Dendrobium catenatum: 110114380
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Entry
110114380 CDS
T05027
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 53
KO
K16911
ATP-dependent RNA helicase DDX21 [EC:
5.6.2.7
]
Organism
dct
Dendrobium catenatum
Brite
KEGG Orthology (KO) [BR:
dct00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
dct03009
]
110114380
03036 Chromosome and associated proteins [BR:
dct03036
]
110114380
Enzymes [BR:
dct01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
110114380
Ribosome biogenesis [BR:
dct03009
]
Eukaryotic type
Pre-60S particles
Helicases
110114380
Chromosome and associated proteins [BR:
dct03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
110114380
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
AAA_30
Motif
Other DBs
NCBI-GeneID:
110114380
NCBI-ProteinID:
XP_020702898
LinkDB
All DBs
Position
Unknown
AA seq
658 aa
AA seq
DB search
MATALFFFTPSSAVISFPPQNPNLNILLTRSSPLAIPVSANPNVIPRRWSAVPFLSAKAL
RTAVPTIPVEGELLDISKIGISEQIVTALSHRGITELFPIQRAVLEPAMEGRDMIGRAIT
GSGKTLAFGIPILDKIIRDQTQSWKKRVPSALVLAPTRELARQVQREFKISAPNLQSTCI
YGGIPIMSQVRALGYGMDIVVGTPGRIIDLFERGALDLSEVKFVVLDEADQMLAVGFQED
VERILSYLPRKKQCMLFSATMPQWIHDLSRKYLRDPVIVDLVGDSDQKLAEGISLYSVSS
TSPNKQNLLPTLISMYAQGGKSIIFTKTKRDAESLSRSMGVVIGSKALHGDMQQSQRDKT
LAAFRDGRFRALVATDVAARGLDIPNVDLVIHFEIPNTPDIFLHRSGRTGRAGNKGTTVL
MFTEGQRRTVRSIEQDLGCKFEELRGITGEGGKRSSDRYDDNSWLSEDGSDDNAQYGNYR
RSPKPNNYRSSESNFRSQSYYSDNSRYGNNERFKKFNSYGNSQDYSRNQSPESDNSQYEN
HGRFRKLNSNGNSQNSFRNQSHDSVHAQYGNNGRFRSQGSPRKNKFSKPYQSVLDQNSTN
RSSFSLDSLDHWNESNTDEKFDFPAESTRSKRTYGSRKHHQKKSETDNDNFDSLFDLF
NT seq
1977 nt
NT seq
+upstream
nt +downstream
nt
atggcaaccgcactcttcttcttcactccctcctccgccgtcatctccttcccgccccaa
aaccctaatctcaatattctcctcactcgctcctcgcctctcgccattcccgtctcagct
aatcctaatgtcatccctcgcagatggtcggctgttccgtttctcagcgcgaaggcgctc
cgcaccgccgttccaaccatacctgtcgaaggagagctcctcgacatctcgaagatcggc
atatcggagcagatcgttactgctctctctcaccgcggcatcactgaactgttccctatt
cagagagctgtcttggagcctgcaatggaaggccgtgatatgattggaagggctataact
ggatcaggaaaaactcttgcatttggtattcccatattggataaaattatccgggatcag
actcaaagctggaaaaaacgagttccctctgctcttgtattggcgcctacacgtgaactg
gcacgtcaggtgcaaagggagttcaaaatttcagctccgaatttgcaaagtacttgcatt
tatggtggaataccaattatgagccaagtgcgtgctcttggatatggcatggatattgtt
gttggaacaccgggaagaattattgacttatttgaaaggggtgccttagatctttctgaa
gtaaaatttgttgtgttggatgaagctgatcagatgttagcagtaggctttcaggaggat
gttgaacgtattttaagttacctacctagaaagaaacaatgcatgctgttttctgcaacg
atgcctcaatggattcatgatctgtcaaggaagtatttgagagatcctgtaatagtagat
cttgttggagactctgatcagaagttagctgagggtatctcactctattctgtttcctca
acctctcctaacaagcaaaatctccttcccactttgatttcaatgtatgctcaaggtggt
aaaagtattattttcaccaaaacaaagagagatgcagagtcactctcaaggtccatggga
gttgtaattgggagcaaagcattgcatggagacatgcagcagtcgcaaagggacaaaact
cttgctgctttccgtgatggacggtttcgtgcattagttgctacagatgttgctgcacgt
ggtcttgatatccctaatgttgatctggttattcattttgaaattccaaacactcccgat
atttttcttcatagatctggcagaactggtcgtgctggtaataaagggaccacagtactt
atgttcactgaaggtcaacgtcgtacagtcagaagcattgagcaggatttaggatgcaaa
tttgaggagctgcgaggcattactggtgaaggtggaaaaaggagctctgacaggtatgat
gataattcttggctgtccgaagatggctcggatgataatgctcaatatggaaattataga
cggtccccaaagcctaacaattatagaagctctgaaagtaacttcagaagtcaatcttat
tattctgataattcacgttatggaaataatgagagatttaaaaagttcaactcttatgga
aattctcaagattactcaagaaatcaatctcctgaatccgataattcacagtatgaaaat
catgggagattcagaaagttaaactctaatggaaattctcaaaatagtttcagaaatcaa
tctcatgactctgttcatgcccagtatggaaataatgggagatttagaagccagggaagt
cctagaaaaaacaaattttcaaagccctaccagtctgttcttgatcagaattcaacaaac
agaagttccttttcattggatagcttagatcactggaatgaaagcaatacagatgagaaa
tttgattttcctgcagaatctacaagatcaaaaaggacatatggctctcgtaaacatcat
cagaagaaatcagaaactgataatgataatttcgattccttgtttgatttgttttga
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