Dendrobium catenatum: 110115329
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Entry
110115329 CDS
T05027
Name
(RefSeq) THO complex subunit 5A isoform X1
KO
K13174
THO complex subunit 5
Organism
dct
Dendrobium catenatum
Pathway
dct03013
Nucleocytoplasmic transport
dct03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dct00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110115329
09122 Translation
03013 Nucleocytoplasmic transport
110115329
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dct03019
]
110115329
03041 Spliceosome [BR:
dct03041
]
110115329
Messenger RNA biogenesis [BR:
dct03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
110115329
Spliceosome [BR:
dct03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
110115329
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FmiP_Thoc5
PLS
Motif
Other DBs
NCBI-GeneID:
110115329
NCBI-ProteinID:
XP_020704193
LinkDB
All DBs
Position
Unknown
AA seq
781 aa
AA seq
DB search
MEVEAEPAFVKTAQEALDETRRALEEIAAKILFVKKEGKPKSELRELSTQMSILFITLRQ
LNRTILVEEDRIKAETESAKAPVDFTTLQLHNLMYEKNHYLKAINTCRDFRSKYSDIELV
PEEEFLKNAPEDIKEKVLASDAAHDLMLKRFNYELFQRKELCKLREKLEQHKKSLVETIA
SRKKFLSSLPSHLKSLKKATLPVQQQLGILHSKKLKQHCAAELLPPPLYIVYSQLLAQKE
AFGEKIEMEITGSVKDAQTFSQRQASRENGTSTNIESIRLDDDAPDEEEDVQRRRKRLKK
NLPKENGDQGGIQQTHPLKVFVHIFEDDLQPKSPKLMSLKFEYLIKLNVVCVGVEDPEQA
SDENILCNLFPNDTGTELPHQTAKLYAGDFVVFGDKSTRPYMWAQHLAGMDFLPEVPPLQ
QHSENLKTEARSANVSSGLSLYRRENRVQTVLQRIRSRKKALMALVEQLNFLVKLKWPLL
DNENVPWALHTPLCNLQQWLPVRPVVDSSVSAVTAEKLVGSVGHELDRRSVPPSEIESAR
EDGELPMALPATVFPDDSSTKISNVSSDLESSRSLTLISKNITPPKMVKSSSFGRHEDDL
DLILDMESDVEEKVCIESETDIVGATEKPWVDHAAREFHLVLCRKDGNEQMLKLEATVKI
SIEYPLRAPFFKLRLSPDGSQDSFECFNELRAMESEVNLHILNILSVDSENYVLAHQIRC
LAMLFDLHFNTAHEKRKSNSVVDAGLYIPFNDNLLGRVVRGRDRRRMLSWKRVGRNNHSS
C
NT seq
2346 nt
NT seq
+upstream
nt +downstream
nt
atggaagtggaggcggagccggcgtttgtgaagacggcacaagaggcgctagatgagact
cgtagagcattggaggagatcgcggcgaagattctcttcgtcaagaaggaaggcaagccc
aaatctgagctccgggagctcagcacccaaatgtccatcttgttcatcaccctccgtcag
ttgaaccgaaccatattggtggaagaagaccgcataaaagctgaaacagagagtgcaaag
gcaccggtggactttacaacgttgcagcttcataacttgatgtatgagaagaatcattac
ctgaaagccataaatacatgcagagattttaggtcgaagtattctgatatagaacttgtc
cctgaagaagagttcttaaaaaatgcaccagaagatattaaagaaaaagttctggctagt
gatgcagctcatgatttgatgctgaaaagatttaactatgagctttttcagaggaaagag
ttgtgcaagcttcgtgagaagttggagcaacacaaaaaaagccttgtagagaccatagca
agccggaaaaaattcctttcaagcctaccatcacatctgaaatctttgaagaaggcaacg
ttacctgtacagcagcagctagggattctgcattccaagaagctaaagcagcattgtgca
gctgagctgctgccacctcctctttatattgtttactcacaattattggctcagaaagaa
gcttttggtgagaagattgagatggagatcactggaagtgtaaaagatgctcaaactttt
tctcaacggcaagcaagcagggaaaatggtacatcaactaatatagaaagcatccggttg
gatgatgatgcacccgacgaagaggaagatgttcagagaagaagaaagagactgaagaag
aacctgcctaaagaaaatggagaccaaggaggaatacagcaaactcatccactcaaagtt
tttgtccacatttttgaagatgatctccagcctaaatctccaaagcttatgtccctgaag
tttgagtatttaataaaattgaatgttgtatgtgttggggttgaagatcctgagcaagct
tctgatgaaaatattttgtgtaacctttttcccaatgacactggcacagaacttccacat
cagacagctaagctatatgctggagattttgtagtatttggtgataaaagtactcgacca
tacatgtgggcacagcatttagctggcatggatttcttgcctgaggtgcctcctctccaa
caacatagcgaaaatctgaagactgaagcgagaagtgccaatgtatcttctggactctct
ctttatcgtcgtgagaaccgagtgcagactgttttgcaaaggatccgttctaggaaaaag
gctcttatggctcttgtggagcagctcaatttcttggtgaagctcaaatggcccttgtta
gataatgaaaatgttccctgggccttgcacacccctctttgtaatttgcagcaatggttg
ccagtaagacctgttgttgattcctcagtatctgctgttactgctgaaaaacttgtaggt
tcagtaggccatgagcttgacagaagatcagttcctccatcagaaatagagagtgcaagg
gaagatggggaacttccaatggcactaccagctactgtatttccagatgattcaagtaca
aagatttctaatgtttcttctgaccttgagagttctagaagcctgactctgatttcaaaa
aacatcacaccacccaagatggtcaagtcgtcaagtttcggtcggcatgaagatgatttg
gatcttatactggatatggagagtgatgtggaggagaaagtgtgcattgagtcagaaacc
gatattgttggtgccacagagaaaccatgggtagaccatgctgcaagagaattccattta
gttctgtgtagaaaggatggaaacgagcagatgctaaagttggaagctacggtcaagatc
agtatagaataccctctcagggccccatttttcaagttaagattatcaccagatggttct
caagatagttttgaatgctttaatgaacttcgcgccatggagtcagaggtgaatctccat
attctcaatattttgtctgttgacagtgaaaattacgttttagctcaccaaattcgttgc
ttggctatgctctttgatttgcattttaatacagcacatgaaaaaagaaaaagtaattct
gtggttgatgctggactttatataccatttaatgataatctacttgggagggttgtgaga
ggtagggatcgcagaaggatgctttcttggaagcgcgttggaagaaataatcacagttct
tgttga
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