Dendrobium catenatum: 110115158
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Entry
110115158 CDS
T05027
Name
(RefSeq) ruBisCO large subunit-binding protein subunit beta, chloroplastic
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
dct
Dendrobium catenatum
Pathway
dct03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dct00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
110115158
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dct03019
]
110115158
03110 Chaperones and folding catalysts [BR:
dct03110
]
110115158
03029 Mitochondrial biogenesis [BR:
dct03029
]
110115158
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
dct04147
]
110115158
Enzymes [BR:
dct01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
110115158
Messenger RNA biogenesis [BR:
dct03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
110115158
Chaperones and folding catalysts [BR:
dct03110
]
Heat shock proteins
HSP60 / Chaperonin
110115158
Mitochondrial biogenesis [BR:
dct03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
110115158
Exosome [BR:
dct04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
110115158
Exosomal proteins of other body fluids (saliva and urine)
110115158
Exosomal proteins of breast cancer cells
110115158
Exosomal proteins of colorectal cancer cells
110115158
Exosomal proteins of bladder cancer cells
110115158
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-GeneID:
110115158
NCBI-ProteinID:
XP_020703956
LinkDB
All DBs
Position
Unknown
AA seq
611 aa
AA seq
DB search
MAATFNTVSTFGSLAASGLAADNKFVSSSGKLSQFSSLASISSHPLSGRRKKLNLQKRCN
TDISAMAKELYFNKDGSAIKKLQTGVNKLADLVGVTLGPKGRNVVLESKYGSPKIVNDGV
TVAKEVELEDPVENIGAKLVRQAASKTNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPV
QITRGIEKTSKALVSELKLISKEVEDSELADVAAVSAGNNYEIGNMIAEAMSKVGRKGVV
TLEEGKSAENSLYVVEGMQFDRGYISPYFVTDSEKMSVEYENCKLLLVDKKVTNARDLIN
VLEDAIRGGYPIVIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAIL
TGATVIRDEVGLTLDKAEKEVLGTAAKVVLTKDSTTIVGDGSTQEAVNKRVSQIRNLIEV
AEQDYEKEKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEGIVVGG
GCTLLRLASKVDAIKETLENEEQKVGADIVKRALSYPIKLIAKNAGVNGSVVVEKVLSND
NPKYGYNAATGKYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLTSDVVVVDIKEPEPAPA
GNPMDNSGYGY
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
atggcagccactttcaatacagtgtcgacatttggctctttggctgccagtggccttgcg
gcagacaataaattcgtatcctcttctgggaagttatcccaattctcttctttagcttct
atttcttcccatcctctcagtggcagaaggaagaagctgaatttgcagaagagatgtaac
actgacatcagtgctatggctaaggagttatatttcaacaaggatgggtcagctattaag
aagttacaaactggtgtcaacaagcttgcggatcttgttggagttactcttggcccaaag
ggtaggaatgttgttctggagagcaagtatggatcgcctaagattgtaaatgatggtgtt
acagtggcaaaggaggttgagttggaagacccggttgaaaacattggtgctaagctggtc
aggcaagctgcttctaaaactaatgaccttgctggtgatggtaccacaacttctgtagtc
ctggctcaaggtttaattgctgaaggcgttaaggtggttgcagcaggtgccaatcctgtt
caaatcactagaggaatagaaaaaacttcaaaagctctagtatctgaactcaaactaatc
tccaaagaggttgaagacagtgaacttgctgatgttgctgcagtgagtgctggaaacaac
tatgaaattggaaacatgatagctgaggctatgagcaaagtgggaaggaagggtgtggtg
acacttgaagagggcaaaagtgcagagaatagcctctatgttgtggaaggaatgcaattt
gatcgtggctatatctctccttattttgtaacggacagtgagaagatgtctgttgaatat
gagaattgcaagctgcttcttgttgacaagaaagttacaaatgcaagagatttgatcaat
gtcctcgaggatgcaattagagggggatatcctatcgttataattgcagaagatattgaa
caggaagctctggcaactctcgttgtaaacaagctaagaggtgctttgaagattgctgct
ctaaaagctcctggatttggagagcgcaaaagtcaataccttgatgacattgcaatcctt
actggagcaactgtcataagagatgaggttggccttacactggataaagctgaaaaagag
gtgttgggtactgctgcaaaggttgtgctaaccaaagattcaacgaccatagtaggtgat
gggagcacacaggaagcagtaaataagcgagtttcacaaattagaaacttgattgaggta
gctgaacaggattatgagaaagagaaactgaacgagaggattgccaaactttctggtggt
gttgcggtcattcaggttggagcacaaacagagacggagctcaaagagaagaagttgaga
gttgaagatgccctgaatgcgactaaggctgcagttgaggaaggtattgttgttggtggt
ggctgtaccctcctgaggctagcttcaaaggttgacgcaattaaggaaactcttgaaaat
gaagagcagaaggttggagcagatattgttaagagagccctgagctatcctattaaattg
attgcaaaaaatgctggtgtgaatggaagtgttgtggttgagaaagtgctttctaacgac
aatcccaagtatggctacaatgctgctaccggaaagtatgaggatttgatggctgcagga
attattgatcccactaaggttgtgaggtgctgcttggaacatgcatcatccgtcgcaaag
acattcctgacctccgacgtggtggtggtcgacatcaaggagcccgagccagctccggcc
ggcaacccaatggacaattcaggttatggctactaa
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