaattggctcatcagattgtatgaaaat
gggatcaatggaattttagctgatgagatgggtcttgggaaaacactacaaaccatttct
ctgttgggttatttgcatgaatttagagggataacaggccctcacatggtggttgctcct
aagtctactcttggcaattggatgagggagatcagacgcttctgtcctattctacgtgct
gtgaagtttcttggaaatcctgaagaaagggcaaatataagggagaacctattagtggct
ggaaaatttgatgtatgtgttactagttttgaaatggccatcaaagagaaaactgctctg
agacgctttagttggcgttacattatcattgatgaggcccatcgtataaagaatgagaat
tctcttctttccaaaacaatgaggctctacagtgcaaactatcggcttctcattaccggt
actcctctccagaacaatcttcatgaactgtgggctcttctaaacttcctacttcctgag
atatttagttcagctgaaacttttgatcaatggttccaaatatctggagaaaatgaccag
caagaggttgttcaacagcttcataaggttttgaggccattcttgcttagaaggctcaag
tctgatgtggaaaaaggtcttccacctaagaaggaaactatacttaaagtagggatgtcc
cagatgcaaaagcaatattatcgcgctctgcttcagaaagatttggaggtcattaatgct
ggtggagagcgcaaacgtcttttaaacattgccatgcagctacgtaaatgctgtaatcat
ccatatttattccaaggtgcagaacctggccctccttatacaactggagagcatcttatt
actaatgcaggaaaaatggtgcttcttgataaattattacccaagttaaaggagcgggac
tctagagttctgatattttcacagatgaccaggcttctggatattttggaggactattta
ctttttcagggttataaatattgtcggattgatggaaatactggcggtgaggaacgggat
gcttcaattgaggcattcaatcgtccaggaagtgaaaaattcattttcttgctttcaaca
agagctggtggcctcggaattaaccttgctactgctgatgttgtcatcctttatgatagt
gattggaatccacaagttgatttacaagcccaagatcgtgcccataggattggccaaaag
aaagaagtccaagtgttccgcttctgcacagagtatactattgaggaaaaagttattgag
agggcttacaagaaacttgcattagatgctttagtgattcaacaaggtcgtttggcagag
cagaaggctgttaataaagatgaattactccaaatggtgcgctttggtgctgagatggta
tttagttccaaggacagcacgataacagatgaagatattgatcgtattatagctaaagga
gaggaggcaactgctgaacttgatgtgaagatgaaaaagtttactgaggacgcaatcaag
tttaaaatggatgacaatgctgagttgtttgtctttgatgatgagaaggaggacaacaaa
attgacttcaaaaagctggctgctgagaactggattgaacctccgaaaagagaacggaag
cgcaattactccgacacggactacttcaagcaagcaatgcgacaaggagctccaacgaaa
cccagagaaccacgaattcctcgcatgcctcaattgcatgactttcagttctttaatacg
cagaggttaaatgagctatatgaaaaggaagttcggtacctcatgacacaacaaaagaat
cagtcaaaagacacgatgactgatggtgatgagccggatgatgttggtgaaccattgact
gcagaggaacaggaagaaaaagtgcaattgttagaggagggcttcacaacatggacaagg
agagattttaatgcattcactcgagcatgtgaaaaatatggtcgtaatgatatcaaaggt
atatctttggaaatggagggtaaaacagaagaggaggttgagcgatattccaaagtcttc
aaagaaagatataaggaattgaatgactacgaccgaataattaagaatattgaaagaggt
gaagcaagaatttcacgaaaggatgaaataatgagagctataggaaagaagttggaccgc
tataagaacccatggttggagctaaagattcaatatggacagaacaaaggaaaattgtac
aatgaagaatgtgatcgtttcatgttatgcatggtgcacaaacttggttatggaaactgg
gatgaattgaagtcagcttttcgtacttcacccttgttccgatttgactggtttgtgaag
tcccgtacaactcaagaacttgctaggcgatgcgataccctaatccgtttggtggagaag
gaaaatcaagaacttgatgagagggagcggcaagctcggaaagataaaaaactcgctaag
aagtcaacaccaacaaagaggtccatgatgaagccaccaactgcagagaaccctgctttg
gcctcctttaagaggcgaaaacaatcagttatggatgattatcttggttctggtactaaa
agaggaaaccagtga
DBGET
integrated database retrieval system
